Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SNORD115-31-201ENST00000365318 82 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 SNORD90-201ENST00000391145 111 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 RNY3P15-201ENST00000516297 97 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 RNU6-974P-201ENST00000384099 108 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 MIR1302-6-201ENST00000408466 90 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 MIR3149-201ENST00000584629 83 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 SNORD116-2-201ENST00000384274 95 ntBASIC-1.99□□□□□ -2.73
SPTA1P02549 MTND1P19-201ENST00000511780 315 ntBASIC-1.99□□□□□ -2.73
SPTA1P02549 AL160413.1-201ENST00000622780 310 ntBASIC-1.99□□□□□ -2.73
SPTA1P02549 DEFB108C-201ENST00000400154 252 ntBASIC-1.99□□□□□ -2.73
SPTA1P02549 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.99□□□□□ -2.73
SPTA1P02549 RNU6-381P-201ENST00000391259 108 ntBASIC-2□□□□□ -2.73
SPTA1P02549 MIR429-201ENST00000362106 83 ntBASIC-2□□□□□ -2.73
SPTA1P02549 Y_RNA.292-201ENST00000364904 97 ntBASIC-2□□□□□ -2.73
SPTA1P02549 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 RNU6-523P-201ENST00000516304 54 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 MIR3646-201ENST00000578301 84 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 AC013734.1-201ENST00000619329 111 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 MIR125B1-201ENST00000385236 88 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 SNORD113-2-201ENST00000391082 72 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 RNU6-995P-201ENST00000391244 107 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 RNU6-781P-201ENST00000516377 101 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 Z99129.1-201ENST00000612510 255 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 U6.81-201ENST00000612550 106 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 MIR6844-201ENST00000637122 62 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-2.02□□□□□ -2.73
SPTA1P02549 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 AC002553.4-201ENST00000616896 331 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 RPS29P30-201ENST00000600975 111 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 Y_RNA.89-201ENST00000363031 102 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 SNORD45B-201ENST00000364617 72 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 RNU6-1215P-201ENST00000384441 102 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 RNU6-460P-201ENST00000391158 108 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 AC104996.3-201ENST00000590718 94 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.03□□□□□ -2.74
SPTA1P02549 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.03□□□□□ -2.74
SPTA1P02549 SNORA41B-201ENST00000384785 128 ntBASIC-2.03□□□□□ -2.74
SPTA1P02549 RNY4P25-201ENST00000459254 96 ntBASIC-2.03□□□□□ -2.74
SPTA1P02549 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.03□□□□□ -2.74
SPTA1P02549 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.03□□□□□ -2.74
SPTA1P02549 RNU6-834P-201ENST00000362367 110 ntBASIC-2.04□□□□□ -2.74
SPTA1P02549 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.04□□□□□ -2.74
SPTA1P02549 MIR559-201ENST00000385188 96 ntBASIC-2.04□□□□□ -2.74
SPTA1P02549 RNU6-554P-201ENST00000410466 106 ntBASIC-2.04□□□□□ -2.74
SPTA1P02549 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.04□□□□□ -2.74
SPTA1P02549 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.04□□□□□ -2.74
SPTA1P02549 MIR4694-201ENST00000578534 80 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 SNORD115-37-201ENST00000363768 82 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 SNORD116-10-201ENST00000363791 102 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 RNU6-211P-201ENST00000384047 107 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 SNORA40.15-201ENST00000516884 107 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 MIR579-201ENST00000385221 98 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 SNORD77.2-201ENST00000391045 68 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 SNORD116.3-201ENST00000517176 78 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 AC130289.1-201ENST00000577321 73 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 MIR4777-201ENST00000583710 86 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 AL603755.1-201ENST00000619504 163 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 MTND4LP32-201ENST00000636111 270 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 RNY3P2-201ENST00000362918 102 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 RNU6-972P-201ENST00000391208 107 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 RNU6-669P-201ENST00000365575 107 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 Y_RNA.554-201ENST00000384672 102 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 MTND2P23-201ENST00000422990 651 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 MTND4LP1-201ENST00000446263 157 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 MTND5P22-201ENST00000458380 195 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 RNU7-61P-201ENST00000515897 61 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 MIR5693-201ENST00000577722 73 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 AC012531.4-201ENST00000616509 177 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 RNU6-598P-201ENST00000364017 105 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 RNU6-310P-201ENST00000384655 107 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 RNU7-121P-201ENST00000516604 62 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 MIR4796-201ENST00000580742 81 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 AC090971.5-201ENST00000621102 293 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 RNU6-624P-201ENST00000363411 107 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.08□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms