Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 SNORA41B-201ENST00000384785 128 ntBASIC0.97□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 MIR520E-201ENST00000384867 87 ntBASIC0.97□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 MIR548E-201ENST00000408287 88 ntBASIC0.97□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 RNU4-88P-201ENST00000411220 86 ntBASIC0.97□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 MIR4752-201ENST00000579672 72 ntBASIC0.97□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 U6.96-201ENST00000636425 70 ntBASIC0.97□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 MIR6767-201ENST00000637302 66 ntBASIC0.97□□□□□ -2.25
C1QTNF3-AMACRE9PGA6 SNORA36.1-201ENST00000363424 132 ntBASIC0.96□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 SNORD99-201ENST00000408612 74 ntBASIC0.96□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 RNA5SP268-201ENST00000516828 124 ntBASIC0.96□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 MIR18A-201ENST00000362310 71 ntBASIC0.95□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 RNA5SP220-201ENST00000516298 104 ntBASIC0.95□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 CYP3A54P-201ENST00000566950 75 ntBASIC0.95□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.95□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 SNORA70.25-201ENST00000612741 95 ntBASIC0.95□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 RNU1-124P-201ENST00000363861 145 ntBASIC0.94□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 RPS29P1-201ENST00000465274 159 ntBASIC0.94□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 MIR7107-201ENST00000611489 80 ntBASIC0.94□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 AC090617.8-201ENST00000623339 167 ntBASIC0.94□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 MIR6828-201ENST00000636181 60 ntBASIC0.94□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 RNU6-753P-201ENST00000363926 107 ntBASIC0.93□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 RNU6-520P-201ENST00000384717 104 ntBASIC0.93□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 SNORD116.2-201ENST00000391251 93 ntBASIC0.93□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 RNA5SP222-201ENST00000411039 105 ntBASIC0.93□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 RNU6-518P-201ENST00000516056 96 ntBASIC0.93□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.93□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 AC025627.3-201ENST00000582078 182 ntBASIC0.93□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 MIR6734-201ENST00000621166 68 ntBASIC0.93□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 Y_RNA.379-201ENST00000365653 102 ntBASIC0.92□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 MIR19B1-201ENST00000384829 87 ntBASIC0.92□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 MIR200A-201ENST00000384875 90 ntBASIC0.92□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 MIR516B1-201ENST00000385211 90 ntBASIC0.92□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 RNU6-42P-201ENST00000384165 107 ntBASIC0.91□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.91□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 RNA5SP94-201ENST00000516917 108 ntBASIC0.91□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 RNU6-231P-201ENST00000517122 103 ntBASIC0.91□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 MIR151B-201ENST00000584249 96 ntBASIC0.91□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 MIR6788-201ENST00000618842 66 ntBASIC0.91□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
C1QTNF3-AMACRE9PGA6 MIR527-201ENST00000385244 85 ntBASIC0.9□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 MIR1255B2-201ENST00000408618 67 ntBASIC0.9□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 RNU7-119P-201ENST00000459279 63 ntBASIC0.9□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 RNA5SP255-201ENST00000516370 107 ntBASIC0.9□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 AC243829.6-201ENST00000612652 106 ntBASIC0.9□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 SNORD114-24-201ENST00000365029 72 ntBASIC0.89□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 RNY1P8-201ENST00000383970 114 ntBASIC0.89□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.89□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 RNA5SP480-201ENST00000516840 109 ntBASIC0.89□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.89□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 MIR373-201ENST00000362273 69 ntBASIC0.88□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 RNA5SP325-201ENST00000363756 130 ntBASIC0.88□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 HMGN2P22-201ENST00000427588 175 ntBASIC0.88□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 AL021921.1-201ENST00000442774 93 ntBASIC0.88□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 SNORA36.2-201ENST00000384004 127 ntBASIC0.87□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 MIR519A2-201ENST00000384990 87 ntBASIC0.87□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.87□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 MIR548J-201ENST00000408833 112 ntBASIC0.87□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 RNU6-1223P-201ENST00000517124 104 ntBASIC0.87□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.87□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 AC069271.1-201ENST00000445577 156 ntBASIC0.86□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 Y_RNA.74-201ENST00000362911 99 ntBASIC0.85□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 SNORD116-16-201ENST00000384533 92 ntBASIC0.85□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.85□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 MIR548AG1-201ENST00000579932 66 ntBASIC0.85□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 Y_RNA.282-201ENST00000364793 102 ntBASIC0.84□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 CYP3A137P-201ENST00000562436 69 ntBASIC0.84□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 SNORA25.18-201ENST00000607153 114 ntBASIC0.84□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 MIR7110-201ENST00000612638 86 ntBASIC0.84□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 MIR6779-201ENST00000617283 64 ntBASIC0.84□□□□□ -2.27
C1QTNF3-AMACRE9PGA6 MIR20A-201ENST00000362279 71 ntBASIC0.83□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNU6-810P-201ENST00000364001 107 ntBASIC0.83□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 SNORA40.16-201ENST00000517238 121 ntBASIC0.83□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 AC243829.3-201ENST00000622177 108 ntBASIC0.83□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNA5SP517-201ENST00000364724 117 ntBASIC0.82□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 AC244090.1-201ENST00000441884 93 ntBASIC0.82□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNU6-980P-201ENST00000516925 103 ntBASIC0.82□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNU1-29P-201ENST00000606574 126 ntBASIC0.82□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNU4-45P-201ENST00000365469 141 ntBASIC0.81□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 Y_RNA.423-201ENST00000384057 113 ntBASIC0.81□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNU6-35P-201ENST00000384530 107 ntBASIC0.81□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNU6-172P-201ENST00000411000 93 ntBASIC0.81□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNU7-188P-201ENST00000517063 64 ntBASIC0.81□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 Y_RNA.109-201ENST00000363215 102 ntBASIC0.8□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNU4-33P-201ENST00000364316 85 ntBASIC0.8□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNU6-337P-201ENST00000391243 106 ntBASIC0.8□□□□□ -2.28
C1QTNF3-AMACRE9PGA6 RNU6-1232P-201ENST00000516299 86 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms