Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.02□□□□□ -2.09
LHX6Q9UPM6 SCARNA16.5-201ENST00000517114 183 ntBASIC2.02□□□□□ -2.09
LHX6Q9UPM6 SNORA70.22-201ENST00000517160 124 ntBASIC2.02□□□□□ -2.09
LHX6Q9UPM6 U6.96-201ENST00000636425 70 ntBASIC2.02□□□□□ -2.09
LHX6Q9UPM6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LHX6Q9UPM6 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
LHX6Q9UPM6 RNA5SP182-201ENST00000516064 82 ntBASIC2.01□□□□□ -2.09
LHX6Q9UPM6 RNU1-92P-201ENST00000517017 135 ntBASIC2.01□□□□□ -2.09
LHX6Q9UPM6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
LHX6Q9UPM6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LHX6Q9UPM6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
LHX6Q9UPM6 MIR3678-201ENST00000578455 94 ntBASIC2□□□□□ -2.09
LHX6Q9UPM6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LHX6Q9UPM6 MIRLET7G-201ENST00000362280 84 ntBASIC1.99□□□□□ -2.09
LHX6Q9UPM6 RNU6-246P-201ENST00000384702 107 ntBASIC1.99□□□□□ -2.09
LHX6Q9UPM6 RNU6-1110P-201ENST00000516462 101 ntBASIC1.99□□□□□ -2.09
LHX6Q9UPM6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.99□□□□□ -2.09
LHX6Q9UPM6 RNU6-247P-201ENST00000362636 107 ntBASIC1.98□□□□□ -2.09
LHX6Q9UPM6 SNORD105-201ENST00000386910 85 ntBASIC1.98□□□□□ -2.09
LHX6Q9UPM6 HMGN2P38-201ENST00000423806 265 ntBASIC1.98□□□□□ -2.09
LHX6Q9UPM6 RNA5SP200-201ENST00000516360 103 ntBASIC1.98□□□□□ -2.09
LHX6Q9UPM6 SNORA25.15-201ENST00000516487 89 ntBASIC1.98□□□□□ -2.09
LHX6Q9UPM6 MIR4452-201ENST00000583004 71 ntBASIC1.98□□□□□ -2.09
LHX6Q9UPM6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.98□□□□□ -2.09
LHX6Q9UPM6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LHX6Q9UPM6 MIR516B1-201ENST00000385211 90 ntBASIC1.97□□□□□ -2.09
LHX6Q9UPM6 U7.7-201ENST00000459276 60 ntBASIC1.97□□□□□ -2.09
LHX6Q9UPM6 RNU6-419P-201ENST00000517030 63 ntBASIC1.97□□□□□ -2.09
LHX6Q9UPM6 MIR548AE1-201ENST00000583292 70 ntBASIC1.97□□□□□ -2.09
LHX6Q9UPM6 MIR4448-201ENST00000584360 86 ntBASIC1.97□□□□□ -2.09
LHX6Q9UPM6 RNU6-172P-201ENST00000411000 93 ntBASIC1.96□□□□□ -2.1
LHX6Q9UPM6 AC002429.1-201ENST00000437672 148 ntBASIC1.95□□□□□ -2.1
LHX6Q9UPM6 AC008834.1-201ENST00000511612 175 ntBASIC1.95□□□□□ -2.1
LHX6Q9UPM6 MIR6828-201ENST00000636181 60 ntBASIC1.95□□□□□ -2.1
LHX6Q9UPM6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
LHX6Q9UPM6 Y_RNA.178-201ENST00000363832 102 ntBASIC1.94□□□□□ -2.1
LHX6Q9UPM6 MIR519A2-201ENST00000384990 87 ntBASIC1.94□□□□□ -2.1
LHX6Q9UPM6 SNORD89-201ENST00000390981 114 ntBASIC1.94□□□□□ -2.1
LHX6Q9UPM6 RNA5SP233-201ENST00000459153 113 ntBASIC1.94□□□□□ -2.1
LHX6Q9UPM6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LHX6Q9UPM6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LHX6Q9UPM6 SNORD1B-201ENST00000363091 84 ntBASIC1.93□□□□□ -2.1
LHX6Q9UPM6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.93□□□□□ -2.1
LHX6Q9UPM6 AC104435.1-201ENST00000483483 166 ntBASIC1.93□□□□□ -2.1
LHX6Q9UPM6 MIR4490-201ENST00000582647 84 ntBASIC1.93□□□□□ -2.1
LHX6Q9UPM6 MIR4473-201ENST00000583731 91 ntBASIC1.93□□□□□ -2.1
LHX6Q9UPM6 AC243829.6-201ENST00000612652 106 ntBASIC1.93□□□□□ -2.1
LHX6Q9UPM6 AC243829.3-201ENST00000622177 108 ntBASIC1.93□□□□□ -2.1
LHX6Q9UPM6 AC090617.8-201ENST00000623339 167 ntBASIC1.93□□□□□ -2.1
LHX6Q9UPM6 SNORA48.3-201ENST00000391081 134 ntBASIC1.92□□□□□ -2.1
LHX6Q9UPM6 SNORD110-201ENST00000408189 75 ntBASIC1.92□□□□□ -2.1
LHX6Q9UPM6 MIR1255B2-201ENST00000408618 67 ntBASIC1.92□□□□□ -2.1
LHX6Q9UPM6 AC006210.1-201ENST00000424882 111 ntBASIC1.92□□□□□ -2.1
LHX6Q9UPM6 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
LHX6Q9UPM6 RNU4-52P-201ENST00000384209 138 ntBASIC1.91□□□□□ -2.1
LHX6Q9UPM6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.91□□□□□ -2.1
LHX6Q9UPM6 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
LHX6Q9UPM6 RNU6-1250P-201ENST00000391218 107 ntBASIC1.9□□□□□ -2.11
LHX6Q9UPM6 AL356379.1-201ENST00000414105 126 ntBASIC1.9□□□□□ -2.11
LHX6Q9UPM6 FABP5P4-201ENST00000437203 171 ntBASIC1.9□□□□□ -2.11
LHX6Q9UPM6 RNU6-717P-201ENST00000459076 104 ntBASIC1.9□□□□□ -2.11
LHX6Q9UPM6 MIR3612-201ENST00000579753 87 ntBASIC1.9□□□□□ -2.11
LHX6Q9UPM6 MIR6515-201ENST00000619843 57 ntBASIC1.9□□□□□ -2.11
LHX6Q9UPM6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
LHX6Q9UPM6 RNU6-392P-201ENST00000364926 101 ntBASIC1.89□□□□□ -2.11
LHX6Q9UPM6 MIR573-201ENST00000384964 99 ntBASIC1.89□□□□□ -2.11
LHX6Q9UPM6 MIR222-201ENST00000384992 110 ntBASIC1.89□□□□□ -2.11
LHX6Q9UPM6 MIR4303-201ENST00000581299 66 ntBASIC1.89□□□□□ -2.11
LHX6Q9UPM6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
LHX6Q9UPM6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LHX6Q9UPM6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LHX6Q9UPM6 MIR429-201ENST00000362106 83 ntBASIC1.88□□□□□ -2.11
LHX6Q9UPM6 SNORA67.5-201ENST00000391036 107 ntBASIC1.88□□□□□ -2.11
LHX6Q9UPM6 RNU7-95P-201ENST00000459222 64 ntBASIC1.88□□□□□ -2.11
LHX6Q9UPM6 RNA5SP227-201ENST00000516184 113 ntBASIC1.88□□□□□ -2.11
LHX6Q9UPM6 AC012493.3-201ENST00000604494 112 ntBASIC1.88□□□□□ -2.11
LHX6Q9UPM6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
LHX6Q9UPM6 RNA5SP37-201ENST00000365420 130 ntBASIC1.87□□□□□ -2.11
LHX6Q9UPM6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.87□□□□□ -2.11
LHX6Q9UPM6 RNU7-154P-201ENST00000516194 62 ntBASIC1.86□□□□□ -2.11
LHX6Q9UPM6 MIR5002-201ENST00000584713 97 ntBASIC1.86□□□□□ -2.11
LHX6Q9UPM6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
LHX6Q9UPM6 Y_RNA.109-201ENST00000363215 102 ntBASIC1.85□□□□□ -2.11
LHX6Q9UPM6 RNA5SP160-201ENST00000364866 120 ntBASIC1.85□□□□□ -2.11
LHX6Q9UPM6 AC084768.2-201ENST00000622736 221 ntBASIC1.85□□□□□ -2.11
LHX6Q9UPM6 AC244090.1-201ENST00000441884 93 ntBASIC1.84□□□□□ -2.11
LHX6Q9UPM6 AL096840.1-201ENST00000603287 93 ntBASIC1.84□□□□□ -2.11
LHX6Q9UPM6 MIR8081-201ENST00000611533 95 ntBASIC1.84□□□□□ -2.11
LHX6Q9UPM6 PVT1_3.1-201ENST00000620853 95 ntBASIC1.84□□□□□ -2.11
LHX6Q9UPM6 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
LHX6Q9UPM6 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.83□□□□□ -2.12
LHX6Q9UPM6 RNA5SP102-201ENST00000516865 106 ntBASIC1.83□□□□□ -2.12
LHX6Q9UPM6 MIR548AG1-201ENST00000579932 66 ntBASIC1.83□□□□□ -2.12
LHX6Q9UPM6 AC022709.1-201ENST00000615967 87 ntBASIC1.83□□□□□ -2.12
LHX6Q9UPM6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
LHX6Q9UPM6 MIR20A-201ENST00000362279 71 ntBASIC1.82□□□□□ -2.12
LHX6Q9UPM6 SNORA25-201ENST00000384384 134 ntBASIC1.82□□□□□ -2.12
LHX6Q9UPM6 MIR676-201ENST00000390702 67 ntBASIC1.82□□□□□ -2.12
LHX6Q9UPM6 RNU6-724P-201ENST00000390958 105 ntBASIC1.82□□□□□ -2.12
LHX6Q9UPM6 SNORD2-201ENST00000459163 69 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms