Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.94□□□□□ -2.56
VIMP08670 RNU6-704P-201ENST00000364162 103 ntBASIC-0.95□□□□□ -2.56
VIMP08670 SNORD58A-201ENST00000383875 65 ntBASIC-0.95□□□□□ -2.56
VIMP08670 SNORD90-201ENST00000391145 111 ntBASIC-0.95□□□□□ -2.56
VIMP08670 RNU6-337P-201ENST00000391243 106 ntBASIC-0.95□□□□□ -2.56
VIMP08670 RNU6-592P-201ENST00000411333 103 ntBASIC-0.95□□□□□ -2.56
VIMP08670 SNORD18.2-201ENST00000459604 70 ntBASIC-0.95□□□□□ -2.56
VIMP08670 SNORA18.5-201ENST00000516616 101 ntBASIC-0.95□□□□□ -2.56
VIMP08670 AC140658.3-201ENST00000567603 271 ntBASIC-0.95□□□□□ -2.56
VIMP08670 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.96□□□□□ -2.56
VIMP08670 MIRLET7B-201ENST00000385140 83 ntBASIC-0.96□□□□□ -2.56
VIMP08670 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.96□□□□□ -2.56
VIMP08670 SNORD75.2-201ENST00000408784 58 ntBASIC-0.96□□□□□ -2.56
VIMP08670 RNU6-887P-201ENST00000410660 100 ntBASIC-0.96□□□□□ -2.56
VIMP08670 SCARNA18B-201ENST00000458806 135 ntBASIC-0.96□□□□□ -2.56
VIMP08670 RNA5SP395-201ENST00000516567 118 ntBASIC-0.96□□□□□ -2.56
VIMP08670 RNY1P9-201ENST00000532431 109 ntBASIC-0.96□□□□□ -2.56
VIMP08670 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.96□□□□□ -2.56
VIMP08670 MIR6086-201ENST00000638065 55 ntBASIC-0.96□□□□□ -2.56
VIMP08670 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.97□□□□□ -2.56
VIMP08670 MTATP6P29-201ENST00000415057 132 ntBASIC-0.97□□□□□ -2.56
VIMP08670 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.97□□□□□ -2.56
VIMP08670 RNU7-24P-201ENST00000458867 62 ntBASIC-0.97□□□□□ -2.56
VIMP08670 AC021146.9-201ENST00000512503 156 ntBASIC-0.97□□□□□ -2.56
VIMP08670 RNU4-32P-201ENST00000363404 141 ntBASIC-0.98□□□□□ -2.57
VIMP08670 SNORA62.4-201ENST00000365504 151 ntBASIC-0.98□□□□□ -2.57
VIMP08670 SNORD57-201ENST00000448188 72 ntBASIC-0.98□□□□□ -2.57
VIMP08670 MIR3668-201ENST00000582138 75 ntBASIC-0.98□□□□□ -2.57
VIMP08670 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.99□□□□□ -2.57
VIMP08670 SNORD115-23-201ENST00000364461 82 ntBASIC-0.99□□□□□ -2.57
VIMP08670 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.99□□□□□ -2.57
VIMP08670 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.99□□□□□ -2.57
VIMP08670 MIR147A-201ENST00000385079 72 ntBASIC-1□□□□□ -2.57
VIMP08670 MIR124-2-201ENST00000385081 109 ntBASIC-1□□□□□ -2.57
VIMP08670 SNORD64-201ENST00000386683 67 ntBASIC-1□□□□□ -2.57
VIMP08670 AC090617.8-201ENST00000623339 167 ntBASIC-1□□□□□ -2.57
VIMP08670 U6.96-201ENST00000636425 70 ntBASIC-1□□□□□ -2.57
VIMP08670 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.01□□□□□ -2.57
VIMP08670 RNU6-431P-201ENST00000383874 107 ntBASIC-1.01□□□□□ -2.57
VIMP08670 RNU6-746P-201ENST00000384112 109 ntBASIC-1.01□□□□□ -2.57
VIMP08670 snoU83B.1-201ENST00000517136 88 ntBASIC-1.01□□□□□ -2.57
VIMP08670 RNU6-706P-201ENST00000517229 104 ntBASIC-1.01□□□□□ -2.57
VIMP08670 AC026421.1-201ENST00000519101 163 ntBASIC-1.01□□□□□ -2.57
VIMP08670 MIR4320-201ENST00000636981 65 ntBASIC-1.01□□□□□ -2.57
VIMP08670 MIR1302-5-201ENST00000408164 150 ntBASIC-1.02□□□□□ -2.57
VIMP08670 SNORD116-10-201ENST00000363791 102 ntBASIC-1.03□□□□□ -2.57
VIMP08670 RNU6-382P-201ENST00000365181 106 ntBASIC-1.03□□□□□ -2.57
VIMP08670 RNU6-959P-201ENST00000384671 107 ntBASIC-1.03□□□□□ -2.57
VIMP08670 MIR590-201ENST00000385008 97 ntBASIC-1.03□□□□□ -2.57
VIMP08670 RNA5SP147-201ENST00000516493 109 ntBASIC-1.03□□□□□ -2.57
VIMP08670 YWHAEP3-201ENST00000582767 121 ntBASIC-1.03□□□□□ -2.57
VIMP08670 AC006254.2-201ENST00000603259 279 ntBASIC-1.03□□□□□ -2.57
VIMP08670 MIR382-201ENST00000637119 76 ntBASIC-1.03□□□□□ -2.57
VIMP08670 RNU6-208P-201ENST00000362431 107 ntBASIC-1.04□□□□□ -2.58
VIMP08670 RNU5F-1-201ENST00000362507 117 ntBASIC-1.04□□□□□ -2.58
VIMP08670 SNORD114-17-201ENST00000364699 75 ntBASIC-1.04□□□□□ -2.58
VIMP08670 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
VIMP08670 MIR203A-201ENST00000384836 110 ntBASIC-1.05□□□□□ -2.58
VIMP08670 RNU7-61P-201ENST00000515897 61 ntBASIC-1.05□□□□□ -2.58
VIMP08670 RNU6-537P-201ENST00000517277 103 ntBASIC-1.05□□□□□ -2.58
VIMP08670 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.06□□□□□ -2.58
VIMP08670 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.06□□□□□ -2.58
VIMP08670 AC008267.6-201ENST00000441664 139 ntBASIC-1.06□□□□□ -2.58
VIMP08670 RNA5SP461-201ENST00000516451 104 ntBASIC-1.06□□□□□ -2.58
VIMP08670 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.06□□□□□ -2.58
VIMP08670 MIR4773-1-201ENST00000637203 78 ntBASIC-1.06□□□□□ -2.58
VIMP08670 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.07□□□□□ -2.58
VIMP08670 RNU6-824P-201ENST00000363724 104 ntBASIC-1.08□□□□□ -2.58
VIMP08670 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.08□□□□□ -2.58
VIMP08670 snoU13.17-201ENST00000458802 104 ntBASIC-1.08□□□□□ -2.58
VIMP08670 AL353803.5-201ENST00000599815 141 ntBASIC-1.08□□□□□ -2.58
VIMP08670 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.08□□□□□ -2.58
VIMP08670 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.09□□□□□ -2.58
VIMP08670 RNU6-260P-201ENST00000384092 107 ntBASIC-1.09□□□□□ -2.58
VIMP08670 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.09□□□□□ -2.58
VIMP08670 HLA-S-202ENST00000425174 53 ntBASIC-1.09□□□□□ -2.58
VIMP08670 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.09□□□□□ -2.58
VIMP08670 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.1□□□□□ -2.59
VIMP08670 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.1□□□□□ -2.59
VIMP08670 RNU6-554P-201ENST00000410466 106 ntBASIC-1.1□□□□□ -2.59
VIMP08670 MIR4796-201ENST00000580742 81 ntBASIC-1.1□□□□□ -2.59
VIMP08670 MIR4464-201ENST00000580818 92 ntBASIC-1.1□□□□□ -2.59
VIMP08670 AC138207.3-201ENST00000585289 166 ntBASIC-1.1□□□□□ -2.59
VIMP08670 AL365222.1-201ENST00000614661 98 ntBASIC-1.1□□□□□ -2.59
VIMP08670 MIR409-201ENST00000362237 79 ntBASIC-1.11□□□□□ -2.59
VIMP08670 SNORA33.1-201ENST00000364957 130 ntBASIC-1.11□□□□□ -2.59
VIMP08670 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.11□□□□□ -2.59
VIMP08670 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.11□□□□□ -2.59
VIMP08670 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.11□□□□□ -2.59
VIMP08670 RNU6-106P-201ENST00000384405 107 ntBASIC-1.11□□□□□ -2.59
VIMP08670 RNU6-162P-201ENST00000516228 103 ntBASIC-1.11□□□□□ -2.59
VIMP08670 RNU6-109P-201ENST00000516364 107 ntBASIC-1.11□□□□□ -2.59
VIMP08670 RNU6-184P-201ENST00000516514 107 ntBASIC-1.11□□□□□ -2.59
VIMP08670 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.12□□□□□ -2.59
VIMP08670 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.12□□□□□ -2.59
VIMP08670 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.12□□□□□ -2.59
VIMP08670 MIR6509-201ENST00000614603 85 ntBASIC-1.12□□□□□ -2.59
VIMP08670 MIR6129-201ENST00000616087 109 ntBASIC-1.12□□□□□ -2.59
VIMP08670 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.13□□□□□ -2.59
VIMP08670 RNU6-81P-201ENST00000365608 104 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 226.2 ms