Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AL445584.3-201ENST00000617173 78 ntBASIC-1.22□□□□□ -2.6
TNFRSF11BO00300 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.23□□□□□ -2.61
TNFRSF11BO00300 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.23□□□□□ -2.61
TNFRSF11BO00300 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.23□□□□□ -2.61
TNFRSF11BO00300 RNU6-260P-201ENST00000384092 107 ntBASIC-1.23□□□□□ -2.61
TNFRSF11BO00300 SNORA40-201ENST00000388090 126 ntBASIC-1.23□□□□□ -2.61
TNFRSF11BO00300 RNU7-107P-201ENST00000459121 61 ntBASIC-1.23□□□□□ -2.61
TNFRSF11BO00300 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.23□□□□□ -2.61
TNFRSF11BO00300 RNU6-795P-201ENST00000516323 103 ntBASIC-1.23□□□□□ -2.61
TNFRSF11BO00300 MIR4777-201ENST00000583710 86 ntBASIC-1.23□□□□□ -2.61
TNFRSF11BO00300 MIR6888-201ENST00000621977 67 ntBASIC-1.23□□□□□ -2.61
TNFRSF11BO00300 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.24□□□□□ -2.61
TNFRSF11BO00300 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.24□□□□□ -2.61
TNFRSF11BO00300 MT-TG-201ENST00000387429 68 ntBASIC-1.24□□□□□ -2.61
TNFRSF11BO00300 snoU13.17-201ENST00000458802 104 ntBASIC-1.24□□□□□ -2.61
TNFRSF11BO00300 RNA5SP147-201ENST00000516493 109 ntBASIC-1.24□□□□□ -2.61
TNFRSF11BO00300 MIR203A-201ENST00000384836 110 ntBASIC-1.25□□□□□ -2.61
TNFRSF11BO00300 MIR548I1-201ENST00000408810 149 ntBASIC-1.25□□□□□ -2.61
TNFRSF11BO00300 MIR4773-1-201ENST00000637203 78 ntBASIC-1.25□□□□□ -2.61
TNFRSF11BO00300 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.26□□□□□ -2.61
TNFRSF11BO00300 RNU6-257P-201ENST00000410238 98 ntBASIC-1.26□□□□□ -2.61
TNFRSF11BO00300 RNU6-706P-201ENST00000517229 104 ntBASIC-1.26□□□□□ -2.61
TNFRSF11BO00300 AC012531.4-201ENST00000616509 177 ntBASIC-1.26□□□□□ -2.61
TNFRSF11BO00300 U4.2-201ENST00000618561 85 ntBASIC-1.26□□□□□ -2.61
TNFRSF11BO00300 SNORA33.1-201ENST00000364957 130 ntBASIC-1.27□□□□□ -2.61
TNFRSF11BO00300 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.27□□□□□ -2.61
TNFRSF11BO00300 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.27□□□□□ -2.61
TNFRSF11BO00300 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.27□□□□□ -2.61
TNFRSF11BO00300 RNU6-886P-201ENST00000384319 105 ntBASIC-1.27□□□□□ -2.61
TNFRSF11BO00300 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.27□□□□□ -2.61
TNFRSF11BO00300 MIR1285-2-201ENST00000408311 88 ntBASIC-1.27□□□□□ -2.61
TNFRSF11BO00300 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.27□□□□□ -2.61
TNFRSF11BO00300 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.27□□□□□ -2.61
TNFRSF11BO00300 MIR6509-201ENST00000614603 85 ntBASIC-1.27□□□□□ -2.61
TNFRSF11BO00300 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.27□□□□□ -2.61
TNFRSF11BO00300 MIR365A-201ENST00000362260 87 ntBASIC-1.28□□□□□ -2.61
TNFRSF11BO00300 RNU6-824P-201ENST00000363724 104 ntBASIC-1.28□□□□□ -2.61
TNFRSF11BO00300 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.28□□□□□ -2.61
TNFRSF11BO00300 RNU5F-1-201ENST00000362507 117 ntBASIC-1.29□□□□□ -2.62
TNFRSF11BO00300 SNORA2.1-201ENST00000363089 137 ntBASIC-1.29□□□□□ -2.62
TNFRSF11BO00300 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.29□□□□□ -2.62
TNFRSF11BO00300 MIR1255B2-201ENST00000408618 67 ntBASIC-1.29□□□□□ -2.62
TNFRSF11BO00300 SNORD33.1-201ENST00000516213 88 ntBASIC-1.29□□□□□ -2.62
TNFRSF11BO00300 MIR4441-201ENST00000582623 100 ntBASIC-1.29□□□□□ -2.62
TNFRSF11BO00300 MIR3914-2-201ENST00000637339 95 ntBASIC-1.29□□□□□ -2.62
TNFRSF11BO00300 MIR548A3-201ENST00000385297 97 ntBASIC-1.3□□□□□ -2.62
TNFRSF11BO00300 RNU7-200P-201ENST00000516105 62 ntBASIC-1.3□□□□□ -2.62
TNFRSF11BO00300 AC132825.6-201ENST00000638861 357 ntBASIC-1.3□□□□□ -2.62
TNFRSF11BO00300 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.31□□□□□ -2.62
TNFRSF11BO00300 SNORD58A-201ENST00000383875 65 ntBASIC-1.31□□□□□ -2.62
TNFRSF11BO00300 AL691482.2-201ENST00000457453 84 ntBASIC-1.31□□□□□ -2.62
TNFRSF11BO00300 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.31□□□□□ -2.62
TNFRSF11BO00300 RNU6-971P-201ENST00000516920 106 ntBASIC-1.31□□□□□ -2.62
TNFRSF11BO00300 CYP3A54P-201ENST00000566950 75 ntBASIC-1.31□□□□□ -2.62
TNFRSF11BO00300 MIR3657-201ENST00000584818 117 ntBASIC-1.31□□□□□ -2.62
TNFRSF11BO00300 RNU6-924P-201ENST00000362926 108 ntBASIC-1.32□□□□□ -2.62
TNFRSF11BO00300 RNU6-746P-201ENST00000384112 109 ntBASIC-1.32□□□□□ -2.62
TNFRSF11BO00300 MIR29B1-201ENST00000385015 81 ntBASIC-1.32□□□□□ -2.62
TNFRSF11BO00300 SNORA26.4-201ENST00000391188 123 ntBASIC-1.32□□□□□ -2.62
TNFRSF11BO00300 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.32□□□□□ -2.62
TNFRSF11BO00300 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.32□□□□□ -2.62
TNFRSF11BO00300 RNU6-972P-201ENST00000391208 107 ntBASIC-1.33□□□□□ -2.62
TNFRSF11BO00300 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.33□□□□□ -2.62
TNFRSF11BO00300 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.33□□□□□ -2.62
TNFRSF11BO00300 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.34□□□□□ -2.62
TNFRSF11BO00300 SNORD63.1-201ENST00000516178 80 ntBASIC-1.34□□□□□ -2.62
TNFRSF11BO00300 RNU7-154P-201ENST00000516194 62 ntBASIC-1.34□□□□□ -2.62
TNFRSF11BO00300 RNU6-479P-201ENST00000516348 105 ntBASIC-1.34□□□□□ -2.62
TNFRSF11BO00300 RNU6-158P-201ENST00000517104 100 ntBASIC-1.34□□□□□ -2.62
TNFRSF11BO00300 AC026421.1-201ENST00000519101 163 ntBASIC-1.34□□□□□ -2.62
TNFRSF11BO00300 MIR4723-201ENST00000585070 81 ntBASIC-1.34□□□□□ -2.62
TNFRSF11BO00300 U6.95-201ENST00000636931 70 ntBASIC-1.34□□□□□ -2.62
TNFRSF11BO00300 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.35□□□□□ -2.63
TNFRSF11BO00300 SNORD115-33-201ENST00000363723 82 ntBASIC-1.35□□□□□ -2.63
TNFRSF11BO00300 SNORD114-3-201ENST00000364969 75 ntBASIC-1.35□□□□□ -2.63
TNFRSF11BO00300 RNU6-887P-201ENST00000410660 100 ntBASIC-1.35□□□□□ -2.63
TNFRSF11BO00300 SCARNA23-201ENST00000516060 130 ntBASIC-1.35□□□□□ -2.63
TNFRSF11BO00300 AC138207.3-201ENST00000585289 166 ntBASIC-1.35□□□□□ -2.63
TNFRSF11BO00300 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.36□□□□□ -2.63
TNFRSF11BO00300 RNU6-80P-201ENST00000384195 107 ntBASIC-1.36□□□□□ -2.63
TNFRSF11BO00300 SNORA19.1-201ENST00000410656 129 ntBASIC-1.36□□□□□ -2.63
TNFRSF11BO00300 RNU7-134P-201ENST00000458997 64 ntBASIC-1.36□□□□□ -2.63
TNFRSF11BO00300 RNU6-346P-201ENST00000516288 111 ntBASIC-1.36□□□□□ -2.63
TNFRSF11BO00300 MIR6818-201ENST00000621576 65 ntBASIC-1.36□□□□□ -2.63
TNFRSF11BO00300 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.37□□□□□ -2.63
TNFRSF11BO00300 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.37□□□□□ -2.63
TNFRSF11BO00300 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.37□□□□□ -2.63
TNFRSF11BO00300 U6.81-201ENST00000612550 106 ntBASIC-1.37□□□□□ -2.63
TNFRSF11BO00300 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.37□□□□□ -2.63
TNFRSF11BO00300 RNU6-576P-201ENST00000390854 102 ntBASIC-1.38□□□□□ -2.63
TNFRSF11BO00300 HLA-S-202ENST00000425174 53 ntBASIC-1.38□□□□□ -2.63
TNFRSF11BO00300 MIR4796-201ENST00000580742 81 ntBASIC-1.38□□□□□ -2.63
TNFRSF11BO00300 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.38□□□□□ -2.63
TNFRSF11BO00300 MIR1246-201ENST00000636535 73 ntBASIC-1.38□□□□□ -2.63
TNFRSF11BO00300 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.39□□□□□ -2.63
TNFRSF11BO00300 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.39□□□□□ -2.63
TNFRSF11BO00300 RNU4-61P-201ENST00000411243 107 ntBASIC-1.39□□□□□ -2.63
TNFRSF11BO00300 RNU6-904P-201ENST00000516206 101 ntBASIC-1.39□□□□□ -2.63
TNFRSF11BO00300 RNU6-659P-201ENST00000516454 104 ntBASIC-1.39□□□□□ -2.63
TNFRSF11BO00300 AC099654.10-201ENST00000640395 161 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms