Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
HCN4Q9Y3Q4 MIR548L-201ENST00000408303 86 ntBASIC1.4□□□□□ -2.19
HCN4Q9Y3Q4 SCARNA16.5-201ENST00000517114 183 ntBASIC1.4□□□□□ -2.19
HCN4Q9Y3Q4 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
HCN4Q9Y3Q4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HCN4Q9Y3Q4 RNU6-895P-201ENST00000384125 103 ntBASIC1.39□□□□□ -2.19
HCN4Q9Y3Q4 RNU6-939P-201ENST00000384634 107 ntBASIC1.39□□□□□ -2.19
HCN4Q9Y3Q4 NAMPTP3-201ENST00000569273 224 ntBASIC1.39□□□□□ -2.19
HCN4Q9Y3Q4 MIR6828-201ENST00000636181 60 ntBASIC1.39□□□□□ -2.19
HCN4Q9Y3Q4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
HCN4Q9Y3Q4 RNU6-881P-201ENST00000516813 102 ntBASIC1.38□□□□□ -2.19
HCN4Q9Y3Q4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.38□□□□□ -2.19
HCN4Q9Y3Q4 MIR3660-201ENST00000584845 100 ntBASIC1.38□□□□□ -2.19
HCN4Q9Y3Q4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
HCN4Q9Y3Q4 SNORD113.1-201ENST00000363280 73 ntBASIC1.37□□□□□ -2.19
HCN4Q9Y3Q4 RNU1-141P-201ENST00000364623 158 ntBASIC1.37□□□□□ -2.19
HCN4Q9Y3Q4 RNU6-54P-201ENST00000365563 107 ntBASIC1.37□□□□□ -2.19
HCN4Q9Y3Q4 RNU6-716P-201ENST00000365621 103 ntBASIC1.37□□□□□ -2.19
HCN4Q9Y3Q4 RNU6V-201ENST00000384105 107 ntBASIC1.37□□□□□ -2.19
HCN4Q9Y3Q4 SNORA8.2-201ENST00000384372 139 ntBASIC1.37□□□□□ -2.19
HCN4Q9Y3Q4 RNU6-1216P-201ENST00000362590 107 ntBASIC1.36□□□□□ -2.19
HCN4Q9Y3Q4 Y_RNA.340-201ENST00000365330 92 ntBASIC1.36□□□□□ -2.19
HCN4Q9Y3Q4 RNU6-604P-201ENST00000390917 100 ntBASIC1.36□□□□□ -2.19
HCN4Q9Y3Q4 MIR1265-201ENST00000408444 86 ntBASIC1.36□□□□□ -2.19
HCN4Q9Y3Q4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.36□□□□□ -2.19
HCN4Q9Y3Q4 MIR4460-201ENST00000577862 86 ntBASIC1.36□□□□□ -2.19
HCN4Q9Y3Q4 MIR6509-201ENST00000614603 85 ntBASIC1.36□□□□□ -2.19
HCN4Q9Y3Q4 RNU4-45P-201ENST00000365469 141 ntBASIC1.35□□□□□ -2.19
HCN4Q9Y3Q4 RNU6-269P-201ENST00000391077 97 ntBASIC1.35□□□□□ -2.19
HCN4Q9Y3Q4 SNORA40.6-201ENST00000391153 128 ntBASIC1.35□□□□□ -2.19
HCN4Q9Y3Q4 SNORD42B-201ENST00000458893 67 ntBASIC1.35□□□□□ -2.19
HCN4Q9Y3Q4 AC087343.1-201ENST00000477341 475 ntBASIC1.35□□□□□ -2.19
HCN4Q9Y3Q4 MIR18A-201ENST00000362310 71 ntBASIC1.34□□□□□ -2.19
HCN4Q9Y3Q4 RNU6-471P-201ENST00000383944 106 ntBASIC1.34□□□□□ -2.19
HCN4Q9Y3Q4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.34□□□□□ -2.19
HCN4Q9Y3Q4 AC211469.2-201ENST00000605461 205 ntBASIC1.34□□□□□ -2.19
HCN4Q9Y3Q4 RNU6-260P-201ENST00000384092 107 ntBASIC1.33□□□□□ -2.2
HCN4Q9Y3Q4 SNORD99-201ENST00000408612 74 ntBASIC1.33□□□□□ -2.2
HCN4Q9Y3Q4 MIR4295-201ENST00000585286 85 ntBASIC1.33□□□□□ -2.2
HCN4Q9Y3Q4 AC005520.4-201ENST00000604337 90 ntBASIC1.33□□□□□ -2.2
HCN4Q9Y3Q4 MIR8087-201ENST00000612745 78 ntBASIC1.33□□□□□ -2.2
HCN4Q9Y3Q4 AL162376.1-201ENST00000624117 175 ntBASIC1.33□□□□□ -2.2
HCN4Q9Y3Q4 AC010487.4-201ENST00000637027 61 ntBASIC1.33□□□□□ -2.2
HCN4Q9Y3Q4 SNORD114-23-201ENST00000363536 72 ntBASIC1.32□□□□□ -2.2
HCN4Q9Y3Q4 SNORD116-24-201ENST00000384549 92 ntBASIC1.32□□□□□ -2.2
HCN4Q9Y3Q4 RNU6-630P-201ENST00000391258 106 ntBASIC1.32□□□□□ -2.2
HCN4Q9Y3Q4 AC011195.1-201ENST00000578177 177 ntBASIC1.32□□□□□ -2.2
HCN4Q9Y3Q4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
HCN4Q9Y3Q4 AC073869.9-201ENST00000641610 120 ntBASIC1.31□□□□□ -2.2
HCN4Q9Y3Q4 Y_RNA.443-201ENST00000384135 111 ntBASIC1.3□□□□□ -2.2
HCN4Q9Y3Q4 MIR3657-201ENST00000584818 117 ntBASIC1.3□□□□□ -2.2
HCN4Q9Y3Q4 AC069503.3-201ENST00000618674 145 ntBASIC1.3□□□□□ -2.2
HCN4Q9Y3Q4 SNORA25.4-201ENST00000363666 124 ntBASIC1.29□□□□□ -2.2
HCN4Q9Y3Q4 SNORD114-4-201ENST00000363962 75 ntBASIC1.28□□□□□ -2.2
HCN4Q9Y3Q4 MIR203A-201ENST00000384836 110 ntBASIC1.28□□□□□ -2.2
HCN4Q9Y3Q4 MIR758-201ENST00000390227 88 ntBASIC1.28□□□□□ -2.2
HCN4Q9Y3Q4 CYP3A137P-201ENST00000562436 69 ntBASIC1.28□□□□□ -2.2
HCN4Q9Y3Q4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
HCN4Q9Y3Q4 SNORA36.1-201ENST00000363424 132 ntBASIC1.27□□□□□ -2.21
HCN4Q9Y3Q4 RNA5SP484-201ENST00000458857 111 ntBASIC1.27□□□□□ -2.21
HCN4Q9Y3Q4 RNA5SP227-201ENST00000516184 113 ntBASIC1.27□□□□□ -2.21
HCN4Q9Y3Q4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.27□□□□□ -2.21
HCN4Q9Y3Q4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
HCN4Q9Y3Q4 RNA5SP268-201ENST00000516828 124 ntBASIC1.26□□□□□ -2.21
HCN4Q9Y3Q4 SNORA2.1-201ENST00000363089 137 ntBASIC1.25□□□□□ -2.21
HCN4Q9Y3Q4 RNU6-982P-201ENST00000516216 102 ntBASIC1.25□□□□□ -2.21
HCN4Q9Y3Q4 RNA5SP94-201ENST00000516917 108 ntBASIC1.25□□□□□ -2.21
HCN4Q9Y3Q4 MIR4661-201ENST00000582720 75 ntBASIC1.25□□□□□ -2.21
HCN4Q9Y3Q4 AL353765.1-201ENST00000605514 183 ntBASIC1.25□□□□□ -2.21
HCN4Q9Y3Q4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HCN4Q9Y3Q4 RNU5B-6P-201ENST00000516765 68 ntBASIC1.24□□□□□ -2.21
HCN4Q9Y3Q4 AC018659.1-201ENST00000551083 169 ntBASIC1.24□□□□□ -2.21
HCN4Q9Y3Q4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.23□□□□□ -2.21
HCN4Q9Y3Q4 MTND4LP1-201ENST00000446263 157 ntBASIC1.23□□□□□ -2.21
HCN4Q9Y3Q4 SNORA40.17-201ENST00000517256 115 ntBASIC1.23□□□□□ -2.21
HCN4Q9Y3Q4 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
HCN4Q9Y3Q4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.21
HCN4Q9Y3Q4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.21□□□□□ -2.22
HCN4Q9Y3Q4 MIR330-201ENST00000362196 94 ntBASIC1.21□□□□□ -2.22
HCN4Q9Y3Q4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.21□□□□□ -2.22
HCN4Q9Y3Q4 AC103706.3-201ENST00000636297 85 ntBASIC1.21□□□□□ -2.22
HCN4Q9Y3Q4 Y_RNA.250-201ENST00000364542 110 ntBASIC1.2□□□□□ -2.22
HCN4Q9Y3Q4 MIR4511-201ENST00000582784 87 ntBASIC1.2□□□□□ -2.22
HCN4Q9Y3Q4 MIR6513-201ENST00000621188 64 ntBASIC1.2□□□□□ -2.22
HCN4Q9Y3Q4 MIR6739-201ENST00000622461 75 ntBASIC1.2□□□□□ -2.22
HCN4Q9Y3Q4 RNU6-668P-201ENST00000364180 107 ntBASIC1.19□□□□□ -2.22
HCN4Q9Y3Q4 RNU6-990P-201ENST00000364385 104 ntBASIC1.19□□□□□ -2.22
HCN4Q9Y3Q4 RNU6-645P-201ENST00000364649 106 ntBASIC1.19□□□□□ -2.22
HCN4Q9Y3Q4 RNA5SP222-201ENST00000411039 105 ntBASIC1.19□□□□□ -2.22
HCN4Q9Y3Q4 MIR7107-201ENST00000611489 80 ntBASIC1.19□□□□□ -2.22
HCN4Q9Y3Q4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HCN4Q9Y3Q4 MIR1197-201ENST00000408818 88 ntBASIC1.17□□□□□ -2.22
HCN4Q9Y3Q4 Y_RNA.407-201ENST00000383986 113 ntBASIC1.16□□□□□ -2.22
HCN4Q9Y3Q4 SNORD110-201ENST00000408189 75 ntBASIC1.16□□□□□ -2.22
HCN4Q9Y3Q4 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
HCN4Q9Y3Q4 MIR6857-201ENST00000613267 93 ntBASIC1.16□□□□□ -2.22
HCN4Q9Y3Q4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.16□□□□□ -2.22
HCN4Q9Y3Q4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.23
HCN4Q9Y3Q4 MIR373-201ENST00000362273 69 ntBASIC1.15□□□□□ -2.23
HCN4Q9Y3Q4 AC006210.1-201ENST00000424882 111 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms