Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RNU6-719P-201ENST00000516671 104 ntBASIC0.29□□□□□ -2.36
RAI2Q9Y5P3 YWHAEP2-201ENST00000580066 112 ntBASIC0.29□□□□□ -2.36
RAI2Q9Y5P3 MIR4493-201ENST00000584016 73 ntBASIC0.29□□□□□ -2.36
RAI2Q9Y5P3 SNORA63.2-201ENST00000362603 126 ntBASIC0.28□□□□□ -2.36
RAI2Q9Y5P3 RNU6-633P-201ENST00000362612 103 ntBASIC0.28□□□□□ -2.36
RAI2Q9Y5P3 RNU6-1051P-201ENST00000365471 102 ntBASIC0.28□□□□□ -2.36
RAI2Q9Y5P3 MT-TY-201ENST00000387409 66 ntBASIC0.28□□□□□ -2.36
RAI2Q9Y5P3 Y_RNA.620-201ENST00000411009 88 ntBASIC0.28□□□□□ -2.36
RAI2Q9Y5P3 AC093423.1-201ENST00000440817 142 ntBASIC0.28□□□□□ -2.36
RAI2Q9Y5P3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.28□□□□□ -2.36
RAI2Q9Y5P3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.28□□□□□ -2.36
RAI2Q9Y5P3 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
RAI2Q9Y5P3 RNA5SP170-201ENST00000517150 101 ntBASIC0.28□□□□□ -2.36
RAI2Q9Y5P3 MIR4473-201ENST00000583731 91 ntBASIC0.28□□□□□ -2.36
RAI2Q9Y5P3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.28□□□□□ -2.36
RAI2Q9Y5P3 MIR604-201ENST00000384880 94 ntBASIC0.27□□□□□ -2.37
RAI2Q9Y5P3 MIR5582-201ENST00000579697 68 ntBASIC0.27□□□□□ -2.37
RAI2Q9Y5P3 AC108676.2-201ENST00000605225 163 ntBASIC0.27□□□□□ -2.37
RAI2Q9Y5P3 RNU6-294P-201ENST00000364999 102 ntBASIC0.26□□□□□ -2.37
RAI2Q9Y5P3 RNU6-815P-201ENST00000384080 113 ntBASIC0.26□□□□□ -2.37
RAI2Q9Y5P3 Y_RNA.558-201ENST00000384685 113 ntBASIC0.26□□□□□ -2.37
RAI2Q9Y5P3 AC069113.3-201ENST00000521019 150 ntBASIC0.26□□□□□ -2.37
RAI2Q9Y5P3 RNU1-29P-201ENST00000606574 126 ntBASIC0.26□□□□□ -2.37
RAI2Q9Y5P3 IGLL4P-201ENST00000614590 133 ntBASIC0.26□□□□□ -2.37
RAI2Q9Y5P3 Y_RNA.17-201ENST00000362433 111 ntBASIC0.25□□□□□ -2.37
RAI2Q9Y5P3 SNORD114-31-201ENST00000363219 75 ntBASIC0.25□□□□□ -2.37
RAI2Q9Y5P3 SNORD115-27-201ENST00000364430 82 ntBASIC0.25□□□□□ -2.37
RAI2Q9Y5P3 Y_RNA.369-201ENST00000365568 117 ntBASIC0.25□□□□□ -2.37
RAI2Q9Y5P3 RNU6V-201ENST00000384105 107 ntBASIC0.25□□□□□ -2.37
RAI2Q9Y5P3 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
RAI2Q9Y5P3 RNU5B-6P-201ENST00000516765 68 ntBASIC0.25□□□□□ -2.37
RAI2Q9Y5P3 MIR548O2-201ENST00000616090 70 ntBASIC0.25□□□□□ -2.37
RAI2Q9Y5P3 MIR499B-201ENST00000636498 73 ntBASIC0.25□□□□□ -2.37
RAI2Q9Y5P3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.24□□□□□ -2.37
RAI2Q9Y5P3 RNY1P1-201ENST00000364372 112 ntBASIC0.24□□□□□ -2.37
RAI2Q9Y5P3 RNU6-652P-201ENST00000365488 107 ntBASIC0.24□□□□□ -2.37
RAI2Q9Y5P3 MIR1468-201ENST00000410600 86 ntBASIC0.24□□□□□ -2.37
RAI2Q9Y5P3 AC104692.1-201ENST00000472406 90 ntBASIC0.24□□□□□ -2.37
RAI2Q9Y5P3 MIR3140-201ENST00000583685 90 ntBASIC0.24□□□□□ -2.37
RAI2Q9Y5P3 AP001180.6-201ENST00000584918 159 ntBASIC0.24□□□□□ -2.37
RAI2Q9Y5P3 uc_338.10-201ENST00000621872 182 ntBASIC0.24□□□□□ -2.37
RAI2Q9Y5P3 RNU6-219P-201ENST00000364728 107 ntBASIC0.23□□□□□ -2.37
RAI2Q9Y5P3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.23□□□□□ -2.37
RAI2Q9Y5P3 MIR501-201ENST00000390204 84 ntBASIC0.23□□□□□ -2.37
RAI2Q9Y5P3 Y_RNA.611-201ENST00000410682 108 ntBASIC0.23□□□□□ -2.37
RAI2Q9Y5P3 AC093729.1-201ENST00000513074 128 ntBASIC0.23□□□□□ -2.37
RAI2Q9Y5P3 SNORA25.13-201ENST00000516395 103 ntBASIC0.23□□□□□ -2.37
RAI2Q9Y5P3 RNU7-153P-201ENST00000516455 62 ntBASIC0.23□□□□□ -2.37
RAI2Q9Y5P3 RNU6-267P-201ENST00000516714 103 ntBASIC0.23□□□□□ -2.37
RAI2Q9Y5P3 MIR4315-1-201ENST00000636800 73 ntBASIC0.23□□□□□ -2.37
RAI2Q9Y5P3 MIR4315-2-201ENST00000640925 73 ntBASIC0.23□□□□□ -2.37
RAI2Q9Y5P3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.23□□□□□ -2.37
RAI2Q9Y5P3 SNORD95.1-201ENST00000364099 68 ntBASIC0.22□□□□□ -2.37
RAI2Q9Y5P3 HMGN2P22-201ENST00000427588 175 ntBASIC0.22□□□□□ -2.37
RAI2Q9Y5P3 AC084368.1-201ENST00000620935 65 ntBASIC0.22□□□□□ -2.37
RAI2Q9Y5P3 RNU6-675P-201ENST00000384236 104 ntBASIC0.21□□□□□ -2.38
RAI2Q9Y5P3 MIR516B1-201ENST00000385211 90 ntBASIC0.21□□□□□ -2.38
RAI2Q9Y5P3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
RAI2Q9Y5P3 Y_RNA.610-201ENST00000410681 103 ntBASIC0.21□□□□□ -2.38
RAI2Q9Y5P3 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
RAI2Q9Y5P3 MIR4677-201ENST00000584153 80 ntBASIC0.21□□□□□ -2.38
RAI2Q9Y5P3 MIR548AD-201ENST00000584780 82 ntBASIC0.21□□□□□ -2.38
RAI2Q9Y5P3 MIR4768-201ENST00000585270 74 ntBASIC0.21□□□□□ -2.38
RAI2Q9Y5P3 MIR548BB-201ENST00000626714 66 ntBASIC0.21□□□□□ -2.38
RAI2Q9Y5P3 SNORD114-4-201ENST00000363962 75 ntBASIC0.2□□□□□ -2.38
RAI2Q9Y5P3 Y_RNA.437-201ENST00000384113 113 ntBASIC0.2□□□□□ -2.38
RAI2Q9Y5P3 MIR643-201ENST00000385267 97 ntBASIC0.2□□□□□ -2.38
RAI2Q9Y5P3 RNU6-127P-201ENST00000390897 107 ntBASIC0.2□□□□□ -2.38
RAI2Q9Y5P3 RNU6-1177P-201ENST00000391058 104 ntBASIC0.2□□□□□ -2.38
RAI2Q9Y5P3 Y_RNA.593-201ENST00000410292 98 ntBASIC0.2□□□□□ -2.38
RAI2Q9Y5P3 RNU6-1298P-201ENST00000362456 101 ntBASIC0.19□□□□□ -2.38
RAI2Q9Y5P3 RNU6-54P-201ENST00000365563 107 ntBASIC0.19□□□□□ -2.38
RAI2Q9Y5P3 MIR610-201ENST00000385139 96 ntBASIC0.19□□□□□ -2.38
RAI2Q9Y5P3 AL450471.1-201ENST00000447509 127 ntBASIC0.19□□□□□ -2.38
RAI2Q9Y5P3 RNU6-762P-201ENST00000517107 102 ntBASIC0.19□□□□□ -2.38
RAI2Q9Y5P3 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.19□□□□□ -2.38
RAI2Q9Y5P3 AC006254.2-201ENST00000603259 279 ntBASIC0.19□□□□□ -2.38
RAI2Q9Y5P3 SNORA75.1-201ENST00000391130 148 ntBASIC0.18□□□□□ -2.38
RAI2Q9Y5P3 SNORD90-201ENST00000391145 111 ntBASIC0.18□□□□□ -2.38
RAI2Q9Y5P3 MIR371B-201ENST00000638082 66 ntBASIC0.18□□□□□ -2.38
RAI2Q9Y5P3 RNU6-154P-201ENST00000384306 106 ntBASIC0.17□□□□□ -2.38
RAI2Q9Y5P3 MIR450A2-201ENST00000385022 100 ntBASIC0.17□□□□□ -2.38
RAI2Q9Y5P3 MIR892B-201ENST00000401279 77 ntBASIC0.17□□□□□ -2.38
RAI2Q9Y5P3 SNORD57-201ENST00000448188 72 ntBASIC0.17□□□□□ -2.38
RAI2Q9Y5P3 RNU6-782P-201ENST00000516852 104 ntBASIC0.17□□□□□ -2.38
RAI2Q9Y5P3 Y_RNA.43-201ENST00000362670 111 ntBASIC0.16□□□□□ -2.38
RAI2Q9Y5P3 RNU6-1255P-201ENST00000363434 112 ntBASIC0.16□□□□□ -2.38
RAI2Q9Y5P3 SNORD114-29-201ENST00000364819 70 ntBASIC0.16□□□□□ -2.38
RAI2Q9Y5P3 Y_RNA.426-201ENST00000384068 113 ntBASIC0.16□□□□□ -2.38
RAI2Q9Y5P3 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
RAI2Q9Y5P3 AC097510.1-201ENST00000510945 133 ntBASIC0.16□□□□□ -2.38
RAI2Q9Y5P3 AC006160.2-201ENST00000637708 154 ntBASIC0.16□□□□□ -2.38
RAI2Q9Y5P3 MIR494-201ENST00000349529 81 ntBASIC0.15□□□□□ -2.39
RAI2Q9Y5P3 RNU6-208P-201ENST00000362431 107 ntBASIC0.15□□□□□ -2.39
RAI2Q9Y5P3 Y_RNA.264-201ENST00000364665 102 ntBASIC0.15□□□□□ -2.39
RAI2Q9Y5P3 SNORA24B-201ENST00000384176 131 ntBASIC0.15□□□□□ -2.39
RAI2Q9Y5P3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
RAI2Q9Y5P3 SNORD77.2-201ENST00000391045 68 ntBASIC0.15□□□□□ -2.39
RAI2Q9Y5P3 SNX3P1X-201ENST00000414887 175 ntBASIC0.15□□□□□ -2.39
RAI2Q9Y5P3 SCARNA11.2-201ENST00000517183 154 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 266.5 ms