Protein–RNA interactions for Protein: Q9NYG2

ZDHHC3, Palmitoyltransferase ZDHHC3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3Q9NYG2 MIR7974-201ENST00000615835 79 ntBASIC1.28□□□□□ -2.2
ZDHHC3Q9NYG2 RNU6-1162P-201ENST00000384443 104 ntBASIC1.27□□□□□ -2.21
ZDHHC3Q9NYG2 AC021146.9-201ENST00000512503 156 ntBASIC1.27□□□□□ -2.21
ZDHHC3Q9NYG2 AC092634.7-201ENST00000621022 103 ntBASIC1.27□□□□□ -2.21
ZDHHC3Q9NYG2 Y_RNA.338-201ENST00000365320 114 ntBASIC1.26□□□□□ -2.21
ZDHHC3Q9NYG2 Y_RNA.407-201ENST00000383986 113 ntBASIC1.26□□□□□ -2.21
ZDHHC3Q9NYG2 RNA5SP299-201ENST00000391203 116 ntBASIC1.26□□□□□ -2.21
ZDHHC3Q9NYG2 SNORD110-201ENST00000408189 75 ntBASIC1.26□□□□□ -2.21
ZDHHC3Q9NYG2 MIR7107-201ENST00000611489 80 ntBASIC1.26□□□□□ -2.21
ZDHHC3Q9NYG2 Y_RNA.250-201ENST00000364542 110 ntBASIC1.25□□□□□ -2.21
ZDHHC3Q9NYG2 RNU6-1089P-201ENST00000516473 104 ntBASIC1.25□□□□□ -2.21
ZDHHC3Q9NYG2 MIR548V-201ENST00000584165 80 ntBASIC1.25□□□□□ -2.21
ZDHHC3Q9NYG2 RNU6-669P-201ENST00000365575 107 ntBASIC1.24□□□□□ -2.21
ZDHHC3Q9NYG2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.24□□□□□ -2.21
ZDHHC3Q9NYG2 AL603825.1-201ENST00000438481 80 ntBASIC1.24□□□□□ -2.21
ZDHHC3Q9NYG2 AL157398.1-201ENST00000452981 186 ntBASIC1.24□□□□□ -2.21
ZDHHC3Q9NYG2 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
ZDHHC3Q9NYG2 RNA5SP215-201ENST00000363440 122 ntBASIC1.23□□□□□ -2.21
ZDHHC3Q9NYG2 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
ZDHHC3Q9NYG2 MIR633-201ENST00000384821 98 ntBASIC1.23□□□□□ -2.21
ZDHHC3Q9NYG2 MIR652-201ENST00000385278 98 ntBASIC1.23□□□□□ -2.21
ZDHHC3Q9NYG2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
ZDHHC3Q9NYG2 SNORA25.5-201ENST00000363782 126 ntBASIC1.22□□□□□ -2.21
ZDHHC3Q9NYG2 SNORA36.2-201ENST00000384004 127 ntBASIC1.22□□□□□ -2.21
ZDHHC3Q9NYG2 MIR521-2-201ENST00000384818 87 ntBASIC1.22□□□□□ -2.21
ZDHHC3Q9NYG2 SCARNA21.1-201ENST00000515996 128 ntBASIC1.22□□□□□ -2.21
ZDHHC3Q9NYG2 SCARNA17.3-201ENST00000516381 125 ntBASIC1.22□□□□□ -2.21
ZDHHC3Q9NYG2 MIR548AE1-201ENST00000583292 70 ntBASIC1.22□□□□□ -2.21
ZDHHC3Q9NYG2 RNA5SP192-201ENST00000364404 120 ntBASIC1.21□□□□□ -2.22
ZDHHC3Q9NYG2 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
ZDHHC3Q9NYG2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.21□□□□□ -2.22
ZDHHC3Q9NYG2 AL353765.1-201ENST00000605514 183 ntBASIC1.21□□□□□ -2.22
ZDHHC3Q9NYG2 snoU13.31-201ENST00000607291 104 ntBASIC1.21□□□□□ -2.22
ZDHHC3Q9NYG2 MIR4752-201ENST00000579672 72 ntBASIC1.2□□□□□ -2.22
ZDHHC3Q9NYG2 SNORA70.25-201ENST00000612741 95 ntBASIC1.2□□□□□ -2.22
ZDHHC3Q9NYG2 SNORA63.6-201ENST00000364921 119 ntBASIC1.19□□□□□ -2.22
ZDHHC3Q9NYG2 RNU6-302P-201ENST00000365249 107 ntBASIC1.19□□□□□ -2.22
ZDHHC3Q9NYG2 RNY1P8-201ENST00000383970 114 ntBASIC1.19□□□□□ -2.22
ZDHHC3Q9NYG2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.19□□□□□ -2.22
ZDHHC3Q9NYG2 MIR4498-201ENST00000577599 66 ntBASIC1.18□□□□□ -2.22
ZDHHC3Q9NYG2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.18□□□□□ -2.22
ZDHHC3Q9NYG2 SNORA15B-2-201ENST00000384058 135 ntBASIC1.17□□□□□ -2.22
ZDHHC3Q9NYG2 SNORA15B-1-201ENST00000384334 135 ntBASIC1.17□□□□□ -2.22
ZDHHC3Q9NYG2 RNU6-987P-201ENST00000384759 104 ntBASIC1.17□□□□□ -2.22
ZDHHC3Q9NYG2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.17□□□□□ -2.22
ZDHHC3Q9NYG2 RNU6-940P-201ENST00000363433 104 ntBASIC1.16□□□□□ -2.22
ZDHHC3Q9NYG2 SNORA33.1-201ENST00000364957 130 ntBASIC1.16□□□□□ -2.22
ZDHHC3Q9NYG2 MIR466-201ENST00000580653 84 ntBASIC1.16□□□□□ -2.22
ZDHHC3Q9NYG2 uc_338.10-201ENST00000621872 182 ntBASIC1.16□□□□□ -2.22
ZDHHC3Q9NYG2 MIR582-201ENST00000365731 98 ntBASIC1.15□□□□□ -2.23
ZDHHC3Q9NYG2 MIR630-201ENST00000384957 97 ntBASIC1.15□□□□□ -2.23
ZDHHC3Q9NYG2 RNU4-37P-201ENST00000410214 84 ntBASIC1.15□□□□□ -2.23
ZDHHC3Q9NYG2 MIR6078-201ENST00000611069 100 ntBASIC1.15□□□□□ -2.23
ZDHHC3Q9NYG2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.14□□□□□ -2.23
ZDHHC3Q9NYG2 MIR548E-201ENST00000408287 88 ntBASIC1.14□□□□□ -2.23
ZDHHC3Q9NYG2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
ZDHHC3Q9NYG2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
ZDHHC3Q9NYG2 RNU6-1079P-201ENST00000362861 110 ntBASIC1.13□□□□□ -2.23
ZDHHC3Q9NYG2 RNA5SP517-201ENST00000364724 117 ntBASIC1.13□□□□□ -2.23
ZDHHC3Q9NYG2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.13□□□□□ -2.23
ZDHHC3Q9NYG2 AC079150.2-201ENST00000443733 78 ntBASIC1.13□□□□□ -2.23
ZDHHC3Q9NYG2 TRMT112P2-201ENST00000512910 132 ntBASIC1.13□□□□□ -2.23
ZDHHC3Q9NYG2 MIR4661-201ENST00000582720 75 ntBASIC1.13□□□□□ -2.23
ZDHHC3Q9NYG2 SNORA25.18-201ENST00000607153 114 ntBASIC1.13□□□□□ -2.23
ZDHHC3Q9NYG2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
ZDHHC3Q9NYG2 MIR517B-201ENST00000385102 67 ntBASIC1.12□□□□□ -2.23
ZDHHC3Q9NYG2 MIR140-201ENST00000385282 100 ntBASIC1.12□□□□□ -2.23
ZDHHC3Q9NYG2 AC069271.1-201ENST00000445577 156 ntBASIC1.12□□□□□ -2.23
ZDHHC3Q9NYG2 Y_RNA.633-201ENST00000459107 95 ntBASIC1.12□□□□□ -2.23
ZDHHC3Q9NYG2 RNU6-92P-201ENST00000605893 104 ntBASIC1.12□□□□□ -2.23
ZDHHC3Q9NYG2 Y_RNA.125-201ENST00000363371 111 ntBASIC1.11□□□□□ -2.23
ZDHHC3Q9NYG2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.11□□□□□ -2.23
ZDHHC3Q9NYG2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
ZDHHC3Q9NYG2 RNU6-614P-201ENST00000384369 107 ntBASIC1.1□□□□□ -2.23
ZDHHC3Q9NYG2 SNORA75.1-201ENST00000391130 148 ntBASIC1.1□□□□□ -2.23
ZDHHC3Q9NYG2 RNU6-321P-201ENST00000410912 106 ntBASIC1.1□□□□□ -2.23
ZDHHC3Q9NYG2 HMGN2P22-201ENST00000427588 175 ntBASIC1.1□□□□□ -2.23
ZDHHC3Q9NYG2 ACA64.5-201ENST00000516207 127 ntBASIC1.1□□□□□ -2.23
ZDHHC3Q9NYG2 U6.59-201ENST00000615686 107 ntBASIC1.1□□□□□ -2.23
ZDHHC3Q9NYG2 U2.7-201ENST00000619197 100 ntBASIC1.1□□□□□ -2.23
ZDHHC3Q9NYG2 U6.96-201ENST00000636425 70 ntBASIC1.09□□□□□ -2.23
ZDHHC3Q9NYG2 RNU6-392P-201ENST00000364926 101 ntBASIC1.08□□□□□ -2.24
ZDHHC3Q9NYG2 SNORD113-2-201ENST00000391082 72 ntBASIC1.08□□□□□ -2.24
ZDHHC3Q9NYG2 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
ZDHHC3Q9NYG2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.08□□□□□ -2.24
ZDHHC3Q9NYG2 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
ZDHHC3Q9NYG2 RNU6-698P-201ENST00000363523 107 ntBASIC1.06□□□□□ -2.24
ZDHHC3Q9NYG2 RNU6-829P-201ENST00000363700 112 ntBASIC1.06□□□□□ -2.24
ZDHHC3Q9NYG2 RNU6-34P-201ENST00000364874 107 ntBASIC1.06□□□□□ -2.24
ZDHHC3Q9NYG2 AC087343.1-201ENST00000477341 475 ntBASIC1.06□□□□□ -2.24
ZDHHC3Q9NYG2 RNU7-174P-201ENST00000516248 59 ntBASIC1.06□□□□□ -2.24
ZDHHC3Q9NYG2 RNU6-122P-201ENST00000516818 107 ntBASIC1.06□□□□□ -2.24
ZDHHC3Q9NYG2 MIR5706-201ENST00000579841 80 ntBASIC1.06□□□□□ -2.24
ZDHHC3Q9NYG2 RNU1-29P-201ENST00000606574 126 ntBASIC1.06□□□□□ -2.24
ZDHHC3Q9NYG2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
ZDHHC3Q9NYG2 MIR608-201ENST00000384820 100 ntBASIC1.05□□□□□ -2.24
ZDHHC3Q9NYG2 SNORD71-201ENST00000411292 86 ntBASIC1.05□□□□□ -2.24
ZDHHC3Q9NYG2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
ZDHHC3Q9NYG2 MIR20A-201ENST00000362279 71 ntBASIC1.04□□□□□ -2.24
ZDHHC3Q9NYG2 Y_RNA.423-201ENST00000384057 113 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 262 ms