Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RNA5SP325-201ENST00000363756 130 ntBASIC0.13□□□□□ -2.39
SIX4Q9UIU6 RNU6-154P-201ENST00000384306 106 ntBASIC0.13□□□□□ -2.39
SIX4Q9UIU6 RNU6-1177P-201ENST00000391058 104 ntBASIC0.13□□□□□ -2.39
SIX4Q9UIU6 snoU13.17-201ENST00000458802 104 ntBASIC0.13□□□□□ -2.39
SIX4Q9UIU6 SNORD42B-201ENST00000458893 67 ntBASIC0.13□□□□□ -2.39
SIX4Q9UIU6 RNA5SP170-201ENST00000517150 101 ntBASIC0.13□□□□□ -2.39
SIX4Q9UIU6 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.13□□□□□ -2.39
SIX4Q9UIU6 MIR1273G-201ENST00000577677 100 ntBASIC0.13□□□□□ -2.39
SIX4Q9UIU6 AC023932.2-201ENST00000603176 175 ntBASIC0.13□□□□□ -2.39
SIX4Q9UIU6 AC084368.1-201ENST00000620935 65 ntBASIC0.13□□□□□ -2.39
SIX4Q9UIU6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.13□□□□□ -2.39
SIX4Q9UIU6 MIR330-201ENST00000362196 94 ntBASIC0.12□□□□□ -2.39
SIX4Q9UIU6 Y_RNA.73-201ENST00000362910 113 ntBASIC0.12□□□□□ -2.39
SIX4Q9UIU6 RNA5SP214-201ENST00000363378 118 ntBASIC0.12□□□□□ -2.39
SIX4Q9UIU6 SNORD115-37-201ENST00000363768 82 ntBASIC0.12□□□□□ -2.39
SIX4Q9UIU6 RNU6-294P-201ENST00000364999 102 ntBASIC0.12□□□□□ -2.39
SIX4Q9UIU6 RNU6-652P-201ENST00000365488 107 ntBASIC0.12□□□□□ -2.39
SIX4Q9UIU6 MIR652-201ENST00000385278 98 ntBASIC0.12□□□□□ -2.39
SIX4Q9UIU6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
SIX4Q9UIU6 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
SIX4Q9UIU6 Y_RNA.611-201ENST00000410682 108 ntBASIC0.12□□□□□ -2.39
SIX4Q9UIU6 RNU7-188P-201ENST00000517063 64 ntBASIC0.12□□□□□ -2.39
SIX4Q9UIU6 SCARNA11.2-201ENST00000517183 154 ntBASIC0.12□□□□□ -2.39
SIX4Q9UIU6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.11□□□□□ -2.39
SIX4Q9UIU6 RNU6-161P-201ENST00000363051 106 ntBASIC0.11□□□□□ -2.39
SIX4Q9UIU6 Y_RNA.369-201ENST00000365568 117 ntBASIC0.11□□□□□ -2.39
SIX4Q9UIU6 MIR876-201ENST00000401147 81 ntBASIC0.11□□□□□ -2.39
SIX4Q9UIU6 AC093729.1-201ENST00000513074 128 ntBASIC0.11□□□□□ -2.39
SIX4Q9UIU6 SNORD114-5-201ENST00000362928 70 ntBASIC0.1□□□□□ -2.39
SIX4Q9UIU6 SNORD114-9-201ENST00000364370 72 ntBASIC0.1□□□□□ -2.39
SIX4Q9UIU6 MIR593-201ENST00000384856 100 ntBASIC0.1□□□□□ -2.39
SIX4Q9UIU6 SNORA75.1-201ENST00000391130 148 ntBASIC0.1□□□□□ -2.39
SIX4Q9UIU6 RNU6-495P-201ENST00000362995 107 ntBASIC0.09□□□□□ -2.4
SIX4Q9UIU6 RNU6-824P-201ENST00000363724 104 ntBASIC0.09□□□□□ -2.4
SIX4Q9UIU6 Y_RNA.205-201ENST00000364128 113 ntBASIC0.09□□□□□ -2.4
SIX4Q9UIU6 MIR610-201ENST00000385139 96 ntBASIC0.09□□□□□ -2.4
SIX4Q9UIU6 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
SIX4Q9UIU6 SNORA62.5-201ENST00000516634 120 ntBASIC0.09□□□□□ -2.4
SIX4Q9UIU6 AC140658.3-201ENST00000567603 271 ntBASIC0.09□□□□□ -2.4
SIX4Q9UIU6 RN7SL660P-201ENST00000614852 299 ntBASIC0.09□□□□□ -2.4
SIX4Q9UIU6 MIR6779-201ENST00000617283 64 ntBASIC0.09□□□□□ -2.4
SIX4Q9UIU6 RNY1P1-201ENST00000364372 112 ntBASIC0.08□□□□□ -2.4
SIX4Q9UIU6 MIR145-201ENST00000384967 88 ntBASIC0.08□□□□□ -2.4
SIX4Q9UIU6 SCARNA17.3-201ENST00000516381 125 ntBASIC0.08□□□□□ -2.4
SIX4Q9UIU6 SNORD114-29-201ENST00000364819 70 ntBASIC0.07□□□□□ -2.4
SIX4Q9UIU6 RNU6-382P-201ENST00000365181 106 ntBASIC0.07□□□□□ -2.4
SIX4Q9UIU6 SNORD75.2-201ENST00000408784 58 ntBASIC0.07□□□□□ -2.4
SIX4Q9UIU6 AC097510.1-201ENST00000510945 133 ntBASIC0.07□□□□□ -2.4
SIX4Q9UIU6 RNA5SP330-201ENST00000517096 96 ntBASIC0.07□□□□□ -2.4
SIX4Q9UIU6 IGLL4P-201ENST00000614590 133 ntBASIC0.07□□□□□ -2.4
SIX4Q9UIU6 AC006160.2-201ENST00000637708 154 ntBASIC0.07□□□□□ -2.4
SIX4Q9UIU6 MIR494-201ENST00000349529 81 ntBASIC0.06□□□□□ -2.4
SIX4Q9UIU6 RNU6-208P-201ENST00000362431 107 ntBASIC0.06□□□□□ -2.4
SIX4Q9UIU6 RNA5SP163-201ENST00000410304 99 ntBASIC0.06□□□□□ -2.4
SIX4Q9UIU6 AL450471.1-201ENST00000447509 127 ntBASIC0.06□□□□□ -2.4
SIX4Q9UIU6 RNU6-1108P-201ENST00000516308 104 ntBASIC0.06□□□□□ -2.4
SIX4Q9UIU6 MIR8087-201ENST00000612745 78 ntBASIC0.06□□□□□ -2.4
SIX4Q9UIU6 MIR4773-1-201ENST00000637203 78 ntBASIC0.06□□□□□ -2.4
SIX4Q9UIU6 MIR582-201ENST00000365731 98 ntBASIC0.05□□□□□ -2.4
SIX4Q9UIU6 RNU7-24P-201ENST00000458867 62 ntBASIC0.05□□□□□ -2.4
SIX4Q9UIU6 RNU6-175P-201ENST00000516896 107 ntBASIC0.05□□□□□ -2.4
SIX4Q9UIU6 U6.81-201ENST00000612550 106 ntBASIC0.05□□□□□ -2.4
SIX4Q9UIU6 MIR6514-201ENST00000622549 70 ntBASIC0.05□□□□□ -2.4
SIX4Q9UIU6 RNU6-624P-201ENST00000363411 107 ntBASIC0.04□□□□□ -2.4
SIX4Q9UIU6 SNORD114-4-201ENST00000363962 75 ntBASIC0.04□□□□□ -2.4
SIX4Q9UIU6 SNORD77.2-201ENST00000391045 68 ntBASIC0.04□□□□□ -2.4
SIX4Q9UIU6 MIR892B-201ENST00000401279 77 ntBASIC0.04□□□□□ -2.4
SIX4Q9UIU6 MIR1197-201ENST00000408818 88 ntBASIC0.04□□□□□ -2.4
SIX4Q9UIU6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.04□□□□□ -2.4
SIX4Q9UIU6 MIR5588-201ENST00000581890 63 ntBASIC0.04□□□□□ -2.4
SIX4Q9UIU6 AC006254.2-201ENST00000603259 279 ntBASIC0.04□□□□□ -2.4
SIX4Q9UIU6 MIR2909-201ENST00000617113 69 ntBASIC0.04□□□□□ -2.4
SIX4Q9UIU6 MIR20A-201ENST00000362279 71 ntBASIC0.03□□□□□ -2.4
SIX4Q9UIU6 RNU6-1255P-201ENST00000363434 112 ntBASIC0.03□□□□□ -2.4
SIX4Q9UIU6 MIR548E-201ENST00000408287 88 ntBASIC0.03□□□□□ -2.4
SIX4Q9UIU6 AC022137.1-201ENST00000483735 151 ntBASIC0.03□□□□□ -2.4
SIX4Q9UIU6 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
SIX4Q9UIU6 MIR4743-201ENST00000584576 69 ntBASIC0.03□□□□□ -2.4
SIX4Q9UIU6 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.03□□□□□ -2.4
SIX4Q9UIU6 RNU6-990P-201ENST00000364385 104 ntBASIC0.02□□□□□ -2.41
SIX4Q9UIU6 Y_RNA.371-201ENST00000365591 113 ntBASIC0.02□□□□□ -2.41
SIX4Q9UIU6 RNU6-979P-201ENST00000383896 107 ntBASIC0.02□□□□□ -2.41
SIX4Q9UIU6 MIR106A-201ENST00000384870 81 ntBASIC0.02□□□□□ -2.41
SIX4Q9UIU6 MIR450A2-201ENST00000385022 100 ntBASIC0.02□□□□□ -2.41
SIX4Q9UIU6 AC244090.1-201ENST00000441884 93 ntBASIC0.02□□□□□ -2.41
SIX4Q9UIU6 RNU7-159P-201ENST00000459284 62 ntBASIC0.02□□□□□ -2.41
SIX4Q9UIU6 Y_RNA.43-201ENST00000362670 111 ntBASIC0.01□□□□□ -2.41
SIX4Q9UIU6 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
SIX4Q9UIU6 RNU6-180P-201ENST00000516697 61 ntBASIC0.01□□□□□ -2.41
SIX4Q9UIU6 RNU6-478P-201ENST00000363904 110 ntBASIC0□□□□□ -2.41
SIX4Q9UIU6 RNU6-1036P-201ENST00000383959 104 ntBASIC0□□□□□ -2.41
SIX4Q9UIU6 Y_RNA.426-201ENST00000384068 113 ntBASIC0□□□□□ -2.41
SIX4Q9UIU6 RNU6-929P-201ENST00000384429 107 ntBASIC0□□□□□ -2.41
SIX4Q9UIU6 MIR7-2-201ENST00000384970 110 ntBASIC0□□□□□ -2.41
SIX4Q9UIU6 RNU6-592P-201ENST00000411333 103 ntBASIC0□□□□□ -2.41
SIX4Q9UIU6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0□□□□□ -2.41
SIX4Q9UIU6 RNU7-165P-201ENST00000458864 60 ntBASIC0□□□□□ -2.41
SIX4Q9UIU6 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0□□□□□ -2.41
SIX4Q9UIU6 CR383656.4-201ENST00000546909 122 ntBASIC0□□□□□ -2.41
SIX4Q9UIU6 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 222.7 ms