Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 SNORA8.2-201ENST00000384372 139 ntBASIC0.82□□□□□ -2.28
HS3ST4Q9Y661 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.82□□□□□ -2.28
HS3ST4Q9Y661 AC093423.1-201ENST00000440817 142 ntBASIC0.82□□□□□ -2.28
HS3ST4Q9Y661 RNU7-24P-201ENST00000458867 62 ntBASIC0.82□□□□□ -2.28
HS3ST4Q9Y661 AC139453.2-201ENST00000487255 133 ntBASIC0.82□□□□□ -2.28
HS3ST4Q9Y661 AC114801.3-201ENST00000510231 177 ntBASIC0.82□□□□□ -2.28
HS3ST4Q9Y661 RNA5SP268-201ENST00000516828 124 ntBASIC0.82□□□□□ -2.28
HS3ST4Q9Y661 RNA5SP94-201ENST00000516917 108 ntBASIC0.82□□□□□ -2.28
HS3ST4Q9Y661 MIR6828-201ENST00000636181 60 ntBASIC0.82□□□□□ -2.28
HS3ST4Q9Y661 SNORD45.1-201ENST00000363181 77 ntBASIC0.81□□□□□ -2.28
HS3ST4Q9Y661 SNORA36.2-201ENST00000384004 127 ntBASIC0.81□□□□□ -2.28
HS3ST4Q9Y661 MT-TY-201ENST00000387409 66 ntBASIC0.81□□□□□ -2.28
HS3ST4Q9Y661 RNU6-634P-201ENST00000459134 106 ntBASIC0.81□□□□□ -2.28
HS3ST4Q9Y661 MIR5000-201ENST00000577717 103 ntBASIC0.81□□□□□ -2.28
HS3ST4Q9Y661 SNORA36.1-201ENST00000363424 132 ntBASIC0.8□□□□□ -2.28
HS3ST4Q9Y661 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
HS3ST4Q9Y661 RNA5SP484-201ENST00000458857 111 ntBASIC0.8□□□□□ -2.28
HS3ST4Q9Y661 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.8□□□□□ -2.28
HS3ST4Q9Y661 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
HS3ST4Q9Y661 MIR6509-201ENST00000614603 85 ntBASIC0.8□□□□□ -2.28
HS3ST4Q9Y661 RNU6-1039P-201ENST00000383931 107 ntBASIC0.79□□□□□ -2.28
HS3ST4Q9Y661 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.79□□□□□ -2.28
HS3ST4Q9Y661 MIR8053-201ENST00000613344 75 ntBASIC0.79□□□□□ -2.28
HS3ST4Q9Y661 AL162376.1-201ENST00000624117 175 ntBASIC0.79□□□□□ -2.28
HS3ST4Q9Y661 RNU6-895P-201ENST00000384125 103 ntBASIC0.78□□□□□ -2.28
HS3ST4Q9Y661 AC073869.9-201ENST00000641610 120 ntBASIC0.78□□□□□ -2.28
HS3ST4Q9Y661 RNU6-649P-201ENST00000384463 107 ntBASIC0.77□□□□□ -2.29
HS3ST4Q9Y661 MIR203A-201ENST00000384836 110 ntBASIC0.77□□□□□ -2.29
HS3ST4Q9Y661 MIR598-201ENST00000384868 97 ntBASIC0.77□□□□□ -2.29
HS3ST4Q9Y661 RNU6-604P-201ENST00000390917 100 ntBASIC0.77□□□□□ -2.29
HS3ST4Q9Y661 SNORD30.1-201ENST00000391309 70 ntBASIC0.77□□□□□ -2.29
HS3ST4Q9Y661 SNORD42B-201ENST00000458893 67 ntBASIC0.77□□□□□ -2.29
HS3ST4Q9Y661 RNU5B-6P-201ENST00000516765 68 ntBASIC0.77□□□□□ -2.29
HS3ST4Q9Y661 MIR7107-201ENST00000611489 80 ntBASIC0.77□□□□□ -2.29
HS3ST4Q9Y661 AC069503.3-201ENST00000618674 145 ntBASIC0.77□□□□□ -2.29
HS3ST4Q9Y661 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
HS3ST4Q9Y661 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.76□□□□□ -2.29
HS3ST4Q9Y661 SNORD115-31-201ENST00000365318 82 ntBASIC0.76□□□□□ -2.29
HS3ST4Q9Y661 RNY1P8-201ENST00000383970 114 ntBASIC0.76□□□□□ -2.29
HS3ST4Q9Y661 SNORD45A-201ENST00000384512 84 ntBASIC0.76□□□□□ -2.29
HS3ST4Q9Y661 MIR140-201ENST00000385282 100 ntBASIC0.75□□□□□ -2.29
HS3ST4Q9Y661 AC006210.1-201ENST00000424882 111 ntBASIC0.75□□□□□ -2.29
HS3ST4Q9Y661 RNU6-539P-201ENST00000516665 103 ntBASIC0.75□□□□□ -2.29
HS3ST4Q9Y661 SNORD114-4-201ENST00000363962 75 ntBASIC0.74□□□□□ -2.29
HS3ST4Q9Y661 SNORD115-22-201ENST00000364456 82 ntBASIC0.74□□□□□ -2.29
HS3ST4Q9Y661 RNU6-540P-201ENST00000384622 101 ntBASIC0.74□□□□□ -2.29
HS3ST4Q9Y661 RNU6-663P-201ENST00000391105 106 ntBASIC0.74□□□□□ -2.29
HS3ST4Q9Y661 SNORD110-201ENST00000408189 75 ntBASIC0.74□□□□□ -2.29
HS3ST4Q9Y661 RNU6-881P-201ENST00000516813 102 ntBASIC0.74□□□□□ -2.29
HS3ST4Q9Y661 AC092634.7-201ENST00000621022 103 ntBASIC0.74□□□□□ -2.29
HS3ST4Q9Y661 MIR6835-201ENST00000621552 64 ntBASIC0.74□□□□□ -2.29
HS3ST4Q9Y661 RNU6-788P-201ENST00000390967 104 ntBASIC0.73□□□□□ -2.29
HS3ST4Q9Y661 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
HS3ST4Q9Y661 RNA5SP517-201ENST00000364724 117 ntBASIC0.72□□□□□ -2.29
HS3ST4Q9Y661 RNU6-260P-201ENST00000384092 107 ntBASIC0.72□□□□□ -2.29
HS3ST4Q9Y661 AC018659.1-201ENST00000551083 169 ntBASIC0.72□□□□□ -2.29
HS3ST4Q9Y661 MIR3657-201ENST00000584818 117 ntBASIC0.72□□□□□ -2.29
HS3ST4Q9Y661 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.72□□□□□ -2.29
HS3ST4Q9Y661 PVT1_3.1-201ENST00000620853 95 ntBASIC0.72□□□□□ -2.29
HS3ST4Q9Y661 SNORD113.1-201ENST00000363280 73 ntBASIC0.71□□□□□ -2.3
HS3ST4Q9Y661 RNU6-590P-201ENST00000365039 107 ntBASIC0.71□□□□□ -2.3
HS3ST4Q9Y661 MIR4752-201ENST00000579672 72 ntBASIC0.71□□□□□ -2.3
HS3ST4Q9Y661 MIR4714-201ENST00000580728 77 ntBASIC0.71□□□□□ -2.3
HS3ST4Q9Y661 MIR4473-201ENST00000583731 91 ntBASIC0.71□□□□□ -2.3
HS3ST4Q9Y661 Y_RNA.407-201ENST00000383986 113 ntBASIC0.7□□□□□ -2.3
HS3ST4Q9Y661 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
HS3ST4Q9Y661 MIR7-2-201ENST00000384970 110 ntBASIC0.7□□□□□ -2.3
HS3ST4Q9Y661 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
HS3ST4Q9Y661 SNORA25.18-201ENST00000607153 114 ntBASIC0.7□□□□□ -2.3
HS3ST4Q9Y661 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
HS3ST4Q9Y661 SNORA2.1-201ENST00000363089 137 ntBASIC0.69□□□□□ -2.3
HS3ST4Q9Y661 RNU6-990P-201ENST00000364385 104 ntBASIC0.69□□□□□ -2.3
HS3ST4Q9Y661 MIR146A-201ENST00000385201 99 ntBASIC0.69□□□□□ -2.3
HS3ST4Q9Y661 SNORD71-201ENST00000411292 86 ntBASIC0.69□□□□□ -2.3
HS3ST4Q9Y661 RNA5SP147-201ENST00000516493 109 ntBASIC0.69□□□□□ -2.3
HS3ST4Q9Y661 SNORA70.25-201ENST00000612741 95 ntBASIC0.69□□□□□ -2.3
HS3ST4Q9Y661 U6.111-201ENST00000636093 83 ntBASIC0.69□□□□□ -2.3
HS3ST4Q9Y661 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
HS3ST4Q9Y661 RNU6-1216P-201ENST00000362590 107 ntBASIC0.68□□□□□ -2.3
HS3ST4Q9Y661 Y_RNA.540-201ENST00000384638 111 ntBASIC0.68□□□□□ -2.3
HS3ST4Q9Y661 SNORA40.8-201ENST00000411034 126 ntBASIC0.68□□□□□ -2.3
HS3ST4Q9Y661 AC069271.1-201ENST00000445577 156 ntBASIC0.68□□□□□ -2.3
HS3ST4Q9Y661 RNA5SP436-201ENST00000516020 115 ntBASIC0.68□□□□□ -2.3
HS3ST4Q9Y661 RNA5SP480-201ENST00000516840 109 ntBASIC0.68□□□□□ -2.3
HS3ST4Q9Y661 MTND4LP1-201ENST00000446263 157 ntBASIC0.67□□□□□ -2.3
HS3ST4Q9Y661 RNU6-982P-201ENST00000516216 102 ntBASIC0.67□□□□□ -2.3
HS3ST4Q9Y661 RNU6-630P-201ENST00000391258 106 ntBASIC0.66□□□□□ -2.3
HS3ST4Q9Y661 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
HS3ST4Q9Y661 SNORD114-26-201ENST00000363543 72 ntBASIC0.65□□□□□ -2.31
HS3ST4Q9Y661 SNORD118-201ENST00000363593 134 ntBASIC0.65□□□□□ -2.31
HS3ST4Q9Y661 RNU6-800P-201ENST00000384473 103 ntBASIC0.65□□□□□ -2.31
HS3ST4Q9Y661 MIR652-201ENST00000385278 98 ntBASIC0.65□□□□□ -2.31
HS3ST4Q9Y661 SCARNA17.3-201ENST00000516381 125 ntBASIC0.65□□□□□ -2.31
HS3ST4Q9Y661 MIR548AE1-201ENST00000583292 70 ntBASIC0.65□□□□□ -2.31
HS3ST4Q9Y661 MIR6513-201ENST00000621188 64 ntBASIC0.65□□□□□ -2.31
HS3ST4Q9Y661 Y_RNA.443-201ENST00000384135 111 ntBASIC0.64□□□□□ -2.31
HS3ST4Q9Y661 AC125388.1-201ENST00000459631 156 ntBASIC0.64□□□□□ -2.31
HS3ST4Q9Y661 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
HS3ST4Q9Y661 MIR5706-201ENST00000579841 80 ntBASIC0.64□□□□□ -2.31
HS3ST4Q9Y661 uc_338.10-201ENST00000621872 182 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 209.9 ms