Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
HCFC2Q9Y5Z7 MIR4773-1-201ENST00000637203 78 ntBASIC1.05□□□□□ -2.24
HCFC2Q9Y5Z7 RNU6-540P-201ENST00000384622 101 ntBASIC1.04□□□□□ -2.24
HCFC2Q9Y5Z7 MIR532-201ENST00000385025 91 ntBASIC1.04□□□□□ -2.24
HCFC2Q9Y5Z7 MIR548L-201ENST00000408303 86 ntBASIC1.04□□□□□ -2.24
HCFC2Q9Y5Z7 AC244098.3-201ENST00000424803 96 ntBASIC1.04□□□□□ -2.24
HCFC2Q9Y5Z7 HAR1A.1-201ENST00000459583 118 ntBASIC1.04□□□□□ -2.24
HCFC2Q9Y5Z7 RNA5SP121-201ENST00000516537 101 ntBASIC1.04□□□□□ -2.24
HCFC2Q9Y5Z7 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
HCFC2Q9Y5Z7 AL109933.3-201ENST00000619095 188 ntBASIC1.04□□□□□ -2.24
HCFC2Q9Y5Z7 MIR18A-201ENST00000362310 71 ntBASIC1.03□□□□□ -2.24
HCFC2Q9Y5Z7 RNA5SP62-201ENST00000363457 110 ntBASIC1.03□□□□□ -2.24
HCFC2Q9Y5Z7 AL162376.1-201ENST00000624117 175 ntBASIC1.03□□□□□ -2.24
HCFC2Q9Y5Z7 SNORD99-201ENST00000408612 74 ntBASIC1.02□□□□□ -2.25
HCFC2Q9Y5Z7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HCFC2Q9Y5Z7 RNA5SP330-201ENST00000517096 96 ntBASIC1.02□□□□□ -2.25
HCFC2Q9Y5Z7 AC010487.4-201ENST00000637027 61 ntBASIC1.02□□□□□ -2.25
HCFC2Q9Y5Z7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
HCFC2Q9Y5Z7 RNU1-141P-201ENST00000364623 158 ntBASIC1.01□□□□□ -2.25
HCFC2Q9Y5Z7 RNU6-1039P-201ENST00000383931 107 ntBASIC1.01□□□□□ -2.25
HCFC2Q9Y5Z7 RNU6-649P-201ENST00000384463 107 ntBASIC1.01□□□□□ -2.25
HCFC2Q9Y5Z7 MIR4698-201ENST00000577795 80 ntBASIC1.01□□□□□ -2.25
HCFC2Q9Y5Z7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.01□□□□□ -2.25
HCFC2Q9Y5Z7 SNORD114-23-201ENST00000363536 72 ntBASIC1□□□□□ -2.25
HCFC2Q9Y5Z7 SNORD115-31-201ENST00000365318 82 ntBASIC1□□□□□ -2.25
HCFC2Q9Y5Z7 AL691482.2-201ENST00000457453 84 ntBASIC1□□□□□ -2.25
HCFC2Q9Y5Z7 AC011195.1-201ENST00000578177 177 ntBASIC1□□□□□ -2.25
HCFC2Q9Y5Z7 AL353765.1-201ENST00000605514 183 ntBASIC1□□□□□ -2.25
HCFC2Q9Y5Z7 SNORD45.1-201ENST00000363181 77 ntBASIC0.99□□□□□ -2.25
HCFC2Q9Y5Z7 RNU6V-201ENST00000384105 107 ntBASIC0.99□□□□□ -2.25
HCFC2Q9Y5Z7 RNU6-269P-201ENST00000391077 97 ntBASIC0.99□□□□□ -2.25
HCFC2Q9Y5Z7 MIR1285-1-201ENST00000408593 84 ntBASIC0.99□□□□□ -2.25
HCFC2Q9Y5Z7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.99□□□□□ -2.25
HCFC2Q9Y5Z7 MIR4460-201ENST00000577862 86 ntBASIC0.99□□□□□ -2.25
HCFC2Q9Y5Z7 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
HCFC2Q9Y5Z7 AC073869.9-201ENST00000641610 120 ntBASIC0.99□□□□□ -2.25
HCFC2Q9Y5Z7 SNORD115-22-201ENST00000364456 82 ntBASIC0.98□□□□□ -2.25
HCFC2Q9Y5Z7 RNU6-54P-201ENST00000365563 107 ntBASIC0.98□□□□□ -2.25
HCFC2Q9Y5Z7 RNU6-716P-201ENST00000365621 103 ntBASIC0.98□□□□□ -2.25
HCFC2Q9Y5Z7 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
HCFC2Q9Y5Z7 AC069503.3-201ENST00000618674 145 ntBASIC0.98□□□□□ -2.25
HCFC2Q9Y5Z7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.98□□□□□ -2.25
HCFC2Q9Y5Z7 SNORA36.1-201ENST00000363424 132 ntBASIC0.97□□□□□ -2.25
HCFC2Q9Y5Z7 RNU6-663P-201ENST00000391105 106 ntBASIC0.97□□□□□ -2.25
HCFC2Q9Y5Z7 NAMPTP3-201ENST00000569273 224 ntBASIC0.97□□□□□ -2.25
HCFC2Q9Y5Z7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
HCFC2Q9Y5Z7 SNORD114-4-201ENST00000363962 75 ntBASIC0.96□□□□□ -2.26
HCFC2Q9Y5Z7 SNORD30.1-201ENST00000391309 70 ntBASIC0.96□□□□□ -2.26
HCFC2Q9Y5Z7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.96□□□□□ -2.26
HCFC2Q9Y5Z7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
HCFC2Q9Y5Z7 RNA5SP227-201ENST00000516184 113 ntBASIC0.96□□□□□ -2.26
HCFC2Q9Y5Z7 RNA5SP94-201ENST00000516917 108 ntBASIC0.96□□□□□ -2.26
HCFC2Q9Y5Z7 MIR8087-201ENST00000612745 78 ntBASIC0.96□□□□□ -2.26
HCFC2Q9Y5Z7 MIR6513-201ENST00000621188 64 ntBASIC0.96□□□□□ -2.26
HCFC2Q9Y5Z7 U6.111-201ENST00000636093 83 ntBASIC0.96□□□□□ -2.26
HCFC2Q9Y5Z7 Y_RNA.386-201ENST00000383913 105 ntBASIC0.95□□□□□ -2.26
HCFC2Q9Y5Z7 SNORD42B-201ENST00000458893 67 ntBASIC0.95□□□□□ -2.26
HCFC2Q9Y5Z7 RNU6-881P-201ENST00000516813 102 ntBASIC0.95□□□□□ -2.26
HCFC2Q9Y5Z7 RNA5SP268-201ENST00000516828 124 ntBASIC0.95□□□□□ -2.26
HCFC2Q9Y5Z7 MIR6509-201ENST00000614603 85 ntBASIC0.95□□□□□ -2.26
HCFC2Q9Y5Z7 RNU6-895P-201ENST00000384125 103 ntBASIC0.94□□□□□ -2.26
HCFC2Q9Y5Z7 RNU6-604P-201ENST00000390917 100 ntBASIC0.94□□□□□ -2.26
HCFC2Q9Y5Z7 RNU6-1216P-201ENST00000362590 107 ntBASIC0.93□□□□□ -2.26
HCFC2Q9Y5Z7 SNORD113.1-201ENST00000363280 73 ntBASIC0.93□□□□□ -2.26
HCFC2Q9Y5Z7 RNU6-260P-201ENST00000384092 107 ntBASIC0.93□□□□□ -2.26
HCFC2Q9Y5Z7 SNORD45A-201ENST00000384512 84 ntBASIC0.93□□□□□ -2.26
HCFC2Q9Y5Z7 RNA5SP484-201ENST00000458857 111 ntBASIC0.93□□□□□ -2.26
HCFC2Q9Y5Z7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.93□□□□□ -2.26
HCFC2Q9Y5Z7 MIR4714-201ENST00000580728 77 ntBASIC0.93□□□□□ -2.26
HCFC2Q9Y5Z7 MIR330-201ENST00000362196 94 ntBASIC0.92□□□□□ -2.26
HCFC2Q9Y5Z7 SNORA2.1-201ENST00000363089 137 ntBASIC0.92□□□□□ -2.26
HCFC2Q9Y5Z7 RNU6-800P-201ENST00000384473 103 ntBASIC0.92□□□□□ -2.26
HCFC2Q9Y5Z7 MIR3657-201ENST00000584818 117 ntBASIC0.92□□□□□ -2.26
HCFC2Q9Y5Z7 Y_RNA.250-201ENST00000364542 110 ntBASIC0.91□□□□□ -2.26
HCFC2Q9Y5Z7 RNU6-35P-201ENST00000384530 107 ntBASIC0.91□□□□□ -2.26
HCFC2Q9Y5Z7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
HCFC2Q9Y5Z7 MIR936-201ENST00000401264 98 ntBASIC0.91□□□□□ -2.26
HCFC2Q9Y5Z7 MIR7107-201ENST00000611489 80 ntBASIC0.91□□□□□ -2.26
HCFC2Q9Y5Z7 RNU6-471P-201ENST00000383944 106 ntBASIC0.9□□□□□ -2.27
HCFC2Q9Y5Z7 SNORD116-24-201ENST00000384549 92 ntBASIC0.9□□□□□ -2.27
HCFC2Q9Y5Z7 SNORA25.4-201ENST00000363666 124 ntBASIC0.89□□□□□ -2.27
HCFC2Q9Y5Z7 Y_RNA.443-201ENST00000384135 111 ntBASIC0.89□□□□□ -2.27
HCFC2Q9Y5Z7 MIR608-201ENST00000384820 100 ntBASIC0.89□□□□□ -2.27
HCFC2Q9Y5Z7 RNA5SP222-201ENST00000411039 105 ntBASIC0.89□□□□□ -2.27
HCFC2Q9Y5Z7 AC125388.1-201ENST00000459631 156 ntBASIC0.89□□□□□ -2.27
HCFC2Q9Y5Z7 MIR5706-201ENST00000579841 80 ntBASIC0.89□□□□□ -2.27
HCFC2Q9Y5Z7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
HCFC2Q9Y5Z7 MIR1265-201ENST00000408444 86 ntBASIC0.88□□□□□ -2.27
HCFC2Q9Y5Z7 AC005520.4-201ENST00000604337 90 ntBASIC0.88□□□□□ -2.27
HCFC2Q9Y5Z7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.88□□□□□ -2.27
HCFC2Q9Y5Z7 MIR140-201ENST00000385282 100 ntBASIC0.87□□□□□ -2.27
HCFC2Q9Y5Z7 MTND4LP1-201ENST00000446263 157 ntBASIC0.87□□□□□ -2.27
HCFC2Q9Y5Z7 RNU5B-6P-201ENST00000516765 68 ntBASIC0.87□□□□□ -2.27
HCFC2Q9Y5Z7 SNORA40.17-201ENST00000517256 115 ntBASIC0.87□□□□□ -2.27
HCFC2Q9Y5Z7 AC018659.1-201ENST00000551083 169 ntBASIC0.87□□□□□ -2.27
HCFC2Q9Y5Z7 MIR6739-201ENST00000622461 75 ntBASIC0.87□□□□□ -2.27
HCFC2Q9Y5Z7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
HCFC2Q9Y5Z7 Y_RNA.407-201ENST00000383986 113 ntBASIC0.86□□□□□ -2.27
HCFC2Q9Y5Z7 RNU6-110P-201ENST00000384508 104 ntBASIC0.86□□□□□ -2.27
HCFC2Q9Y5Z7 RNU6-630P-201ENST00000391258 106 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms