Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC139453.2-201ENST00000487255 133 ntBASIC0.63□□□□□ -2.31
CHGBP05060 AC021146.9-201ENST00000512503 156 ntBASIC0.63□□□□□ -2.31
CHGBP05060 SNORA40.17-201ENST00000517256 115 ntBASIC0.63□□□□□ -2.31
CHGBP05060 MIR6755-201ENST00000619993 66 ntBASIC0.63□□□□□ -2.31
CHGBP05060 MIR6513-201ENST00000621188 64 ntBASIC0.63□□□□□ -2.31
CHGBP05060 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.63□□□□□ -2.31
CHGBP05060 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
CHGBP05060 SNORA2.1-201ENST00000363089 137 ntBASIC0.62□□□□□ -2.31
CHGBP05060 MIR582-201ENST00000365731 98 ntBASIC0.62□□□□□ -2.31
CHGBP05060 MIR7-2-201ENST00000384970 110 ntBASIC0.62□□□□□ -2.31
CHGBP05060 MIR516B1-201ENST00000385211 90 ntBASIC0.62□□□□□ -2.31
CHGBP05060 snoU13.18-201ENST00000459483 104 ntBASIC0.62□□□□□ -2.31
CHGBP05060 MIR936-201ENST00000401264 98 ntBASIC0.61□□□□□ -2.31
CHGBP05060 RNU6-1216P-201ENST00000362590 107 ntBASIC0.6□□□□□ -2.31
CHGBP05060 Y_RNA.125-201ENST00000363371 111 ntBASIC0.6□□□□□ -2.31
CHGBP05060 RNU6-645P-201ENST00000364649 106 ntBASIC0.6□□□□□ -2.31
CHGBP05060 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
CHGBP05060 MIR499B-201ENST00000636498 73 ntBASIC0.6□□□□□ -2.31
CHGBP05060 SNORA68.3-201ENST00000515906 83 ntBASIC0.59□□□□□ -2.31
CHGBP05060 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.59□□□□□ -2.32
CHGBP05060 MIR548C-201ENST00000384815 97 ntBASIC0.58□□□□□ -2.32
CHGBP05060 RNU6-630P-201ENST00000391258 106 ntBASIC0.58□□□□□ -2.32
CHGBP05060 MIR4711-201ENST00000578274 70 ntBASIC0.58□□□□□ -2.32
CHGBP05060 U7.6-201ENST00000610841 64 ntBASIC0.58□□□□□ -2.32
CHGBP05060 MIR103A1-201ENST00000362165 78 ntBASIC0.57□□□□□ -2.32
CHGBP05060 MIR501-201ENST00000390204 84 ntBASIC0.57□□□□□ -2.32
CHGBP05060 MIR548E-201ENST00000408287 88 ntBASIC0.57□□□□□ -2.32
CHGBP05060 MTND4LP1-201ENST00000446263 157 ntBASIC0.57□□□□□ -2.32
CHGBP05060 RNU6-539P-201ENST00000516665 103 ntBASIC0.57□□□□□ -2.32
CHGBP05060 RNU7-188P-201ENST00000517063 64 ntBASIC0.57□□□□□ -2.32
CHGBP05060 AL109933.3-201ENST00000619095 188 ntBASIC0.57□□□□□ -2.32
CHGBP05060 U6.111-201ENST00000636093 83 ntBASIC0.57□□□□□ -2.32
CHGBP05060 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
CHGBP05060 SNORD44.1-201ENST00000363202 61 ntBASIC0.56□□□□□ -2.32
CHGBP05060 RNU6-668P-201ENST00000364180 107 ntBASIC0.56□□□□□ -2.32
CHGBP05060 SNORA63.6-201ENST00000364921 119 ntBASIC0.56□□□□□ -2.32
CHGBP05060 SNORD116-24-201ENST00000384549 92 ntBASIC0.56□□□□□ -2.32
CHGBP05060 MIR4677-201ENST00000584153 80 ntBASIC0.56□□□□□ -2.32
CHGBP05060 AC084368.1-201ENST00000620935 65 ntBASIC0.56□□□□□ -2.32
CHGBP05060 RNU6-1162P-201ENST00000384443 104 ntBASIC0.55□□□□□ -2.32
CHGBP05060 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.55□□□□□ -2.32
CHGBP05060 RNA5SP128-201ENST00000365305 116 ntBASIC0.54□□□□□ -2.32
CHGBP05060 RNU6-800P-201ENST00000384473 103 ntBASIC0.54□□□□□ -2.32
CHGBP05060 MIR598-201ENST00000384868 97 ntBASIC0.54□□□□□ -2.32
CHGBP05060 RNU6-656P-201ENST00000516785 107 ntBASIC0.54□□□□□ -2.32
CHGBP05060 AC243829.3-201ENST00000622177 108 ntBASIC0.54□□□□□ -2.32
CHGBP05060 MIR20A-201ENST00000362279 71 ntBASIC0.53□□□□□ -2.32
CHGBP05060 SNORA33.1-201ENST00000364957 130 ntBASIC0.53□□□□□ -2.32
CHGBP05060 Y_RNA.443-201ENST00000384135 111 ntBASIC0.53□□□□□ -2.32
CHGBP05060 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.53□□□□□ -2.32
CHGBP05060 SNORD114-29-201ENST00000364819 70 ntBASIC0.52□□□□□ -2.33
CHGBP05060 MIR6739-201ENST00000622461 75 ntBASIC0.52□□□□□ -2.33
CHGBP05060 Y_RNA.540-201ENST00000384638 111 ntBASIC0.51□□□□□ -2.33
CHGBP05060 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
CHGBP05060 U6.96-201ENST00000636425 70 ntBASIC0.51□□□□□ -2.33
CHGBP05060 Y_RNA.250-201ENST00000364542 110 ntBASIC0.5□□□□□ -2.33
CHGBP05060 AC244090.1-201ENST00000441884 93 ntBASIC0.5□□□□□ -2.33
CHGBP05060 MIR548V-201ENST00000584165 80 ntBASIC0.5□□□□□ -2.33
CHGBP05060 MIR548AD-201ENST00000584780 82 ntBASIC0.5□□□□□ -2.33
CHGBP05060 AC005520.4-201ENST00000604337 90 ntBASIC0.5□□□□□ -2.33
CHGBP05060 MIRLET7D-201ENST00000362263 87 ntBASIC0.49□□□□□ -2.33
CHGBP05060 Y_RNA.340-201ENST00000365330 92 ntBASIC0.49□□□□□ -2.33
CHGBP05060 RNU6-815P-201ENST00000384080 113 ntBASIC0.49□□□□□ -2.33
CHGBP05060 MIR521-2-201ENST00000384818 87 ntBASIC0.49□□□□□ -2.33
CHGBP05060 RNA5SP62-201ENST00000363457 110 ntBASIC0.48□□□□□ -2.33
CHGBP05060 SNORA15B-2-201ENST00000384058 135 ntBASIC0.48□□□□□ -2.33
CHGBP05060 SNORA15B-1-201ENST00000384334 135 ntBASIC0.48□□□□□ -2.33
CHGBP05060 MIR643-201ENST00000385267 97 ntBASIC0.48□□□□□ -2.33
CHGBP05060 RNU6-788P-201ENST00000390967 104 ntBASIC0.48□□□□□ -2.33
CHGBP05060 MIR3925-201ENST00000584674 77 ntBASIC0.48□□□□□ -2.33
CHGBP05060 SNORA9.1-201ENST00000362412 131 ntBASIC0.47□□□□□ -2.33
CHGBP05060 SNORA25.4-201ENST00000363666 124 ntBASIC0.47□□□□□ -2.33
CHGBP05060 RNU6-590P-201ENST00000365039 107 ntBASIC0.47□□□□□ -2.33
CHGBP05060 RNU6-1036P-201ENST00000383959 104 ntBASIC0.47□□□□□ -2.33
CHGBP05060 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
CHGBP05060 Y_RNA.633-201ENST00000459107 95 ntBASIC0.47□□□□□ -2.33
CHGBP05060 AC125388.1-201ENST00000459631 156 ntBASIC0.47□□□□□ -2.33
CHGBP05060 SCARNA11.2-201ENST00000517183 154 ntBASIC0.47□□□□□ -2.33
CHGBP05060 AC243829.6-201ENST00000612652 106 ntBASIC0.47□□□□□ -2.33
CHGBP05060 RN7SL660P-201ENST00000614852 299 ntBASIC0.47□□□□□ -2.33
CHGBP05060 RNU6-848P-201ENST00000515948 107 ntBASIC0.46□□□□□ -2.34
CHGBP05060 RNU6-863P-201ENST00000515989 104 ntBASIC0.46□□□□□ -2.34
CHGBP05060 RNU6-617P-201ENST00000516147 107 ntBASIC0.46□□□□□ -2.34
CHGBP05060 RNU6-473P-201ENST00000516164 107 ntBASIC0.46□□□□□ -2.34
CHGBP05060 RNU6-1049P-201ENST00000516414 107 ntBASIC0.46□□□□□ -2.34
CHGBP05060 RNU6-1089P-201ENST00000516473 104 ntBASIC0.46□□□□□ -2.34
CHGBP05060 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
CHGBP05060 Y_RNA.386-201ENST00000383913 105 ntBASIC0.45□□□□□ -2.34
CHGBP05060 RNU6-127P-201ENST00000390897 107 ntBASIC0.45□□□□□ -2.34
CHGBP05060 RNU6-175P-201ENST00000516896 107 ntBASIC0.45□□□□□ -2.34
CHGBP05060 AC090617.8-201ENST00000623339 167 ntBASIC0.43□□□□□ -2.34
CHGBP05060 MIR106A-201ENST00000384870 81 ntBASIC0.41□□□□□ -2.34
CHGBP05060 SNORA49-201ENST00000386157 136 ntBASIC0.41□□□□□ -2.34
CHGBP05060 RNA5SP299-201ENST00000391203 116 ntBASIC0.41□□□□□ -2.34
CHGBP05060 AP000676.1-201ENST00000533307 52 ntBASIC0.41□□□□□ -2.34
CHGBP05060 CYP3A54P-201ENST00000566950 75 ntBASIC0.41□□□□□ -2.34
CHGBP05060 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CHGBP05060 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.41□□□□□ -2.34
CHGBP05060 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
CHGBP05060 MIR216A-201ENST00000385063 110 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms