Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
FOXP3Q9BZS1 RNU6-1039P-201ENST00000383931 107 ntBASIC0.98□□□□□ -2.25
FOXP3Q9BZS1 RNA5SP484-201ENST00000458857 111 ntBASIC0.98□□□□□ -2.25
FOXP3Q9BZS1 SNORD42B-201ENST00000458893 67 ntBASIC0.98□□□□□ -2.25
FOXP3Q9BZS1 RNA5SP480-201ENST00000516840 109 ntBASIC0.98□□□□□ -2.25
FOXP3Q9BZS1 RNU6-539P-201ENST00000516665 103 ntBASIC0.97□□□□□ -2.25
FOXP3Q9BZS1 MIR7107-201ENST00000611489 80 ntBASIC0.97□□□□□ -2.25
FOXP3Q9BZS1 MIR8053-201ENST00000613344 75 ntBASIC0.97□□□□□ -2.25
FOXP3Q9BZS1 AC069503.3-201ENST00000618674 145 ntBASIC0.97□□□□□ -2.25
FOXP3Q9BZS1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.97□□□□□ -2.25
FOXP3Q9BZS1 MIR373-201ENST00000362273 69 ntBASIC0.96□□□□□ -2.26
FOXP3Q9BZS1 SNORD45.1-201ENST00000363181 77 ntBASIC0.96□□□□□ -2.26
FOXP3Q9BZS1 SNORD115-31-201ENST00000365318 82 ntBASIC0.96□□□□□ -2.26
FOXP3Q9BZS1 RNA5SP436-201ENST00000516020 115 ntBASIC0.96□□□□□ -2.26
FOXP3Q9BZS1 AC211469.2-201ENST00000605461 205 ntBASIC0.96□□□□□ -2.26
FOXP3Q9BZS1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.96□□□□□ -2.26
FOXP3Q9BZS1 AC073869.9-201ENST00000641610 120 ntBASIC0.96□□□□□ -2.26
FOXP3Q9BZS1 RNU6-540P-201ENST00000384622 101 ntBASIC0.95□□□□□ -2.26
FOXP3Q9BZS1 MIR3973-201ENST00000579824 107 ntBASIC0.95□□□□□ -2.26
FOXP3Q9BZS1 MIR6509-201ENST00000614603 85 ntBASIC0.95□□□□□ -2.26
FOXP3Q9BZS1 SNORD115-22-201ENST00000364456 82 ntBASIC0.94□□□□□ -2.26
FOXP3Q9BZS1 MIR608-201ENST00000384820 100 ntBASIC0.94□□□□□ -2.26
FOXP3Q9BZS1 MIR598-201ENST00000384868 97 ntBASIC0.94□□□□□ -2.26
FOXP3Q9BZS1 RNY1P8-201ENST00000383970 114 ntBASIC0.93□□□□□ -2.26
FOXP3Q9BZS1 RNU6-604P-201ENST00000390917 100 ntBASIC0.93□□□□□ -2.26
FOXP3Q9BZS1 RNU6-788P-201ENST00000390967 104 ntBASIC0.93□□□□□ -2.26
FOXP3Q9BZS1 RNU6-590P-201ENST00000365039 107 ntBASIC0.92□□□□□ -2.26
FOXP3Q9BZS1 MIR140-201ENST00000385282 100 ntBASIC0.92□□□□□ -2.26
FOXP3Q9BZS1 RNU5B-6P-201ENST00000516765 68 ntBASIC0.92□□□□□ -2.26
FOXP3Q9BZS1 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
FOXP3Q9BZS1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
FOXP3Q9BZS1 SNORD114-4-201ENST00000363962 75 ntBASIC0.91□□□□□ -2.26
FOXP3Q9BZS1 SNORA36.2-201ENST00000384004 127 ntBASIC0.91□□□□□ -2.26
FOXP3Q9BZS1 RNU6-649P-201ENST00000384463 107 ntBASIC0.91□□□□□ -2.26
FOXP3Q9BZS1 SNORD45A-201ENST00000384512 84 ntBASIC0.91□□□□□ -2.26
FOXP3Q9BZS1 RNA5SP517-201ENST00000364724 117 ntBASIC0.9□□□□□ -2.27
FOXP3Q9BZS1 RNU6-260P-201ENST00000384092 107 ntBASIC0.9□□□□□ -2.27
FOXP3Q9BZS1 RNU6-110P-201ENST00000384508 104 ntBASIC0.9□□□□□ -2.27
FOXP3Q9BZS1 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
FOXP3Q9BZS1 RNU6-881P-201ENST00000516813 102 ntBASIC0.9□□□□□ -2.27
FOXP3Q9BZS1 AC018659.1-201ENST00000551083 169 ntBASIC0.9□□□□□ -2.27
FOXP3Q9BZS1 MIR3657-201ENST00000584818 117 ntBASIC0.9□□□□□ -2.27
FOXP3Q9BZS1 SNORD114-26-201ENST00000363543 72 ntBASIC0.89□□□□□ -2.27
FOXP3Q9BZS1 MIR203A-201ENST00000384836 110 ntBASIC0.89□□□□□ -2.27
FOXP3Q9BZS1 RNU6-663P-201ENST00000391105 106 ntBASIC0.89□□□□□ -2.27
FOXP3Q9BZS1 SNORD30.1-201ENST00000391309 70 ntBASIC0.89□□□□□ -2.27
FOXP3Q9BZS1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.89□□□□□ -2.27
FOXP3Q9BZS1 AC006210.1-201ENST00000424882 111 ntBASIC0.89□□□□□ -2.27
FOXP3Q9BZS1 CYP3A137P-201ENST00000562436 69 ntBASIC0.89□□□□□ -2.27
FOXP3Q9BZS1 MIR5000-201ENST00000577717 103 ntBASIC0.89□□□□□ -2.27
FOXP3Q9BZS1 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
FOXP3Q9BZS1 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
FOXP3Q9BZS1 SNORD113.1-201ENST00000363280 73 ntBASIC0.88□□□□□ -2.27
FOXP3Q9BZS1 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
FOXP3Q9BZS1 RNU6-895P-201ENST00000384125 103 ntBASIC0.88□□□□□ -2.27
FOXP3Q9BZS1 RNU6-848P-201ENST00000515948 107 ntBASIC0.88□□□□□ -2.27
FOXP3Q9BZS1 RNU6-351P-201ENST00000516097 100 ntBASIC0.88□□□□□ -2.27
FOXP3Q9BZS1 RNU6-617P-201ENST00000516147 107 ntBASIC0.88□□□□□ -2.27
FOXP3Q9BZS1 RNU6-473P-201ENST00000516164 107 ntBASIC0.88□□□□□ -2.27
FOXP3Q9BZS1 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
FOXP3Q9BZS1 RNU6-1049P-201ENST00000516414 107 ntBASIC0.88□□□□□ -2.27
FOXP3Q9BZS1 MIR5706-201ENST00000579841 80 ntBASIC0.88□□□□□ -2.27
FOXP3Q9BZS1 SNORA2.1-201ENST00000363089 137 ntBASIC0.87□□□□□ -2.27
FOXP3Q9BZS1 SNORD110-201ENST00000408189 75 ntBASIC0.87□□□□□ -2.27
FOXP3Q9BZS1 SNORA40.17-201ENST00000517256 115 ntBASIC0.87□□□□□ -2.27
FOXP3Q9BZS1 AC092634.7-201ENST00000621022 103 ntBASIC0.87□□□□□ -2.27
FOXP3Q9BZS1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
FOXP3Q9BZS1 SNORA70.25-201ENST00000612741 95 ntBASIC0.86□□□□□ -2.27
FOXP3Q9BZS1 MIR6779-201ENST00000617283 64 ntBASIC0.86□□□□□ -2.27
FOXP3Q9BZS1 U6.111-201ENST00000636093 83 ntBASIC0.86□□□□□ -2.27
FOXP3Q9BZS1 SNORD118-201ENST00000363593 134 ntBASIC0.85□□□□□ -2.27
FOXP3Q9BZS1 RNU6-990P-201ENST00000364385 104 ntBASIC0.85□□□□□ -2.27
FOXP3Q9BZS1 Y_RNA.250-201ENST00000364542 110 ntBASIC0.85□□□□□ -2.27
FOXP3Q9BZS1 Y_RNA.407-201ENST00000383986 113 ntBASIC0.85□□□□□ -2.27
FOXP3Q9BZS1 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
FOXP3Q9BZS1 RNU1-29P-201ENST00000606574 126 ntBASIC0.85□□□□□ -2.27
FOXP3Q9BZS1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.85□□□□□ -2.27
FOXP3Q9BZS1 SNORA40.8-201ENST00000411034 126 ntBASIC0.84□□□□□ -2.27
FOXP3Q9BZS1 MIR4752-201ENST00000579672 72 ntBASIC0.84□□□□□ -2.27
FOXP3Q9BZS1 SNORA25.18-201ENST00000607153 114 ntBASIC0.84□□□□□ -2.27
FOXP3Q9BZS1 RNU6-1216P-201ENST00000362590 107 ntBASIC0.83□□□□□ -2.28
FOXP3Q9BZS1 Y_RNA.386-201ENST00000383913 105 ntBASIC0.83□□□□□ -2.28
FOXP3Q9BZS1 SNORD116-24-201ENST00000384549 92 ntBASIC0.83□□□□□ -2.28
FOXP3Q9BZS1 AC069271.1-201ENST00000445577 156 ntBASIC0.83□□□□□ -2.28
FOXP3Q9BZS1 RNU6-982P-201ENST00000516216 102 ntBASIC0.82□□□□□ -2.28
FOXP3Q9BZS1 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
FOXP3Q9BZS1 MIR548AE1-201ENST00000583292 70 ntBASIC0.82□□□□□ -2.28
FOXP3Q9BZS1 MIR4473-201ENST00000583731 91 ntBASIC0.82□□□□□ -2.28
FOXP3Q9BZS1 RNU6-800P-201ENST00000384473 103 ntBASIC0.81□□□□□ -2.28
FOXP3Q9BZS1 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
FOXP3Q9BZS1 SCARNA17.3-201ENST00000516381 125 ntBASIC0.81□□□□□ -2.28
FOXP3Q9BZS1 AL590095.2-201ENST00000604136 117 ntBASIC0.81□□□□□ -2.28
FOXP3Q9BZS1 RNA5SP325-201ENST00000363756 130 ntBASIC0.8□□□□□ -2.28
FOXP3Q9BZS1 MIR652-201ENST00000385278 98 ntBASIC0.8□□□□□ -2.28
FOXP3Q9BZS1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
FOXP3Q9BZS1 Y_RNA.443-201ENST00000384135 111 ntBASIC0.79□□□□□ -2.28
FOXP3Q9BZS1 MIR518A1-201ENST00000385068 85 ntBASIC0.79□□□□□ -2.28
FOXP3Q9BZS1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
FOXP3Q9BZS1 RNU6-630P-201ENST00000391258 106 ntBASIC0.79□□□□□ -2.28
FOXP3Q9BZS1 SNORD71-201ENST00000411292 86 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 810 ms