Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
SAA2-SAA4A0A096LPE2 AC244090.1-201ENST00000441884 93 ntBASIC0.13□□□□□ -2.39
SAA2-SAA4A0A096LPE2 AL691482.2-201ENST00000457453 84 ntBASIC0.13□□□□□ -2.39
SAA2-SAA4A0A096LPE2 MIR3202-2-201ENST00000635980 79 ntBASIC0.13□□□□□ -2.39
SAA2-SAA4A0A096LPE2 Y_RNA.36-201ENST00000362602 112 ntBASIC0.12□□□□□ -2.39
SAA2-SAA4A0A096LPE2 RNU6-681P-201ENST00000364012 104 ntBASIC0.12□□□□□ -2.39
SAA2-SAA4A0A096LPE2 RNU6-260P-201ENST00000384092 107 ntBASIC0.12□□□□□ -2.39
SAA2-SAA4A0A096LPE2 MIR593-201ENST00000384856 100 ntBASIC0.12□□□□□ -2.39
SAA2-SAA4A0A096LPE2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
SAA2-SAA4A0A096LPE2 SNORD78.1-201ENST00000390866 65 ntBASIC0.12□□□□□ -2.39
SAA2-SAA4A0A096LPE2 SCARNA18B-201ENST00000458806 135 ntBASIC0.12□□□□□ -2.39
SAA2-SAA4A0A096LPE2 RNA5SP395-201ENST00000516567 118 ntBASIC0.12□□□□□ -2.39
SAA2-SAA4A0A096LPE2 MIR4484-201ENST00000582855 83 ntBASIC0.12□□□□□ -2.39
SAA2-SAA4A0A096LPE2 MIR3657-201ENST00000584818 117 ntBASIC0.12□□□□□ -2.39
SAA2-SAA4A0A096LPE2 RNA5SP163-201ENST00000410304 99 ntBASIC0.11□□□□□ -2.39
SAA2-SAA4A0A096LPE2 RNU6-752P-201ENST00000516376 102 ntBASIC0.11□□□□□ -2.39
SAA2-SAA4A0A096LPE2 RNU6-180P-201ENST00000516697 61 ntBASIC0.11□□□□□ -2.39
SAA2-SAA4A0A096LPE2 AC145423.2-201ENST00000610631 239 ntBASIC0.11□□□□□ -2.39
SAA2-SAA4A0A096LPE2 Y_RNA.788-201ENST00000622394 112 ntBASIC0.11□□□□□ -2.39
SAA2-SAA4A0A096LPE2 RNU6-1036P-201ENST00000383959 104 ntBASIC0.1□□□□□ -2.39
SAA2-SAA4A0A096LPE2 MIR145-201ENST00000384967 88 ntBASIC0.1□□□□□ -2.39
SAA2-SAA4A0A096LPE2 snoU13.13-201ENST00000458842 104 ntBASIC0.1□□□□□ -2.39
SAA2-SAA4A0A096LPE2 SNORA72.7-201ENST00000516349 94 ntBASIC0.1□□□□□ -2.39
SAA2-SAA4A0A096LPE2 MIR924-201ENST00000638017 53 ntBASIC0.1□□□□□ -2.39
SAA2-SAA4A0A096LPE2 SNORD114-5-201ENST00000362928 70 ntBASIC0.09□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR106A-201ENST00000384870 81 ntBASIC0.09□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR610-201ENST00000385139 96 ntBASIC0.09□□□□□ -2.4
SAA2-SAA4A0A096LPE2 RNA5SP147-201ENST00000516493 109 ntBASIC0.09□□□□□ -2.4
SAA2-SAA4A0A096LPE2 RNU6-1094P-201ENST00000362416 104 ntBASIC0.08□□□□□ -2.4
SAA2-SAA4A0A096LPE2 SNORA2.1-201ENST00000363089 137 ntBASIC0.08□□□□□ -2.4
SAA2-SAA4A0A096LPE2 SNORA8.1-201ENST00000384250 140 ntBASIC0.08□□□□□ -2.4
SAA2-SAA4A0A096LPE2 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
SAA2-SAA4A0A096LPE2 RNA5SP225-201ENST00000410874 135 ntBASIC0.08□□□□□ -2.4
SAA2-SAA4A0A096LPE2 Y_RNA.633-201ENST00000459107 95 ntBASIC0.08□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR4514-201ENST00000581410 57 ntBASIC0.08□□□□□ -2.4
SAA2-SAA4A0A096LPE2 RN7SL793P-201ENST00000583259 296 ntBASIC0.08□□□□□ -2.4
SAA2-SAA4A0A096LPE2 PVT1_3.1-201ENST00000620853 95 ntBASIC0.08□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR6514-201ENST00000622549 70 ntBASIC0.08□□□□□ -2.4
SAA2-SAA4A0A096LPE2 AC010487.4-201ENST00000637027 61 ntBASIC0.08□□□□□ -2.4
SAA2-SAA4A0A096LPE2 SNORA63.6-201ENST00000364921 119 ntBASIC0.07□□□□□ -2.4
SAA2-SAA4A0A096LPE2 RNU6-279P-201ENST00000391297 101 ntBASIC0.07□□□□□ -2.4
SAA2-SAA4A0A096LPE2 RNU7-165P-201ENST00000458864 60 ntBASIC0.07□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR3675-201ENST00000583661 73 ntBASIC0.07□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR4743-201ENST00000584576 69 ntBASIC0.07□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR664A-201ENST00000626086 82 ntBASIC0.07□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR1297-201ENST00000637311 77 ntBASIC0.07□□□□□ -2.4
SAA2-SAA4A0A096LPE2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.06□□□□□ -2.4
SAA2-SAA4A0A096LPE2 AC021146.9-201ENST00000512503 156 ntBASIC0.06□□□□□ -2.4
SAA2-SAA4A0A096LPE2 RNU6-857P-201ENST00000515893 110 ntBASIC0.06□□□□□ -2.4
SAA2-SAA4A0A096LPE2 RNU6-807P-201ENST00000516805 107 ntBASIC0.06□□□□□ -2.4
SAA2-SAA4A0A096LPE2 CR383656.4-201ENST00000546909 122 ntBASIC0.06□□□□□ -2.4
SAA2-SAA4A0A096LPE2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.06□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR7-2-201ENST00000384970 110 ntBASIC0.05□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR892B-201ENST00000401279 77 ntBASIC0.05□□□□□ -2.4
SAA2-SAA4A0A096LPE2 SNORA62.5-201ENST00000516634 120 ntBASIC0.05□□□□□ -2.4
SAA2-SAA4A0A096LPE2 RNU6-1275P-201ENST00000391087 107 ntBASIC0.04□□□□□ -2.4
SAA2-SAA4A0A096LPE2 RNU6-380P-201ENST00000410207 107 ntBASIC0.04□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR4290-201ENST00000583807 95 ntBASIC0.04□□□□□ -2.4
SAA2-SAA4A0A096LPE2 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.03□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR193B-201ENST00000384907 83 ntBASIC0.03□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR3134-201ENST00000579433 74 ntBASIC0.03□□□□□ -2.4
SAA2-SAA4A0A096LPE2 MIR6507-201ENST00000613630 70 ntBASIC0.03□□□□□ -2.4
SAA2-SAA4A0A096LPE2 RNU6-929P-201ENST00000384429 107 ntBASIC0.02□□□□□ -2.41
SAA2-SAA4A0A096LPE2 MIR489-201ENST00000384923 84 ntBASIC0.02□□□□□ -2.41
SAA2-SAA4A0A096LPE2 RNU6-337P-201ENST00000391243 106 ntBASIC0.02□□□□□ -2.41
SAA2-SAA4A0A096LPE2 RNU7-159P-201ENST00000459284 62 ntBASIC0.02□□□□□ -2.41
SAA2-SAA4A0A096LPE2 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.02□□□□□ -2.41
SAA2-SAA4A0A096LPE2 MIR6739-201ENST00000622461 75 ntBASIC0.02□□□□□ -2.41
SAA2-SAA4A0A096LPE2 AC090617.8-201ENST00000623339 167 ntBASIC0.02□□□□□ -2.41
SAA2-SAA4A0A096LPE2 MIR148A-201ENST00000362215 68 ntBASIC0.01□□□□□ -2.41
SAA2-SAA4A0A096LPE2 RNA5SP98-201ENST00000363158 137 ntBASIC0.01□□□□□ -2.41
SAA2-SAA4A0A096LPE2 SNORA33.1-201ENST00000364957 130 ntBASIC0.01□□□□□ -2.41
SAA2-SAA4A0A096LPE2 AC023932.2-201ENST00000603176 175 ntBASIC0.01□□□□□ -2.41
SAA2-SAA4A0A096LPE2 RNU6-502P-201ENST00000362419 108 ntBASIC0□□□□□ -2.41
SAA2-SAA4A0A096LPE2 Y_RNA.250-201ENST00000364542 110 ntBASIC0□□□□□ -2.41
SAA2-SAA4A0A096LPE2 RNU6-24P-201ENST00000384440 107 ntBASIC0□□□□□ -2.41
SAA2-SAA4A0A096LPE2 RNU6-604P-201ENST00000390917 100 ntBASIC0□□□□□ -2.41
SAA2-SAA4A0A096LPE2 Y_RNA.685-201ENST00000516532 108 ntBASIC0□□□□□ -2.41
SAA2-SAA4A0A096LPE2 MIR6718-201ENST00000616153 80 ntBASIC0□□□□□ -2.41
SAA2-SAA4A0A096LPE2 MIR655-201ENST00000362159 97 ntBASIC-0.01□□□□□ -2.41
SAA2-SAA4A0A096LPE2 SNORD115-25-201ENST00000362619 82 ntBASIC-0.01□□□□□ -2.41
SAA2-SAA4A0A096LPE2 SNORD45.1-201ENST00000363181 77 ntBASIC-0.01□□□□□ -2.41
SAA2-SAA4A0A096LPE2 SNORD115-22-201ENST00000364456 82 ntBASIC-0.01□□□□□ -2.41
SAA2-SAA4A0A096LPE2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
SAA2-SAA4A0A096LPE2 SNORD2-201ENST00000459163 69 ntBASIC-0.01□□□□□ -2.41
SAA2-SAA4A0A096LPE2 AP000676.1-201ENST00000533307 52 ntBASIC-0.01□□□□□ -2.41
SAA2-SAA4A0A096LPE2 MIR6773-201ENST00000612812 74 ntBASIC-0.01□□□□□ -2.41
SAA2-SAA4A0A096LPE2 MIR521-2-201ENST00000384818 87 ntBASIC-0.02□□□□□ -2.41
SAA2-SAA4A0A096LPE2 AC244250.2-201ENST00000418731 148 ntBASIC-0.02□□□□□ -2.41
SAA2-SAA4A0A096LPE2 RNU6-656P-201ENST00000516785 107 ntBASIC-0.02□□□□□ -2.41
SAA2-SAA4A0A096LPE2 MIR1273G-201ENST00000577677 100 ntBASIC-0.02□□□□□ -2.41
SAA2-SAA4A0A096LPE2 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
SAA2-SAA4A0A096LPE2 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
SAA2-SAA4A0A096LPE2 SNORD114-26-201ENST00000363543 72 ntBASIC-0.03□□□□□ -2.41
SAA2-SAA4A0A096LPE2 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.03□□□□□ -2.41
SAA2-SAA4A0A096LPE2 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.03□□□□□ -2.41
SAA2-SAA4A0A096LPE2 RNU6-982P-201ENST00000516216 102 ntBASIC-0.03□□□□□ -2.41
SAA2-SAA4A0A096LPE2 RNU6-70P-201ENST00000516438 60 ntBASIC-0.03□□□□□ -2.41
SAA2-SAA4A0A096LPE2 U7.4-201ENST00000614961 63 ntBASIC-0.03□□□□□ -2.41
SAA2-SAA4A0A096LPE2 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms