Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU6-824P-201ENST00000363724 104 ntBASIC-1.11□□□□□ -2.59
CD28P10747 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.11□□□□□ -2.59
CD28P10747 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.11□□□□□ -2.59
CD28P10747 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.11□□□□□ -2.59
CD28P10747 MIR548I1-201ENST00000408810 149 ntBASIC-1.11□□□□□ -2.59
CD28P10747 RNA5SP470-201ENST00000516463 106 ntBASIC-1.11□□□□□ -2.59
CD28P10747 MIR382-201ENST00000637119 76 ntBASIC-1.11□□□□□ -2.59
CD28P10747 AC099654.10-201ENST00000640395 161 ntBASIC-1.11□□□□□ -2.59
CD28P10747 SNORD58A-201ENST00000383875 65 ntBASIC-1.12□□□□□ -2.59
CD28P10747 RNY1P5-201ENST00000383890 115 ntBASIC-1.12□□□□□ -2.59
CD28P10747 RNU6-80P-201ENST00000384195 107 ntBASIC-1.12□□□□□ -2.59
CD28P10747 MIR124-2-201ENST00000385081 109 ntBASIC-1.12□□□□□ -2.59
CD28P10747 RNU6-972P-201ENST00000391208 107 ntBASIC-1.12□□□□□ -2.59
CD28P10747 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.12□□□□□ -2.59
CD28P10747 RNU6-795P-201ENST00000516323 103 ntBASIC-1.12□□□□□ -2.59
CD28P10747 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.12□□□□□ -2.59
CD28P10747 AL445584.3-201ENST00000617173 78 ntBASIC-1.12□□□□□ -2.59
CD28P10747 RNU5F-1-201ENST00000362507 117 ntBASIC-1.13□□□□□ -2.59
CD28P10747 uc_338.19-201ENST00000616808 99 ntBASIC-1.13□□□□□ -2.59
CD28P10747 MIR6888-201ENST00000621977 67 ntBASIC-1.13□□□□□ -2.59
CD28P10747 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.14□□□□□ -2.59
CD28P10747 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.14□□□□□ -2.59
CD28P10747 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.14□□□□□ -2.59
CD28P10747 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.14□□□□□ -2.59
CD28P10747 SCARNA18B-201ENST00000458806 135 ntBASIC-1.14□□□□□ -2.59
CD28P10747 RNU6-659P-201ENST00000516454 104 ntBASIC-1.14□□□□□ -2.59
CD28P10747 RNU6-971P-201ENST00000516920 106 ntBASIC-1.14□□□□□ -2.59
CD28P10747 MIR3657-201ENST00000584818 117 ntBASIC-1.14□□□□□ -2.59
CD28P10747 MIR4324-201ENST00000584846 72 ntBASIC-1.14□□□□□ -2.59
CD28P10747 U6.81-201ENST00000612550 106 ntBASIC-1.14□□□□□ -2.59
CD28P10747 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.15□□□□□ -2.59
CD28P10747 SNORD114-17-201ENST00000364699 75 ntBASIC-1.15□□□□□ -2.59
CD28P10747 SNORA33.1-201ENST00000364957 130 ntBASIC-1.15□□□□□ -2.59
CD28P10747 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.15□□□□□ -2.59
CD28P10747 MIR548A3-201ENST00000385297 97 ntBASIC-1.15□□□□□ -2.59
CD28P10747 RNU6-887P-201ENST00000410660 100 ntBASIC-1.15□□□□□ -2.59
CD28P10747 RNU6-904P-201ENST00000516206 101 ntBASIC-1.15□□□□□ -2.59
CD28P10747 MIR4499-201ENST00000584834 69 ntBASIC-1.15□□□□□ -2.59
CD28P10747 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.16□□□□□ -2.6
CD28P10747 SCARNA23-201ENST00000516060 130 ntBASIC-1.16□□□□□ -2.6
CD28P10747 AC140658.3-201ENST00000567603 271 ntBASIC-1.16□□□□□ -2.6
CD28P10747 MIR6509-201ENST00000614603 85 ntBASIC-1.16□□□□□ -2.6
CD28P10747 MIR4773-1-201ENST00000637203 78 ntBASIC-1.16□□□□□ -2.6
CD28P10747 MIR601-201ENST00000385256 79 ntBASIC-1.17□□□□□ -2.6
CD28P10747 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.17□□□□□ -2.6
CD28P10747 SNORD116-10-201ENST00000363791 102 ntBASIC-1.18□□□□□ -2.6
CD28P10747 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.18□□□□□ -2.6
CD28P10747 RNU6-880P-201ENST00000384526 107 ntBASIC-1.18□□□□□ -2.6
CD28P10747 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.18□□□□□ -2.6
CD28P10747 MIR1255B2-201ENST00000408618 67 ntBASIC-1.18□□□□□ -2.6
CD28P10747 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.19□□□□□ -2.6
CD28P10747 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.19□□□□□ -2.6
CD28P10747 RNU6-274P-201ENST00000459566 107 ntBASIC-1.19□□□□□ -2.6
CD28P10747 RNU6-412P-201ENST00000516434 106 ntBASIC-1.19□□□□□ -2.6
CD28P10747 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.19□□□□□ -2.6
CD28P10747 CYP3A54P-201ENST00000566950 75 ntBASIC-1.19□□□□□ -2.6
CD28P10747 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.19□□□□□ -2.6
CD28P10747 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.2□□□□□ -2.6
CD28P10747 MIR521-2-201ENST00000384818 87 ntBASIC-1.2□□□□□ -2.6
CD28P10747 RNU7-154P-201ENST00000516194 62 ntBASIC-1.2□□□□□ -2.6
CD28P10747 RNA5SP147-201ENST00000516493 109 ntBASIC-1.2□□□□□ -2.6
CD28P10747 RNU6-255P-201ENST00000516957 105 ntBASIC-1.2□□□□□ -2.6
CD28P10747 RNU6-537P-201ENST00000517277 103 ntBASIC-1.2□□□□□ -2.6
CD28P10747 AC026421.1-201ENST00000519101 163 ntBASIC-1.2□□□□□ -2.6
CD28P10747 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.2□□□□□ -2.6
CD28P10747 RNU6-924P-201ENST00000362926 108 ntBASIC-1.21□□□□□ -2.6
CD28P10747 MIR203A-201ENST00000384836 110 ntBASIC-1.21□□□□□ -2.6
CD28P10747 SNORA19.1-201ENST00000410656 129 ntBASIC-1.21□□□□□ -2.6
CD28P10747 AL691482.2-201ENST00000457453 84 ntBASIC-1.21□□□□□ -2.6
CD28P10747 RNU6-752P-201ENST00000516376 102 ntBASIC-1.21□□□□□ -2.6
CD28P10747 snoU83B.1-201ENST00000517136 88 ntBASIC-1.21□□□□□ -2.6
CD28P10747 MIR4796-201ENST00000580742 81 ntBASIC-1.21□□□□□ -2.6
CD28P10747 MIR6739-201ENST00000622461 75 ntBASIC-1.21□□□□□ -2.6
CD28P10747 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.22□□□□□ -2.6
CD28P10747 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.22□□□□□ -2.6
CD28P10747 RNU6-346P-201ENST00000516288 111 ntBASIC-1.22□□□□□ -2.6
CD28P10747 MIR378F-201ENST00000578143 78 ntBASIC-1.22□□□□□ -2.6
CD28P10747 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.22□□□□□ -2.6
CD28P10747 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.23□□□□□ -2.61
CD28P10747 MIR29B1-201ENST00000385015 81 ntBASIC-1.23□□□□□ -2.61
CD28P10747 SNORD115-33-201ENST00000363723 82 ntBASIC-1.24□□□□□ -2.61
CD28P10747 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.24□□□□□ -2.61
CD28P10747 SNORA26.4-201ENST00000391188 123 ntBASIC-1.24□□□□□ -2.61
CD28P10747 MIR1236-201ENST00000408340 102 ntBASIC-1.24□□□□□ -2.61
CD28P10747 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.24□□□□□ -2.61
CD28P10747 SNORD116-14-201ENST00000383894 92 ntBASIC-1.25□□□□□ -2.61
CD28P10747 SNORD116-17-201ENST00000383929 92 ntBASIC-1.25□□□□□ -2.61
CD28P10747 RNU6-24P-201ENST00000384440 107 ntBASIC-1.25□□□□□ -2.61
CD28P10747 SNORD116-15-201ENST00000384445 92 ntBASIC-1.25□□□□□ -2.61
CD28P10747 SNORD116-21-201ENST00000384507 92 ntBASIC-1.25□□□□□ -2.61
CD28P10747 SNORD116-19-201ENST00000384729 92 ntBASIC-1.25□□□□□ -2.61
CD28P10747 RNA5SP192-201ENST00000364404 120 ntBASIC-1.26□□□□□ -2.61
CD28P10747 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.26□□□□□ -2.61
CD28P10747 MIR3165-201ENST00000579874 75 ntBASIC-1.26□□□□□ -2.61
CD28P10747 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.27□□□□□ -2.61
CD28P10747 MIR519A2-201ENST00000384990 87 ntBASIC-1.28□□□□□ -2.61
CD28P10747 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.28□□□□□ -2.61
CD28P10747 MIR4723-201ENST00000585070 81 ntBASIC-1.28□□□□□ -2.61
CD28P10747 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
CD28P10747 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 844.2 ms