Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 RNU6-42P-201ENST00000384165 107 ntBASIC1.3□□□□□ -2.2
SPDYE3A6NKU9 RNU6-520P-201ENST00000384717 104 ntBASIC1.3□□□□□ -2.2
SPDYE3A6NKU9 MIR516B1-201ENST00000385211 90 ntBASIC1.3□□□□□ -2.2
SPDYE3A6NKU9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.3□□□□□ -2.2
SPDYE3A6NKU9 RNU6-518P-201ENST00000516056 96 ntBASIC1.3□□□□□ -2.2
SPDYE3A6NKU9 RNA5SP220-201ENST00000516298 104 ntBASIC1.3□□□□□ -2.2
SPDYE3A6NKU9 RNA5SP268-201ENST00000516828 124 ntBASIC1.3□□□□□ -2.2
SPDYE3A6NKU9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
SPDYE3A6NKU9 Y_RNA.224-201ENST00000364308 111 ntBASIC1.29□□□□□ -2.2
SPDYE3A6NKU9 SNORD99-201ENST00000408612 74 ntBASIC1.29□□□□□ -2.2
SPDYE3A6NKU9 RNU6-980P-201ENST00000516925 103 ntBASIC1.29□□□□□ -2.2
SPDYE3A6NKU9 RNY1P8-201ENST00000383970 114 ntBASIC1.28□□□□□ -2.2
SPDYE3A6NKU9 RNU6-35P-201ENST00000384530 107 ntBASIC1.28□□□□□ -2.2
SPDYE3A6NKU9 MIR4295-201ENST00000585286 85 ntBASIC1.28□□□□□ -2.2
SPDYE3A6NKU9 SNORD114-24-201ENST00000365029 72 ntBASIC1.27□□□□□ -2.21
SPDYE3A6NKU9 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
SPDYE3A6NKU9 SNORA40.16-201ENST00000517238 121 ntBASIC1.27□□□□□ -2.21
SPDYE3A6NKU9 MIR618-201ENST00000385287 98 ntBASIC1.26□□□□□ -2.21
SPDYE3A6NKU9 MIR1255B2-201ENST00000408618 67 ntBASIC1.26□□□□□ -2.21
SPDYE3A6NKU9 HMGN2P22-201ENST00000427588 175 ntBASIC1.26□□□□□ -2.21
SPDYE3A6NKU9 RNA5SP94-201ENST00000516917 108 ntBASIC1.26□□□□□ -2.21
SPDYE3A6NKU9 MIR519A2-201ENST00000384990 87 ntBASIC1.25□□□□□ -2.21
SPDYE3A6NKU9 RNA5SP255-201ENST00000516370 107 ntBASIC1.25□□□□□ -2.21
SPDYE3A6NKU9 MIR1285-1-201ENST00000408593 84 ntBASIC1.24□□□□□ -2.21
SPDYE3A6NKU9 AC025627.3-201ENST00000582078 182 ntBASIC1.24□□□□□ -2.21
SPDYE3A6NKU9 RNU1-29P-201ENST00000606574 126 ntBASIC1.24□□□□□ -2.21
SPDYE3A6NKU9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.24□□□□□ -2.21
SPDYE3A6NKU9 Y_RNA.282-201ENST00000364793 102 ntBASIC1.23□□□□□ -2.21
SPDYE3A6NKU9 MIR1276-201ENST00000408707 83 ntBASIC1.23□□□□□ -2.21
SPDYE3A6NKU9 SNORD116-16-201ENST00000384533 92 ntBASIC1.22□□□□□ -2.21
SPDYE3A6NKU9 MIR527-201ENST00000385244 85 ntBASIC1.22□□□□□ -2.21
SPDYE3A6NKU9 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
SPDYE3A6NKU9 RNA5SP222-201ENST00000411039 105 ntBASIC1.22□□□□□ -2.21
SPDYE3A6NKU9 RNU7-119P-201ENST00000459279 63 ntBASIC1.22□□□□□ -2.21
SPDYE3A6NKU9 RNA5SP102-201ENST00000516865 106 ntBASIC1.22□□□□□ -2.21
SPDYE3A6NKU9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.22□□□□□ -2.21
SPDYE3A6NKU9 AC243829.6-201ENST00000612652 106 ntBASIC1.22□□□□□ -2.21
SPDYE3A6NKU9 MIR4452-201ENST00000583004 71 ntBASIC1.21□□□□□ -2.22
SPDYE3A6NKU9 Y_RNA.74-201ENST00000362911 99 ntBASIC1.2□□□□□ -2.22
SPDYE3A6NKU9 RNU6-810P-201ENST00000364001 107 ntBASIC1.2□□□□□ -2.22
SPDYE3A6NKU9 RNU6-337P-201ENST00000391243 106 ntBASIC1.2□□□□□ -2.22
SPDYE3A6NKU9 AL021921.1-201ENST00000442774 93 ntBASIC1.2□□□□□ -2.22
SPDYE3A6NKU9 AC069271.1-201ENST00000445577 156 ntBASIC1.2□□□□□ -2.22
SPDYE3A6NKU9 AC243829.3-201ENST00000622177 108 ntBASIC1.2□□□□□ -2.22
SPDYE3A6NKU9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.2□□□□□ -2.22
SPDYE3A6NKU9 SNORD114-21-201ENST00000606412 72 ntBASIC1.19□□□□□ -2.22
SPDYE3A6NKU9 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.19□□□□□ -2.22
SPDYE3A6NKU9 RNU4-33P-201ENST00000364316 85 ntBASIC1.18□□□□□ -2.22
SPDYE3A6NKU9 SNORA49-201ENST00000386157 136 ntBASIC1.18□□□□□ -2.22
SPDYE3A6NKU9 RNU6-1232P-201ENST00000516299 86 ntBASIC1.18□□□□□ -2.22
SPDYE3A6NKU9 MIR7110-201ENST00000612638 86 ntBASIC1.18□□□□□ -2.22
SPDYE3A6NKU9 MIR6734-201ENST00000621166 68 ntBASIC1.18□□□□□ -2.22
SPDYE3A6NKU9 SNORD1B-201ENST00000363091 84 ntBASIC1.17□□□□□ -2.22
SPDYE3A6NKU9 Y_RNA.109-201ENST00000363215 102 ntBASIC1.17□□□□□ -2.22
SPDYE3A6NKU9 SNORD114-27-201ENST00000363766 70 ntBASIC1.17□□□□□ -2.22
SPDYE3A6NKU9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SPDYE3A6NKU9 RNU6-172P-201ENST00000411000 93 ntBASIC1.16□□□□□ -2.22
SPDYE3A6NKU9 SNORA25.18-201ENST00000607153 114 ntBASIC1.16□□□□□ -2.22
SPDYE3A6NKU9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
SPDYE3A6NKU9 RNU4-38P-201ENST00000364472 129 ntBASIC1.15□□□□□ -2.23
SPDYE3A6NKU9 RNA5SP517-201ENST00000364724 117 ntBASIC1.15□□□□□ -2.23
SPDYE3A6NKU9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.15□□□□□ -2.23
SPDYE3A6NKU9 ACA64.5-201ENST00000516207 127 ntBASIC1.15□□□□□ -2.23
SPDYE3A6NKU9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SPDYE3A6NKU9 MIR96-201ENST00000362288 78 ntBASIC1.14□□□□□ -2.23
SPDYE3A6NKU9 RNU6-930P-201ENST00000390938 100 ntBASIC1.14□□□□□ -2.23
SPDYE3A6NKU9 SNORA36.2-201ENST00000384004 127 ntBASIC1.13□□□□□ -2.23
SPDYE3A6NKU9 MIR489-201ENST00000384923 84 ntBASIC1.13□□□□□ -2.23
SPDYE3A6NKU9 SNORA40B-201ENST00000385573 128 ntBASIC1.13□□□□□ -2.23
SPDYE3A6NKU9 RNU7-188P-201ENST00000517063 64 ntBASIC1.13□□□□□ -2.23
SPDYE3A6NKU9 MIR6773-201ENST00000612812 74 ntBASIC1.13□□□□□ -2.23
SPDYE3A6NKU9 MIR20A-201ENST00000362279 71 ntBASIC1.12□□□□□ -2.23
SPDYE3A6NKU9 AC244090.1-201ENST00000441884 93 ntBASIC1.12□□□□□ -2.23
SPDYE3A6NKU9 MIR4490-201ENST00000582647 84 ntBASIC1.12□□□□□ -2.23
SPDYE3A6NKU9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.12□□□□□ -2.23
SPDYE3A6NKU9 SNORD115-25-201ENST00000362619 82 ntBASIC1.11□□□□□ -2.23
SPDYE3A6NKU9 MIR579-201ENST00000385221 98 ntBASIC1.11□□□□□ -2.23
SPDYE3A6NKU9 MIR548X-201ENST00000580069 75 ntBASIC1.11□□□□□ -2.23
SPDYE3A6NKU9 RNU6-246P-201ENST00000384702 107 ntBASIC1.1□□□□□ -2.23
SPDYE3A6NKU9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.1□□□□□ -2.23
SPDYE3A6NKU9 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
SPDYE3A6NKU9 RNU6-175P-201ENST00000516896 107 ntBASIC1.1□□□□□ -2.23
SPDYE3A6NKU9 MIR4661-201ENST00000582720 75 ntBASIC1.1□□□□□ -2.23
SPDYE3A6NKU9 AL353765.1-201ENST00000605514 183 ntBASIC1.1□□□□□ -2.23
SPDYE3A6NKU9 RNU1-93P-201ENST00000364704 169 ntBASIC1.09□□□□□ -2.23
SPDYE3A6NKU9 SNORD114-22-201ENST00000365423 72 ntBASIC1.09□□□□□ -2.23
SPDYE3A6NKU9 MIR548F3-201ENST00000408509 87 ntBASIC1.09□□□□□ -2.23
SPDYE3A6NKU9 RNU4-54P-201ENST00000516428 129 ntBASIC1.09□□□□□ -2.23
SPDYE3A6NKU9 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
SPDYE3A6NKU9 MIR6767-201ENST00000637302 66 ntBASIC1.09□□□□□ -2.23
SPDYE3A6NKU9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
SPDYE3A6NKU9 Y_RNA.423-201ENST00000384057 113 ntBASIC1.08□□□□□ -2.24
SPDYE3A6NKU9 RNU6-458P-201ENST00000384179 107 ntBASIC1.07□□□□□ -2.24
SPDYE3A6NKU9 MIR532-201ENST00000385025 91 ntBASIC1.07□□□□□ -2.24
SPDYE3A6NKU9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.07□□□□□ -2.24
SPDYE3A6NKU9 RNU6-1223P-201ENST00000517124 104 ntBASIC1.07□□□□□ -2.24
SPDYE3A6NKU9 U6.58-201ENST00000613107 107 ntBASIC1.07□□□□□ -2.24
SPDYE3A6NKU9 U2.18-201ENST00000622185 84 ntBASIC1.07□□□□□ -2.24
SPDYE3A6NKU9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
SPDYE3A6NKU9 RNU6-1036P-201ENST00000383959 104 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms