Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 Y_RNA.374-201ENST00000365606 101 ntBASIC0.08□□□□□ -2.4
LIMA1Q9UHB6 Y_RNA.558-201ENST00000384685 113 ntBASIC0.08□□□□□ -2.4
LIMA1Q9UHB6 MIR4796-201ENST00000580742 81 ntBASIC0.08□□□□□ -2.4
LIMA1Q9UHB6 RNU6-633P-201ENST00000362612 103 ntBASIC0.07□□□□□ -2.4
LIMA1Q9UHB6 Y_RNA.407-201ENST00000383986 113 ntBASIC0.07□□□□□ -2.4
LIMA1Q9UHB6 SNORD42B-201ENST00000458893 67 ntBASIC0.07□□□□□ -2.4
LIMA1Q9UHB6 RNU6-267P-201ENST00000516714 103 ntBASIC0.07□□□□□ -2.4
LIMA1Q9UHB6 SCARNA11.2-201ENST00000517183 154 ntBASIC0.07□□□□□ -2.4
LIMA1Q9UHB6 Y_RNA.68-201ENST00000362881 102 ntBASIC0.06□□□□□ -2.4
LIMA1Q9UHB6 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
LIMA1Q9UHB6 MIR1236-201ENST00000408340 102 ntBASIC0.06□□□□□ -2.4
LIMA1Q9UHB6 RNU6-402P-201ENST00000410678 103 ntBASIC0.06□□□□□ -2.4
LIMA1Q9UHB6 RNU7-188P-201ENST00000517063 64 ntBASIC0.06□□□□□ -2.4
LIMA1Q9UHB6 Y_RNA.220-201ENST00000364244 109 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 RNU6-652P-201ENST00000365488 107 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 RNU6-154P-201ENST00000384306 106 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 MIR593-201ENST00000384856 100 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 MIR145-201ENST00000384967 88 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 MIR652-201ENST00000385278 98 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 snoU13.17-201ENST00000458802 104 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 Y_RNA.681-201ENST00000516445 113 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 RNU6-844P-201ENST00000517175 102 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 RN7SL660P-201ENST00000614852 299 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 AC084368.1-201ENST00000620935 65 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 uc_338.10-201ENST00000621872 182 ntBASIC0.05□□□□□ -2.4
LIMA1Q9UHB6 SNORD116-22-201ENST00000384430 92 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 MIR519C-201ENST00000385053 87 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 SNORA75.1-201ENST00000391130 148 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 RNU6-175P-201ENST00000516896 107 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 RNU6-762P-201ENST00000517107 102 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.04□□□□□ -2.4
LIMA1Q9UHB6 RNU6-495P-201ENST00000362995 107 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 RNU6-675P-201ENST00000384236 104 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 RNU6-1177P-201ENST00000391058 104 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 MTATP6P29-201ENST00000415057 132 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 RNA5SP285-201ENST00000516619 119 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 MIR4743-201ENST00000584576 69 ntBASIC0.03□□□□□ -2.4
LIMA1Q9UHB6 RNY4P30-201ENST00000410216 95 ntBASIC0.02□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.593-201ENST00000410292 98 ntBASIC0.02□□□□□ -2.41
LIMA1Q9UHB6 RNU6-180P-201ENST00000516697 61 ntBASIC0.02□□□□□ -2.41
LIMA1Q9UHB6 MIR4290-201ENST00000583807 95 ntBASIC0.02□□□□□ -2.41
LIMA1Q9UHB6 RNU6-824P-201ENST00000363724 104 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 RNU6-302P-201ENST00000365249 107 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 RNY4P3-201ENST00000365254 95 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 MIR582-201ENST00000365731 98 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 MIR329-2-201ENST00000385029 84 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 RNA5SP163-201ENST00000410304 99 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 SCARNA17.3-201ENST00000516381 125 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 MIR6718-201ENST00000616153 80 ntBASIC0.01□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.17-201ENST00000362433 111 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 RNU6-1298P-201ENST00000362456 101 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 RNU5F-1-201ENST00000362507 117 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 MIR892B-201ENST00000401279 77 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 RNU7-165P-201ENST00000458864 60 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.660-201ENST00000516002 120 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.694-201ENST00000516677 117 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 MIR6514-201ENST00000622549 70 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 MIR548BB-201ENST00000626714 66 ntBASIC0□□□□□ -2.41
LIMA1Q9UHB6 SNORD114-29-201ENST00000364819 70 ntBASIC-0.01□□□□□ -2.41
LIMA1Q9UHB6 SNORA49-201ENST00000386157 136 ntBASIC-0.01□□□□□ -2.41
LIMA1Q9UHB6 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.01□□□□□ -2.41
LIMA1Q9UHB6 SNORD75.2-201ENST00000408784 58 ntBASIC-0.01□□□□□ -2.41
LIMA1Q9UHB6 RNU7-24P-201ENST00000458867 62 ntBASIC-0.01□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 RNU6-382P-201ENST00000365181 106 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 RNU6-929P-201ENST00000384429 107 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 MIR548E-201ENST00000408287 88 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 AC097510.1-201ENST00000510945 133 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 CR383656.4-201ENST00000546909 122 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 AC140658.3-201ENST00000567603 271 ntBASIC-0.02□□□□□ -2.41
LIMA1Q9UHB6 MIR20A-201ENST00000362279 71 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 MIR106A-201ENST00000384870 81 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 RNU7-159P-201ENST00000459284 62 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 SNORA40.17-201ENST00000517256 115 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 MIR5582-201ENST00000579697 68 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 U6.81-201ENST00000612550 106 ntBASIC-0.03□□□□□ -2.41
LIMA1Q9UHB6 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.04□□□□□ -2.42
LIMA1Q9UHB6 RNU6-624P-201ENST00000363411 107 ntBASIC-0.04□□□□□ -2.42
LIMA1Q9UHB6 AC244090.1-201ENST00000441884 93 ntBASIC-0.04□□□□□ -2.42
LIMA1Q9UHB6 AC093729.1-201ENST00000513074 128 ntBASIC-0.04□□□□□ -2.42
LIMA1Q9UHB6 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.04□□□□□ -2.42
LIMA1Q9UHB6 MIR2909-201ENST00000617113 69 ntBASIC-0.04□□□□□ -2.42
LIMA1Q9UHB6 MIR148A-201ENST00000362215 68 ntBASIC-0.05□□□□□ -2.42
LIMA1Q9UHB6 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.05□□□□□ -2.42
LIMA1Q9UHB6 RNU6-990P-201ENST00000364385 104 ntBASIC-0.05□□□□□ -2.42
LIMA1Q9UHB6 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.05□□□□□ -2.42
LIMA1Q9UHB6 AC145423.2-201ENST00000610631 239 ntBASIC-0.05□□□□□ -2.42
LIMA1Q9UHB6 AC006160.2-201ENST00000637708 154 ntBASIC-0.05□□□□□ -2.42
LIMA1Q9UHB6 RNA5SP98-201ENST00000363158 137 ntBASIC-0.06□□□□□ -2.42
LIMA1Q9UHB6 SNORD115-37-201ENST00000363768 82 ntBASIC-0.06□□□□□ -2.42
LIMA1Q9UHB6 SNORD114-4-201ENST00000363962 75 ntBASIC-0.06□□□□□ -2.42
LIMA1Q9UHB6 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 428.9 ms