Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1□□□□□ -2.25
RNF38Q9H0F5 RNU7-24P-201ENST00000458867 62 ntBASIC1□□□□□ -2.25
RNF38Q9H0F5 MIR8053-201ENST00000613344 75 ntBASIC1□□□□□ -2.25
RNF38Q9H0F5 U6.111-201ENST00000636093 83 ntBASIC1□□□□□ -2.25
RNF38Q9H0F5 SNORA36.1-201ENST00000363424 132 ntBASIC0.99□□□□□ -2.25
RNF38Q9H0F5 RNY1P8-201ENST00000383970 114 ntBASIC0.99□□□□□ -2.25
RNF38Q9H0F5 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.99□□□□□ -2.25
RNF38Q9H0F5 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
RNF38Q9H0F5 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
RNF38Q9H0F5 SNORD113.1-201ENST00000363280 73 ntBASIC0.98□□□□□ -2.25
RNF38Q9H0F5 Y_RNA.340-201ENST00000365330 92 ntBASIC0.98□□□□□ -2.25
RNF38Q9H0F5 MIR532-201ENST00000385025 91 ntBASIC0.98□□□□□ -2.25
RNF38Q9H0F5 RNA5SP268-201ENST00000516828 124 ntBASIC0.98□□□□□ -2.25
RNF38Q9H0F5 RNA5SP94-201ENST00000516917 108 ntBASIC0.98□□□□□ -2.25
RNF38Q9H0F5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
RNF38Q9H0F5 RNU6-990P-201ENST00000364385 104 ntBASIC0.97□□□□□ -2.25
RNF38Q9H0F5 SNORA36.2-201ENST00000384004 127 ntBASIC0.97□□□□□ -2.25
RNF38Q9H0F5 RNU6-800P-201ENST00000384473 103 ntBASIC0.97□□□□□ -2.25
RNF38Q9H0F5 MIR548J-201ENST00000408833 112 ntBASIC0.97□□□□□ -2.25
RNF38Q9H0F5 RNU6-982P-201ENST00000516216 102 ntBASIC0.97□□□□□ -2.25
RNF38Q9H0F5 RNA5SP147-201ENST00000516493 109 ntBASIC0.97□□□□□ -2.25
RNF38Q9H0F5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
RNF38Q9H0F5 SNORA8.2-201ENST00000384372 139 ntBASIC0.96□□□□□ -2.26
RNF38Q9H0F5 MIR489-201ENST00000384923 84 ntBASIC0.96□□□□□ -2.26
RNF38Q9H0F5 AC125388.1-201ENST00000459631 156 ntBASIC0.96□□□□□ -2.26
RNF38Q9H0F5 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
RNF38Q9H0F5 MIR3657-201ENST00000584818 117 ntBASIC0.96□□□□□ -2.26
RNF38Q9H0F5 MIR6788-201ENST00000618842 66 ntBASIC0.96□□□□□ -2.26
RNF38Q9H0F5 AL162376.1-201ENST00000624117 175 ntBASIC0.96□□□□□ -2.26
RNF38Q9H0F5 MIR6828-201ENST00000636181 60 ntBASIC0.96□□□□□ -2.26
RNF38Q9H0F5 Y_RNA.386-201ENST00000383913 105 ntBASIC0.95□□□□□ -2.26
RNF38Q9H0F5 RNU6-630P-201ENST00000391258 106 ntBASIC0.95□□□□□ -2.26
RNF38Q9H0F5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.95□□□□□ -2.26
RNF38Q9H0F5 AC018659.1-201ENST00000551083 169 ntBASIC0.95□□□□□ -2.26
RNF38Q9H0F5 MIR4698-201ENST00000577795 80 ntBASIC0.95□□□□□ -2.26
RNF38Q9H0F5 MIR7107-201ENST00000611489 80 ntBASIC0.95□□□□□ -2.26
RNF38Q9H0F5 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
RNF38Q9H0F5 RNU6-1216P-201ENST00000362590 107 ntBASIC0.94□□□□□ -2.26
RNF38Q9H0F5 PSMC1P5-201ENST00000512850 177 ntBASIC0.94□□□□□ -2.26
RNF38Q9H0F5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.94□□□□□ -2.26
RNF38Q9H0F5 RNU6-260P-201ENST00000384092 107 ntBASIC0.93□□□□□ -2.26
RNF38Q9H0F5 AC006210.1-201ENST00000424882 111 ntBASIC0.93□□□□□ -2.26
RNF38Q9H0F5 MIR4752-201ENST00000579672 72 ntBASIC0.93□□□□□ -2.26
RNF38Q9H0F5 MIR4473-201ENST00000583731 91 ntBASIC0.93□□□□□ -2.26
RNF38Q9H0F5 AC005520.4-201ENST00000604337 90 ntBASIC0.93□□□□□ -2.26
RNF38Q9H0F5 MIR6734-201ENST00000621166 68 ntBASIC0.93□□□□□ -2.26
RNF38Q9H0F5 RNU4-45P-201ENST00000365469 141 ntBASIC0.92□□□□□ -2.26
RNF38Q9H0F5 Y_RNA.443-201ENST00000384135 111 ntBASIC0.92□□□□□ -2.26
RNF38Q9H0F5 SNORD116-24-201ENST00000384549 92 ntBASIC0.92□□□□□ -2.26
RNF38Q9H0F5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.92□□□□□ -2.26
RNF38Q9H0F5 RNU6-1223P-201ENST00000517124 104 ntBASIC0.92□□□□□ -2.26
RNF38Q9H0F5 AC022709.1-201ENST00000615967 87 ntBASIC0.92□□□□□ -2.26
RNF38Q9H0F5 AC069503.3-201ENST00000618674 145 ntBASIC0.92□□□□□ -2.26
RNF38Q9H0F5 AL109933.3-201ENST00000619095 188 ntBASIC0.92□□□□□ -2.26
RNF38Q9H0F5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.91□□□□□ -2.26
RNF38Q9H0F5 MIR151B-201ENST00000584249 96 ntBASIC0.91□□□□□ -2.26
RNF38Q9H0F5 MIR1265-201ENST00000408444 86 ntBASIC0.9□□□□□ -2.27
RNF38Q9H0F5 snoU13.13-201ENST00000458842 104 ntBASIC0.9□□□□□ -2.27
RNF38Q9H0F5 SNORA70.25-201ENST00000612741 95 ntBASIC0.9□□□□□ -2.27
RNF38Q9H0F5 RNU6-110P-201ENST00000384508 104 ntBASIC0.89□□□□□ -2.27
RNF38Q9H0F5 SNORD110-201ENST00000408189 75 ntBASIC0.89□□□□□ -2.27
RNF38Q9H0F5 SNORA40.17-201ENST00000517256 115 ntBASIC0.89□□□□□ -2.27
RNF38Q9H0F5 CYP3A137P-201ENST00000562436 69 ntBASIC0.89□□□□□ -2.27
RNF38Q9H0F5 SNORA25.18-201ENST00000607153 114 ntBASIC0.89□□□□□ -2.27
RNF38Q9H0F5 AC073869.9-201ENST00000641610 120 ntBASIC0.89□□□□□ -2.27
RNF38Q9H0F5 SNORA25.4-201ENST00000363666 124 ntBASIC0.88□□□□□ -2.27
RNF38Q9H0F5 RNA5SP517-201ENST00000364724 117 ntBASIC0.88□□□□□ -2.27
RNF38Q9H0F5 MIR548AE1-201ENST00000583292 70 ntBASIC0.88□□□□□ -2.27
RNF38Q9H0F5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
RNF38Q9H0F5 SNORA2.1-201ENST00000363089 137 ntBASIC0.87□□□□□ -2.27
RNF38Q9H0F5 RNU6-645P-201ENST00000364649 106 ntBASIC0.87□□□□□ -2.27
RNF38Q9H0F5 MIR7-2-201ENST00000384970 110 ntBASIC0.87□□□□□ -2.27
RNF38Q9H0F5 MIR140-201ENST00000385282 100 ntBASIC0.87□□□□□ -2.27
RNF38Q9H0F5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
RNF38Q9H0F5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
RNF38Q9H0F5 SNORD114-4-201ENST00000363962 75 ntBASIC0.86□□□□□ -2.27
RNF38Q9H0F5 RNU6-668P-201ENST00000364180 107 ntBASIC0.86□□□□□ -2.27
RNF38Q9H0F5 Y_RNA.407-201ENST00000383986 113 ntBASIC0.86□□□□□ -2.27
RNF38Q9H0F5 MIR146A-201ENST00000385201 99 ntBASIC0.86□□□□□ -2.27
RNF38Q9H0F5 AC069271.1-201ENST00000445577 156 ntBASIC0.86□□□□□ -2.27
RNF38Q9H0F5 MTND4LP1-201ENST00000446263 157 ntBASIC0.86□□□□□ -2.27
RNF38Q9H0F5 RNA5SP436-201ENST00000516020 115 ntBASIC0.86□□□□□ -2.27
RNF38Q9H0F5 MIR5000-201ENST00000577717 103 ntBASIC0.86□□□□□ -2.27
RNF38Q9H0F5 Y_RNA.205-201ENST00000364128 113 ntBASIC0.85□□□□□ -2.27
RNF38Q9H0F5 MIR652-201ENST00000385278 98 ntBASIC0.85□□□□□ -2.27
RNF38Q9H0F5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
RNF38Q9H0F5 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
RNF38Q9H0F5 AC092634.7-201ENST00000621022 103 ntBASIC0.85□□□□□ -2.27
RNF38Q9H0F5 Y_RNA.540-201ENST00000384638 111 ntBASIC0.84□□□□□ -2.27
RNF38Q9H0F5 AC021146.9-201ENST00000512503 156 ntBASIC0.83□□□□□ -2.28
RNF38Q9H0F5 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
RNF38Q9H0F5 MIR6515-201ENST00000619843 57 ntBASIC0.83□□□□□ -2.28
RNF38Q9H0F5 MIR582-201ENST00000365731 98 ntBASIC0.81□□□□□ -2.28
RNF38Q9H0F5 RNU6-471P-201ENST00000383944 106 ntBASIC0.81□□□□□ -2.28
RNF38Q9H0F5 MIR9-2-201ENST00000384838 87 ntBASIC0.81□□□□□ -2.28
RNF38Q9H0F5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.81□□□□□ -2.28
RNF38Q9H0F5 SCARNA17.3-201ENST00000516381 125 ntBASIC0.81□□□□□ -2.28
RNF38Q9H0F5 RNU6-656P-201ENST00000516785 107 ntBASIC0.81□□□□□ -2.28
RNF38Q9H0F5 RNU1-29P-201ENST00000606574 126 ntBASIC0.81□□□□□ -2.28
RNF38Q9H0F5 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 266.2 ms