Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RNU6-589P-201ENST00000516485 107 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 SNORA18.5-201ENST00000516616 101 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 MIR378F-201ENST00000578143 78 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 MIR4441-201ENST00000582623 100 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 AC103810.7-201ENST00000607821 91 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 AC093726.3-201ENST00000637588 150 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 RNU6-476P-201ENST00000384726 107 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
COL11A1P12107 SNORD75.2-201ENST00000408784 58 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 snoU13.13-201ENST00000458842 104 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 RNA5SP461-201ENST00000516451 104 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 SNORD38.3-201ENST00000516599 73 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 RNA5SP66-201ENST00000517178 101 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 YWHAEP3-201ENST00000582767 121 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 MIR3140-201ENST00000583685 90 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 MIR6851-201ENST00000617060 67 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 AC132825.6-201ENST00000638861 357 ntBASIC-0.24□□□□□ -2.45
COL11A1P12107 RNU6-624P-201ENST00000363411 107 ntBASIC-0.25□□□□□ -2.45
COL11A1P12107 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.25□□□□□ -2.45
COL11A1P12107 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.25□□□□□ -2.45
COL11A1P12107 MIR590-201ENST00000385008 97 ntBASIC-0.25□□□□□ -2.45
COL11A1P12107 AL691482.2-201ENST00000457453 84 ntBASIC-0.25□□□□□ -2.45
COL11A1P12107 SNORD114-14-201ENST00000362723 75 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 RNY4P27-201ENST00000363341 96 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 RNU6-260P-201ENST00000384092 107 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 SNORA24B-201ENST00000384176 131 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 RNU6-880P-201ENST00000384526 107 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 MIR203A-201ENST00000384836 110 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 MIR1285-2-201ENST00000408311 88 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 MIR1236-201ENST00000408340 102 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 RNU6-721P-201ENST00000410155 105 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 RNU6-284P-201ENST00000411105 106 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 MTATP8P2-201ENST00000435212 202 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 AP001318.4-201ENST00000616637 121 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 AC090617.8-201ENST00000623339 167 ntBASIC-0.26□□□□□ -2.45
COL11A1P12107 RNU6-834P-201ENST00000362367 110 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 MIR519C-201ENST00000385053 87 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 RNU6-554P-201ENST00000410466 106 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 RNU6-274P-201ENST00000459566 107 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 RNU6-904P-201ENST00000516206 101 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 SNORD22.1-201ENST00000516331 125 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 RNA5SP169-201ENST00000517268 117 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 CYP3A54P-201ENST00000566950 75 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 MIR3064-201ENST00000581130 66 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 MIR6773-201ENST00000612812 74 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 MIR518B-201ENST00000385127 83 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
COL11A1P12107 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 U7.3-201ENST00000616123 62 ntBASIC-0.27□□□□□ -2.45
COL11A1P12107 SNORD116-22-201ENST00000384430 92 ntBASIC-0.28□□□□□ -2.45
COL11A1P12107 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
COL11A1P12107 SNORA3B-201ENST00000391305 131 ntBASIC-0.28□□□□□ -2.45
COL11A1P12107 AL606753.1-201ENST00000427435 87 ntBASIC-0.28□□□□□ -2.45
COL11A1P12107 SNORA40.13-201ENST00000516379 120 ntBASIC-0.28□□□□□ -2.45
COL11A1P12107 RNU6-762P-201ENST00000517107 102 ntBASIC-0.28□□□□□ -2.45
COL11A1P12107 MIR3657-201ENST00000584818 117 ntBASIC-0.28□□□□□ -2.45
COL11A1P12107 snoR1.1-201ENST00000628177 80 ntBASIC-0.28□□□□□ -2.45
COL11A1P12107 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 MIR582-201ENST00000365731 98 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 SNORA19-201ENST00000384737 128 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 MIR204-201ENST00000385200 110 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 SNORD18.2-201ENST00000459604 70 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 MIR3179-1-201ENST00000578940 84 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 MIR3179-2-201ENST00000579107 84 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 MIR3179-3-201ENST00000579566 84 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 MIR4796-201ENST00000580742 81 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
COL11A1P12107 AL365222.1-201ENST00000614661 98 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 MIR3179-4-201ENST00000617599 84 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 MIR6738-201ENST00000619620 64 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 RNU5F-1-201ENST00000362507 117 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 SNORD115-37-201ENST00000363768 82 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 SNORD115-27-201ENST00000364430 82 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 RNY4P7-201ENST00000364600 96 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 SNORD74.6-201ENST00000364796 70 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 AP000533.3-201ENST00000447704 118 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 RNU6-158P-201ENST00000517104 100 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 SNORA40.17-201ENST00000517256 115 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 MIR5704-201ENST00000584029 77 ntBASIC-0.29□□□□□ -2.46
COL11A1P12107 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.29□□□□□ -2.46
COL11A1P12107 SNORD115-25-201ENST00000362619 82 ntBASIC-0.3□□□□□ -2.46
COL11A1P12107 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.3□□□□□ -2.46
COL11A1P12107 SNORD115-23-201ENST00000364461 82 ntBASIC-0.3□□□□□ -2.46
COL11A1P12107 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms