Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 MIR519A2-201ENST00000384990 87 ntBASIC1.79□□□□□ -2.12
DNMT3AQ9Y6K1 MIR517C-201ENST00000385103 95 ntBASIC1.79□□□□□ -2.12
DNMT3AQ9Y6K1 SNORD41.1-201ENST00000391000 69 ntBASIC1.79□□□□□ -2.12
DNMT3AQ9Y6K1 RNU6-1206P-201ENST00000516339 103 ntBASIC1.79□□□□□ -2.12
DNMT3AQ9Y6K1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
DNMT3AQ9Y6K1 Y_RNA.69-201ENST00000362885 109 ntBASIC1.78□□□□□ -2.12
DNMT3AQ9Y6K1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
DNMT3AQ9Y6K1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
DNMT3AQ9Y6K1 RNU6-742P-201ENST00000365289 107 ntBASIC1.77□□□□□ -2.13
DNMT3AQ9Y6K1 MIR644A-201ENST00000385262 94 ntBASIC1.77□□□□□ -2.13
DNMT3AQ9Y6K1 MIR652-201ENST00000385278 98 ntBASIC1.77□□□□□ -2.13
DNMT3AQ9Y6K1 MIR548E-201ENST00000408287 88 ntBASIC1.77□□□□□ -2.13
DNMT3AQ9Y6K1 MIR548L-201ENST00000408303 86 ntBASIC1.77□□□□□ -2.13
DNMT3AQ9Y6K1 AC012493.3-201ENST00000604494 112 ntBASIC1.77□□□□□ -2.13
DNMT3AQ9Y6K1 MIR6845-201ENST00000613182 61 ntBASIC1.77□□□□□ -2.13
DNMT3AQ9Y6K1 U6.96-201ENST00000636425 70 ntBASIC1.77□□□□□ -2.13
DNMT3AQ9Y6K1 SNORA7.1-201ENST00000363750 139 ntBASIC1.76□□□□□ -2.13
DNMT3AQ9Y6K1 SNORA25-201ENST00000384384 134 ntBASIC1.76□□□□□ -2.13
DNMT3AQ9Y6K1 MIR9-3-201ENST00000385084 90 ntBASIC1.76□□□□□ -2.13
DNMT3AQ9Y6K1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.76□□□□□ -2.13
DNMT3AQ9Y6K1 RNA5SP458-201ENST00000516188 119 ntBASIC1.76□□□□□ -2.13
DNMT3AQ9Y6K1 SCARNA17.3-201ENST00000516381 125 ntBASIC1.76□□□□□ -2.13
DNMT3AQ9Y6K1 MIR4255-201ENST00000579351 72 ntBASIC1.76□□□□□ -2.13
DNMT3AQ9Y6K1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
DNMT3AQ9Y6K1 MIR1-1-201ENST00000362147 71 ntBASIC1.75□□□□□ -2.13
DNMT3AQ9Y6K1 MIR1255B2-201ENST00000408618 67 ntBASIC1.75□□□□□ -2.13
DNMT3AQ9Y6K1 RNA5SP484-201ENST00000458857 111 ntBASIC1.75□□□□□ -2.13
DNMT3AQ9Y6K1 AC244669.1-204ENST00000621564 178 ntBASIC1.75□□□□□ -2.13
DNMT3AQ9Y6K1 RNU6-59P-201ENST00000384787 107 ntBASIC1.74□□□□□ -2.13
DNMT3AQ9Y6K1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
DNMT3AQ9Y6K1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.74□□□□□ -2.13
DNMT3AQ9Y6K1 MIR4419B-201ENST00000577260 68 ntBASIC1.74□□□□□ -2.13
DNMT3AQ9Y6K1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
DNMT3AQ9Y6K1 RNU6-716P-201ENST00000365621 103 ntBASIC1.73□□□□□ -2.13
DNMT3AQ9Y6K1 MIR520F-201ENST00000384824 87 ntBASIC1.73□□□□□ -2.13
DNMT3AQ9Y6K1 MIR100-201ENST00000385259 80 ntBASIC1.73□□□□□ -2.13
DNMT3AQ9Y6K1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.73□□□□□ -2.13
DNMT3AQ9Y6K1 AC003989.2-201ENST00000440224 169 ntBASIC1.73□□□□□ -2.13
DNMT3AQ9Y6K1 RNU7-151P-201ENST00000516930 53 ntBASIC1.73□□□□□ -2.13
DNMT3AQ9Y6K1 MIR548AE1-201ENST00000583292 70 ntBASIC1.73□□□□□ -2.13
DNMT3AQ9Y6K1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.73□□□□□ -2.13
DNMT3AQ9Y6K1 U2.18-201ENST00000622185 84 ntBASIC1.73□□□□□ -2.13
DNMT3AQ9Y6K1 AC084768.2-201ENST00000622736 221 ntBASIC1.73□□□□□ -2.13
DNMT3AQ9Y6K1 RNU6-726P-201ENST00000364680 107 ntBASIC1.72□□□□□ -2.13
DNMT3AQ9Y6K1 RNU6-458P-201ENST00000384179 107 ntBASIC1.72□□□□□ -2.13
DNMT3AQ9Y6K1 MIR516B1-201ENST00000385211 90 ntBASIC1.72□□□□□ -2.13
DNMT3AQ9Y6K1 AC002429.1-201ENST00000437672 148 ntBASIC1.72□□□□□ -2.13
DNMT3AQ9Y6K1 MIR4781-201ENST00000585250 76 ntBASIC1.72□□□□□ -2.13
DNMT3AQ9Y6K1 U6.58-201ENST00000613107 107 ntBASIC1.72□□□□□ -2.13
DNMT3AQ9Y6K1 MIR329-2-201ENST00000385029 84 ntBASIC1.71□□□□□ -2.14
DNMT3AQ9Y6K1 AL451105.1-201ENST00000450005 189 ntBASIC1.71□□□□□ -2.14
DNMT3AQ9Y6K1 RNU7-160P-201ENST00000516660 62 ntBASIC1.71□□□□□ -2.14
DNMT3AQ9Y6K1 RNA5SP327-201ENST00000362494 101 ntBASIC1.7□□□□□ -2.14
DNMT3AQ9Y6K1 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
DNMT3AQ9Y6K1 AC243829.3-201ENST00000622177 108 ntBASIC1.7□□□□□ -2.14
DNMT3AQ9Y6K1 RNU6-598P-201ENST00000364017 105 ntBASIC1.69□□□□□ -2.14
DNMT3AQ9Y6K1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.69□□□□□ -2.14
DNMT3AQ9Y6K1 Y_RNA.407-201ENST00000383986 113 ntBASIC1.69□□□□□ -2.14
DNMT3AQ9Y6K1 MIR1827-201ENST00000408549 66 ntBASIC1.69□□□□□ -2.14
DNMT3AQ9Y6K1 MIR548H4-201ENST00000408689 111 ntBASIC1.69□□□□□ -2.14
DNMT3AQ9Y6K1 AL603825.1-201ENST00000438481 80 ntBASIC1.69□□□□□ -2.14
DNMT3AQ9Y6K1 MIR4473-201ENST00000583731 91 ntBASIC1.69□□□□□ -2.14
DNMT3AQ9Y6K1 MIR4639-201ENST00000584938 69 ntBASIC1.69□□□□□ -2.14
DNMT3AQ9Y6K1 FABP5P4-201ENST00000437203 171 ntBASIC1.68□□□□□ -2.14
DNMT3AQ9Y6K1 SNORA25.15-201ENST00000516487 89 ntBASIC1.68□□□□□ -2.14
DNMT3AQ9Y6K1 RMST_2.1-201ENST00000617263 136 ntBASIC1.68□□□□□ -2.14
DNMT3AQ9Y6K1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
DNMT3AQ9Y6K1 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
DNMT3AQ9Y6K1 SNORD26-201ENST00000384147 75 ntBASIC1.67□□□□□ -2.14
DNMT3AQ9Y6K1 MIR3122-201ENST00000577243 73 ntBASIC1.67□□□□□ -2.14
DNMT3AQ9Y6K1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.67□□□□□ -2.14
DNMT3AQ9Y6K1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
DNMT3AQ9Y6K1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
DNMT3AQ9Y6K1 RNU6-945P-201ENST00000383947 107 ntBASIC1.66□□□□□ -2.14
DNMT3AQ9Y6K1 SNORA8.2-201ENST00000384372 139 ntBASIC1.66□□□□□ -2.14
DNMT3AQ9Y6K1 MIR19B1-201ENST00000384829 87 ntBASIC1.66□□□□□ -2.14
DNMT3AQ9Y6K1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
DNMT3AQ9Y6K1 MIR429-201ENST00000362106 83 ntBASIC1.65□□□□□ -2.15
DNMT3AQ9Y6K1 Y_RNA.164-201ENST00000363709 102 ntBASIC1.65□□□□□ -2.15
DNMT3AQ9Y6K1 RNU6-828P-201ENST00000364876 107 ntBASIC1.65□□□□□ -2.15
DNMT3AQ9Y6K1 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
DNMT3AQ9Y6K1 MIR29B1-201ENST00000385015 81 ntBASIC1.65□□□□□ -2.15
DNMT3AQ9Y6K1 AC002350.1-201ENST00000490759 375 ntBASIC1.65□□□□□ -2.15
DNMT3AQ9Y6K1 AC243829.6-201ENST00000612652 106 ntBASIC1.65□□□□□ -2.15
DNMT3AQ9Y6K1 Y_RNA.206-201ENST00000364136 102 ntBASIC1.64□□□□□ -2.15
DNMT3AQ9Y6K1 MIR200A-201ENST00000384875 90 ntBASIC1.64□□□□□ -2.15
DNMT3AQ9Y6K1 RPS29P23-201ENST00000458635 123 ntBASIC1.64□□□□□ -2.15
DNMT3AQ9Y6K1 RNU6-1110P-201ENST00000516462 101 ntBASIC1.64□□□□□ -2.15
DNMT3AQ9Y6K1 SNORD115-25-201ENST00000362619 82 ntBASIC1.63□□□□□ -2.15
DNMT3AQ9Y6K1 Y_RNA.139-201ENST00000363464 102 ntBASIC1.63□□□□□ -2.15
DNMT3AQ9Y6K1 SNORD18A-201ENST00000363753 72 ntBASIC1.63□□□□□ -2.15
DNMT3AQ9Y6K1 RNU6-974P-201ENST00000384099 108 ntBASIC1.63□□□□□ -2.15
DNMT3AQ9Y6K1 MIR125B1-201ENST00000385236 88 ntBASIC1.63□□□□□ -2.15
DNMT3AQ9Y6K1 SNORA67.5-201ENST00000391036 107 ntBASIC1.63□□□□□ -2.15
DNMT3AQ9Y6K1 RNU6-469P-201ENST00000516253 101 ntBASIC1.63□□□□□ -2.15
DNMT3AQ9Y6K1 RNA5SP47-201ENST00000517230 109 ntBASIC1.63□□□□□ -2.15
DNMT3AQ9Y6K1 MIR8081-201ENST00000611533 95 ntBASIC1.63□□□□□ -2.15
DNMT3AQ9Y6K1 RNA5SP190-201ENST00000365222 118 ntBASIC1.62□□□□□ -2.15
DNMT3AQ9Y6K1 SNORD111B-201ENST00000408587 80 ntBASIC1.62□□□□□ -2.15
DNMT3AQ9Y6K1 RNA5SP247-201ENST00000411181 105 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms