Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
NID1P14543 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
NID1P14543 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
NID1P14543 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
NID1P14543 RNU7-119P-201ENST00000459279 63 ntBASIC1.21□□□□□ -2.22
NID1P14543 RNA5SP94-201ENST00000516917 108 ntBASIC1.21□□□□□ -2.22
NID1P14543 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
NID1P14543 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.21□□□□□ -2.22
NID1P14543 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
NID1P14543 CYP3A54P-201ENST00000566950 75 ntBASIC1.2□□□□□ -2.22
NID1P14543 SNORA9.1-201ENST00000362412 131 ntBASIC1.19□□□□□ -2.22
NID1P14543 RNU1-124P-201ENST00000363861 145 ntBASIC1.19□□□□□ -2.22
NID1P14543 Y_RNA.325-201ENST00000365171 122 ntBASIC1.19□□□□□ -2.22
NID1P14543 Y_RNA.540-201ENST00000384638 111 ntBASIC1.19□□□□□ -2.22
NID1P14543 SNORA41B-201ENST00000384785 128 ntBASIC1.19□□□□□ -2.22
NID1P14543 AL021921.1-201ENST00000442774 93 ntBASIC1.19□□□□□ -2.22
NID1P14543 RNA5SP404-201ENST00000517118 132 ntBASIC1.19□□□□□ -2.22
NID1P14543 Y_RNA.379-201ENST00000365653 102 ntBASIC1.18□□□□□ -2.22
NID1P14543 MIR516B1-201ENST00000385211 90 ntBASIC1.18□□□□□ -2.22
NID1P14543 SNORA70.25-201ENST00000612741 95 ntBASIC1.18□□□□□ -2.22
NID1P14543 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.17□□□□□ -2.22
NID1P14543 RPS29P1-201ENST00000465274 159 ntBASIC1.17□□□□□ -2.22
NID1P14543 MIR548AD-201ENST00000584780 82 ntBASIC1.17□□□□□ -2.22
NID1P14543 RNU6-1246P-201ENST00000391064 107 ntBASIC1.16□□□□□ -2.22
NID1P14543 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.16□□□□□ -2.22
NID1P14543 RNA5SP222-201ENST00000411039 105 ntBASIC1.16□□□□□ -2.22
NID1P14543 RNU6-518P-201ENST00000516056 96 ntBASIC1.16□□□□□ -2.22
NID1P14543 AC243829.6-201ENST00000612652 106 ntBASIC1.16□□□□□ -2.22
NID1P14543 MIR6515-201ENST00000619843 57 ntBASIC1.16□□□□□ -2.22
NID1P14543 MIR20A-201ENST00000362279 71 ntBASIC1.15□□□□□ -2.23
NID1P14543 RNA5SP325-201ENST00000363756 130 ntBASIC1.15□□□□□ -2.23
NID1P14543 RNU6-939P-201ENST00000384634 107 ntBASIC1.15□□□□□ -2.23
NID1P14543 AC244090.1-201ENST00000441884 93 ntBASIC1.15□□□□□ -2.23
NID1P14543 RNU6-231P-201ENST00000517122 103 ntBASIC1.15□□□□□ -2.23
NID1P14543 MIR4752-201ENST00000579672 72 ntBASIC1.15□□□□□ -2.23
NID1P14543 MIR520E-201ENST00000384867 87 ntBASIC1.14□□□□□ -2.23
NID1P14543 Y_RNA.74-201ENST00000362911 99 ntBASIC1.13□□□□□ -2.23
NID1P14543 RNU4-88P-201ENST00000411220 86 ntBASIC1.13□□□□□ -2.23
NID1P14543 HMGN2P22-201ENST00000427588 175 ntBASIC1.13□□□□□ -2.23
NID1P14543 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
NID1P14543 MIR5706-201ENST00000579841 80 ntBASIC1.13□□□□□ -2.23
NID1P14543 AC022709.1-201ENST00000615967 87 ntBASIC1.13□□□□□ -2.23
NID1P14543 MIR6779-201ENST00000617283 64 ntBASIC1.13□□□□□ -2.23
NID1P14543 SNORD116-16-201ENST00000384533 92 ntBASIC1.12□□□□□ -2.23
NID1P14543 SNORD2-201ENST00000459163 69 ntBASIC1.12□□□□□ -2.23
NID1P14543 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.12□□□□□ -2.23
NID1P14543 AC243829.3-201ENST00000622177 108 ntBASIC1.12□□□□□ -2.23
NID1P14543 AC090617.8-201ENST00000623339 167 ntBASIC1.12□□□□□ -2.23
NID1P14543 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
NID1P14543 MIR527-201ENST00000385244 85 ntBASIC1.11□□□□□ -2.23
NID1P14543 MIR1255B2-201ENST00000408618 67 ntBASIC1.11□□□□□ -2.23
NID1P14543 AL353765.1-201ENST00000605514 183 ntBASIC1.1□□□□□ -2.23
NID1P14543 PVT1_3.1-201ENST00000620853 95 ntBASIC1.1□□□□□ -2.23
NID1P14543 RNU6-753P-201ENST00000363926 107 ntBASIC1.09□□□□□ -2.23
NID1P14543 RNU1-93P-201ENST00000364704 169 ntBASIC1.09□□□□□ -2.23
NID1P14543 SNORD116.2-201ENST00000391251 93 ntBASIC1.09□□□□□ -2.23
NID1P14543 MIR519A2-201ENST00000384990 87 ntBASIC1.08□□□□□ -2.24
NID1P14543 RNU1-29P-201ENST00000606574 126 ntBASIC1.08□□□□□ -2.24
NID1P14543 SNORD114-26-201ENST00000363543 72 ntBASIC1.07□□□□□ -2.24
NID1P14543 Y_RNA.282-201ENST00000364793 102 ntBASIC1.07□□□□□ -2.24
NID1P14543 SNORD114-29-201ENST00000364819 70 ntBASIC1.07□□□□□ -2.24
NID1P14543 SNORA36.2-201ENST00000384004 127 ntBASIC1.07□□□□□ -2.24
NID1P14543 U7.6-201ENST00000610841 64 ntBASIC1.07□□□□□ -2.24
NID1P14543 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.07□□□□□ -2.24
NID1P14543 MIR7110-201ENST00000612638 86 ntBASIC1.07□□□□□ -2.24
NID1P14543 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
NID1P14543 RNA5SP517-201ENST00000364724 117 ntBASIC1.06□□□□□ -2.24
NID1P14543 AC069271.1-201ENST00000445577 156 ntBASIC1.06□□□□□ -2.24
NID1P14543 RNA5SP436-201ENST00000516020 115 ntBASIC1.06□□□□□ -2.24
NID1P14543 MIR151B-201ENST00000584249 96 ntBASIC1.06□□□□□ -2.24
NID1P14543 MIR6767-201ENST00000637302 66 ntBASIC1.06□□□□□ -2.24
NID1P14543 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
NID1P14543 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
NID1P14543 MIR548J-201ENST00000408833 112 ntBASIC1.05□□□□□ -2.24
NID1P14543 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.04□□□□□ -2.24
NID1P14543 RNY1P8-201ENST00000383970 114 ntBASIC1.04□□□□□ -2.24
NID1P14543 RNU6-980P-201ENST00000516925 103 ntBASIC1.04□□□□□ -2.24
NID1P14543 RNU6-1223P-201ENST00000517124 104 ntBASIC1.04□□□□□ -2.24
NID1P14543 MIR6788-201ENST00000618842 66 ntBASIC1.04□□□□□ -2.24
NID1P14543 SNORA2A-201ENST00000383885 135 ntBASIC1.03□□□□□ -2.24
NID1P14543 RNU6-246P-201ENST00000384702 107 ntBASIC1.03□□□□□ -2.24
NID1P14543 MIR598-201ENST00000384868 97 ntBASIC1.03□□□□□ -2.24
NID1P14543 MIR140-201ENST00000385282 100 ntBASIC1.03□□□□□ -2.24
NID1P14543 RNU7-154P-201ENST00000516194 62 ntBASIC1.03□□□□□ -2.24
NID1P14543 SNORA40.16-201ENST00000517238 121 ntBASIC1.03□□□□□ -2.24
NID1P14543 SNORA25.18-201ENST00000607153 114 ntBASIC1.03□□□□□ -2.24
NID1P14543 MIR6773-201ENST00000612812 74 ntBASIC1.03□□□□□ -2.24
NID1P14543 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.25
NID1P14543 RNU6-337P-201ENST00000391243 106 ntBASIC1.02□□□□□ -2.25
NID1P14543 RNU6-229P-201ENST00000516614 102 ntBASIC1.02□□□□□ -2.25
NID1P14543 RNU7-188P-201ENST00000517063 64 ntBASIC1.02□□□□□ -2.25
NID1P14543 MIR429-201ENST00000362106 83 ntBASIC1.01□□□□□ -2.25
NID1P14543 SNORD115-25-201ENST00000362619 82 ntBASIC1.01□□□□□ -2.25
NID1P14543 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
NID1P14543 ACA64.5-201ENST00000516207 127 ntBASIC1.01□□□□□ -2.25
NID1P14543 RNA5SP470-201ENST00000516463 106 ntBASIC1.01□□□□□ -2.25
NID1P14543 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
NID1P14543 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
NID1P14543 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1□□□□□ -2.25
NID1P14543 SNORD118-201ENST00000363593 134 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 221.5 ms