Protein–RNA interactions for Protein: Q9H4Q3

PRDM13, PR domain zinc finger protein 13, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13Q9H4Q3 RNU6-471P-201ENST00000383944 106 ntBASIC0.86□□□□□ -2.27
PRDM13Q9H4Q3 RNU6V-201ENST00000384105 107 ntBASIC0.86□□□□□ -2.27
PRDM13Q9H4Q3 SNORD45A-201ENST00000384512 84 ntBASIC0.86□□□□□ -2.27
PRDM13Q9H4Q3 MIR6509-201ENST00000614603 85 ntBASIC0.86□□□□□ -2.27
PRDM13Q9H4Q3 MIR6828-201ENST00000636181 60 ntBASIC0.86□□□□□ -2.27
PRDM13Q9H4Q3 AC073869.9-201ENST00000641610 120 ntBASIC0.86□□□□□ -2.27
PRDM13Q9H4Q3 SNORD113.1-201ENST00000363280 73 ntBASIC0.85□□□□□ -2.27
PRDM13Q9H4Q3 RNU6-54P-201ENST00000365563 107 ntBASIC0.85□□□□□ -2.27
PRDM13Q9H4Q3 RNU6-110P-201ENST00000384508 104 ntBASIC0.85□□□□□ -2.27
PRDM13Q9H4Q3 RNU1-141P-201ENST00000364623 158 ntBASIC0.84□□□□□ -2.27
PRDM13Q9H4Q3 Y_RNA.443-201ENST00000384135 111 ntBASIC0.84□□□□□ -2.27
PRDM13Q9H4Q3 MIR1265-201ENST00000408444 86 ntBASIC0.84□□□□□ -2.27
PRDM13Q9H4Q3 SNORD99-201ENST00000408612 74 ntBASIC0.84□□□□□ -2.27
PRDM13Q9H4Q3 MTND4LP1-201ENST00000446263 157 ntBASIC0.84□□□□□ -2.27
PRDM13Q9H4Q3 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
PRDM13Q9H4Q3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.84□□□□□ -2.27
PRDM13Q9H4Q3 NAMPTP3-201ENST00000569273 224 ntBASIC0.84□□□□□ -2.27
PRDM13Q9H4Q3 MIR151B-201ENST00000584249 96 ntBASIC0.84□□□□□ -2.27
PRDM13Q9H4Q3 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
PRDM13Q9H4Q3 AC069503.3-201ENST00000618674 145 ntBASIC0.84□□□□□ -2.27
PRDM13Q9H4Q3 AL162376.1-201ENST00000624117 175 ntBASIC0.84□□□□□ -2.27
PRDM13Q9H4Q3 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
PRDM13Q9H4Q3 MIR18A-201ENST00000362310 71 ntBASIC0.83□□□□□ -2.28
PRDM13Q9H4Q3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.83□□□□□ -2.28
PRDM13Q9H4Q3 RNU6-716P-201ENST00000365621 103 ntBASIC0.83□□□□□ -2.28
PRDM13Q9H4Q3 RNU6-630P-201ENST00000391258 106 ntBASIC0.83□□□□□ -2.28
PRDM13Q9H4Q3 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
PRDM13Q9H4Q3 AC005520.4-201ENST00000604337 90 ntBASIC0.83□□□□□ -2.28
PRDM13Q9H4Q3 SNORD114-21-201ENST00000606412 72 ntBASIC0.83□□□□□ -2.28
PRDM13Q9H4Q3 MIR6788-201ENST00000618842 66 ntBASIC0.83□□□□□ -2.28
PRDM13Q9H4Q3 SNORA2.1-201ENST00000363089 137 ntBASIC0.82□□□□□ -2.28
PRDM13Q9H4Q3 Y_RNA.250-201ENST00000364542 110 ntBASIC0.82□□□□□ -2.28
PRDM13Q9H4Q3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.82□□□□□ -2.28
PRDM13Q9H4Q3 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
PRDM13Q9H4Q3 RNA5SP227-201ENST00000516184 113 ntBASIC0.82□□□□□ -2.28
PRDM13Q9H4Q3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.82□□□□□ -2.28
PRDM13Q9H4Q3 AC022709.1-201ENST00000615967 87 ntBASIC0.82□□□□□ -2.28
PRDM13Q9H4Q3 RNU4-38P-201ENST00000364472 129 ntBASIC0.81□□□□□ -2.28
PRDM13Q9H4Q3 RNU6-260P-201ENST00000384092 107 ntBASIC0.81□□□□□ -2.28
PRDM13Q9H4Q3 RNU6-269P-201ENST00000391077 97 ntBASIC0.81□□□□□ -2.28
PRDM13Q9H4Q3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.81□□□□□ -2.28
PRDM13Q9H4Q3 AC011195.1-201ENST00000578177 177 ntBASIC0.81□□□□□ -2.28
PRDM13Q9H4Q3 MIR3657-201ENST00000584818 117 ntBASIC0.81□□□□□ -2.28
PRDM13Q9H4Q3 AC103706.3-201ENST00000636297 85 ntBASIC0.81□□□□□ -2.28
PRDM13Q9H4Q3 MIR548J-201ENST00000408833 112 ntBASIC0.8□□□□□ -2.28
PRDM13Q9H4Q3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.8□□□□□ -2.28
PRDM13Q9H4Q3 MIR6515-201ENST00000619843 57 ntBASIC0.8□□□□□ -2.28
PRDM13Q9H4Q3 SNORD116-24-201ENST00000384549 92 ntBASIC0.79□□□□□ -2.28
PRDM13Q9H4Q3 SNORD42B-201ENST00000458893 67 ntBASIC0.79□□□□□ -2.28
PRDM13Q9H4Q3 RNA5SP94-201ENST00000516917 108 ntBASIC0.79□□□□□ -2.28
PRDM13Q9H4Q3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
PRDM13Q9H4Q3 RNA5SP484-201ENST00000458857 111 ntBASIC0.78□□□□□ -2.28
PRDM13Q9H4Q3 RNA5SP268-201ENST00000516828 124 ntBASIC0.78□□□□□ -2.28
PRDM13Q9H4Q3 MIR4511-201ENST00000582784 87 ntBASIC0.78□□□□□ -2.28
PRDM13Q9H4Q3 RNU6-668P-201ENST00000364180 107 ntBASIC0.77□□□□□ -2.29
PRDM13Q9H4Q3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.77□□□□□ -2.29
PRDM13Q9H4Q3 MIR203A-201ENST00000384836 110 ntBASIC0.77□□□□□ -2.29
PRDM13Q9H4Q3 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
PRDM13Q9H4Q3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
PRDM13Q9H4Q3 SNORA36.1-201ENST00000363424 132 ntBASIC0.76□□□□□ -2.29
PRDM13Q9H4Q3 AC006210.1-201ENST00000424882 111 ntBASIC0.76□□□□□ -2.29
PRDM13Q9H4Q3 AC018659.1-201ENST00000551083 169 ntBASIC0.76□□□□□ -2.29
PRDM13Q9H4Q3 RNU6-645P-201ENST00000364649 106 ntBASIC0.75□□□□□ -2.29
PRDM13Q9H4Q3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.75□□□□□ -2.29
PRDM13Q9H4Q3 RNA5SP222-201ENST00000411039 105 ntBASIC0.75□□□□□ -2.29
PRDM13Q9H4Q3 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
PRDM13Q9H4Q3 MIR7107-201ENST00000611489 80 ntBASIC0.75□□□□□ -2.29
PRDM13Q9H4Q3 MIR6739-201ENST00000622461 75 ntBASIC0.75□□□□□ -2.29
PRDM13Q9H4Q3 RNU6-982P-201ENST00000516216 102 ntBASIC0.74□□□□□ -2.29
PRDM13Q9H4Q3 RNU5B-6P-201ENST00000516765 68 ntBASIC0.74□□□□□ -2.29
PRDM13Q9H4Q3 RNA5SP480-201ENST00000516840 109 ntBASIC0.74□□□□□ -2.29
PRDM13Q9H4Q3 RNU6-669P-201ENST00000365575 107 ntBASIC0.73□□□□□ -2.29
PRDM13Q9H4Q3 MIR598-201ENST00000384868 97 ntBASIC0.73□□□□□ -2.29
PRDM13Q9H4Q3 SNORD110-201ENST00000408189 75 ntBASIC0.73□□□□□ -2.29
PRDM13Q9H4Q3 RNA5SP436-201ENST00000516020 115 ntBASIC0.73□□□□□ -2.29
PRDM13Q9H4Q3 RNU6-542P-201ENST00000516405 103 ntBASIC0.73□□□□□ -2.29
PRDM13Q9H4Q3 CYP3A137P-201ENST00000562436 69 ntBASIC0.73□□□□□ -2.29
PRDM13Q9H4Q3 MIR5706-201ENST00000579841 80 ntBASIC0.73□□□□□ -2.29
PRDM13Q9H4Q3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.73□□□□□ -2.29
PRDM13Q9H4Q3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.73□□□□□ -2.29
PRDM13Q9H4Q3 RNA5SP215-201ENST00000363440 122 ntBASIC0.72□□□□□ -2.29
PRDM13Q9H4Q3 Y_RNA.375-201ENST00000365625 101 ntBASIC0.72□□□□□ -2.29
PRDM13Q9H4Q3 RNU6-1162P-201ENST00000384443 104 ntBASIC0.72□□□□□ -2.29
PRDM13Q9H4Q3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.72□□□□□ -2.29
PRDM13Q9H4Q3 MIR5000-201ENST00000577717 103 ntBASIC0.72□□□□□ -2.29
PRDM13Q9H4Q3 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
PRDM13Q9H4Q3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
PRDM13Q9H4Q3 RNU6-990P-201ENST00000364385 104 ntBASIC0.71□□□□□ -2.3
PRDM13Q9H4Q3 SNORA36.2-201ENST00000384004 127 ntBASIC0.71□□□□□ -2.3
PRDM13Q9H4Q3 SNORA15B-2-201ENST00000384058 135 ntBASIC0.71□□□□□ -2.3
PRDM13Q9H4Q3 SNORA15B-1-201ENST00000384334 135 ntBASIC0.71□□□□□ -2.3
PRDM13Q9H4Q3 MIR140-201ENST00000385282 100 ntBASIC0.71□□□□□ -2.3
PRDM13Q9H4Q3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
PRDM13Q9H4Q3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.71□□□□□ -2.3
PRDM13Q9H4Q3 SNORA40.17-201ENST00000517256 115 ntBASIC0.71□□□□□ -2.3
PRDM13Q9H4Q3 MIR521-2-201ENST00000384818 87 ntBASIC0.7□□□□□ -2.3
PRDM13Q9H4Q3 AC021146.9-201ENST00000512503 156 ntBASIC0.7□□□□□ -2.3
PRDM13Q9H4Q3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
PRDM13Q9H4Q3 SNORA63.6-201ENST00000364921 119 ntBASIC0.69□□□□□ -2.3
PRDM13Q9H4Q3 RNU6-302P-201ENST00000365249 107 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms