Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 snoU13.17-201ENST00000458802 104 ntBASIC0.2□□□□□ -2.38
SMARCAL1Q9NZC9 SNORA25.13-201ENST00000516395 103 ntBASIC0.2□□□□□ -2.38
SMARCAL1Q9NZC9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
SMARCAL1Q9NZC9 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
SMARCAL1Q9NZC9 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
SMARCAL1Q9NZC9 RNU6-294P-201ENST00000364999 102 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 SNORA24B-201ENST00000384176 131 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 RNU6-675P-201ENST00000384236 104 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 MIR516B1-201ENST00000385211 90 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 RNU6-762P-201ENST00000517107 102 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 MIR3925-201ENST00000584674 77 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 MIR548BB-201ENST00000626714 66 ntBASIC0.19□□□□□ -2.38
SMARCAL1Q9NZC9 RNY4P3-201ENST00000365254 95 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 RNU6-497P-201ENST00000365316 104 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.369-201ENST00000365568 117 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.437-201ENST00000384113 113 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.611-201ENST00000410682 108 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.681-201ENST00000516445 113 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 uc_338.10-201ENST00000621872 182 ntBASIC0.18□□□□□ -2.38
SMARCAL1Q9NZC9 SNORD115-37-201ENST00000363768 82 ntBASIC0.17□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.407-201ENST00000383986 113 ntBASIC0.17□□□□□ -2.38
SMARCAL1Q9NZC9 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
SMARCAL1Q9NZC9 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.17□□□□□ -2.38
SMARCAL1Q9NZC9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.17□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.68-201ENST00000362881 102 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 Y_RNA.73-201ENST00000362910 113 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 RNU6-1177P-201ENST00000391058 104 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 SNORD42B-201ENST00000458893 67 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 AC093729.1-201ENST00000513074 128 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 IGLL4P-201ENST00000614590 133 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 AC084368.1-201ENST00000620935 65 ntBASIC0.16□□□□□ -2.38
SMARCAL1Q9NZC9 RNU5F-1-201ENST00000362507 117 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 RNA5SP214-201ENST00000363378 118 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 RNY1P1-201ENST00000364372 112 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-652P-201ENST00000365488 107 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-154P-201ENST00000384306 106 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 MIR652-201ENST00000385278 98 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-782P-201ENST00000516852 104 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 SCARNA11.2-201ENST00000517183 154 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 AC104408.1-201ENST00000605241 170 ntBASIC0.15□□□□□ -2.39
SMARCAL1Q9NZC9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.14□□□□□ -2.39
SMARCAL1Q9NZC9 MIR2909-201ENST00000617113 69 ntBASIC0.14□□□□□ -2.39
SMARCAL1Q9NZC9 MIR494-201ENST00000349529 81 ntBASIC0.13□□□□□ -2.39
SMARCAL1Q9NZC9 MIR593-201ENST00000384856 100 ntBASIC0.13□□□□□ -2.39
SMARCAL1Q9NZC9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
SMARCAL1Q9NZC9 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
SMARCAL1Q9NZC9 MIR548H2-201ENST00000408874 88 ntBASIC0.13□□□□□ -2.39
SMARCAL1Q9NZC9 RNU7-188P-201ENST00000517063 64 ntBASIC0.13□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-495P-201ENST00000362995 107 ntBASIC0.12□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-1255P-201ENST00000363434 112 ntBASIC0.12□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-824P-201ENST00000363724 104 ntBASIC0.12□□□□□ -2.39
SMARCAL1Q9NZC9 AC140658.3-201ENST00000567603 271 ntBASIC0.12□□□□□ -2.39
SMARCAL1Q9NZC9 SNORD114-9-201ENST00000364370 72 ntBASIC0.11□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-1108P-201ENST00000516308 104 ntBASIC0.11□□□□□ -2.39
SMARCAL1Q9NZC9 RN7SL660P-201ENST00000614852 299 ntBASIC0.11□□□□□ -2.39
SMARCAL1Q9NZC9 MIR6718-201ENST00000616153 80 ntBASIC0.11□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-161P-201ENST00000363051 106 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-382P-201ENST00000365181 106 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 MIR610-201ENST00000385139 96 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 MIR876-201ENST00000401147 81 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 AL450471.1-201ENST00000447509 127 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 AC097510.1-201ENST00000510945 133 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 MIR4773-1-201ENST00000637203 78 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 AC006160.2-201ENST00000637708 154 ntBASIC0.1□□□□□ -2.39
SMARCAL1Q9NZC9 RNU6-208P-201ENST00000362431 107 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 SNORD114-5-201ENST00000362928 70 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 RNU6-624P-201ENST00000363411 107 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 Y_RNA.371-201ENST00000365591 113 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 MIR145-201ENST00000384967 88 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 MIR450A2-201ENST00000385022 100 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 SNORA75.1-201ENST00000391130 148 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 SNORD75.2-201ENST00000408784 58 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 SCARNA17.3-201ENST00000516381 125 ntBASIC0.09□□□□□ -2.4
SMARCAL1Q9NZC9 Y_RNA.43-201ENST00000362670 111 ntBASIC0.08□□□□□ -2.4
SMARCAL1Q9NZC9 SNORD77.2-201ENST00000391045 68 ntBASIC0.08□□□□□ -2.4
SMARCAL1Q9NZC9 RNA5SP163-201ENST00000410304 99 ntBASIC0.08□□□□□ -2.4
SMARCAL1Q9NZC9 AC022137.1-201ENST00000483735 151 ntBASIC0.08□□□□□ -2.4
SMARCAL1Q9NZC9 MIR5588-201ENST00000581890 63 ntBASIC0.08□□□□□ -2.4
SMARCAL1Q9NZC9 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
SMARCAL1Q9NZC9 SNORD114-4-201ENST00000363962 75 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 SNORD114-29-201ENST00000364819 70 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 RNU6-979P-201ENST00000383896 107 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 RNU7-24P-201ENST00000458867 62 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 RNA5SP285-201ENST00000516619 119 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 RNU6-175P-201ENST00000516896 107 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 AC062037.1-201ENST00000605302 128 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.07□□□□□ -2.4
SMARCAL1Q9NZC9 MIR20A-201ENST00000362279 71 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 Y_RNA.178-201ENST00000363832 102 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 MIR106A-201ENST00000384870 81 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 MIR5190-201ENST00000581537 80 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 AC006254.2-201ENST00000603259 279 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 U6.81-201ENST00000612550 106 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 MIR6514-201ENST00000622549 70 ntBASIC0.06□□□□□ -2.4
SMARCAL1Q9NZC9 RNU6-990P-201ENST00000364385 104 ntBASIC0.05□□□□□ -2.4
SMARCAL1Q9NZC9 SNORD73B-201ENST00000364394 72 ntBASIC0.05□□□□□ -2.4
SMARCAL1Q9NZC9 MIR582-201ENST00000365731 98 ntBASIC0.05□□□□□ -2.4
SMARCAL1Q9NZC9 Y_RNA.433-201ENST00000384089 102 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms