Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.04□□□□□ -2.42
RSPO3Q9BXY4 SNORA24B-201ENST00000384176 131 ntBASIC-0.04□□□□□ -2.42
RSPO3Q9BXY4 RNU6-154P-201ENST00000384306 106 ntBASIC-0.04□□□□□ -2.42
RSPO3Q9BXY4 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.04□□□□□ -2.42
RSPO3Q9BXY4 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.04□□□□□ -2.42
RSPO3Q9BXY4 snoU13.19-201ENST00000459148 104 ntBASIC-0.04□□□□□ -2.42
RSPO3Q9BXY4 RNU6-919P-201ENST00000516731 104 ntBASIC-0.04□□□□□ -2.42
RSPO3Q9BXY4 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.04□□□□□ -2.42
RSPO3Q9BXY4 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.04□□□□□ -2.42
RSPO3Q9BXY4 MIR4743-201ENST00000584576 69 ntBASIC-0.04□□□□□ -2.42
RSPO3Q9BXY4 AP001318.4-201ENST00000616637 121 ntBASIC-0.04□□□□□ -2.42
RSPO3Q9BXY4 RNU4-32P-201ENST00000363404 141 ntBASIC-0.05□□□□□ -2.42
RSPO3Q9BXY4 RNU6-147P-201ENST00000383983 107 ntBASIC-0.05□□□□□ -2.42
RSPO3Q9BXY4 RNU6-811P-201ENST00000384069 107 ntBASIC-0.05□□□□□ -2.42
RSPO3Q9BXY4 U3.27-201ENST00000391237 200 ntBASIC-0.05□□□□□ -2.42
RSPO3Q9BXY4 AL035461.1-201ENST00000421490 332 ntBASIC-0.05□□□□□ -2.42
RSPO3Q9BXY4 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.05□□□□□ -2.42
RSPO3Q9BXY4 SNORA18.5-201ENST00000516616 101 ntBASIC-0.05□□□□□ -2.42
RSPO3Q9BXY4 RNU6-762P-201ENST00000517107 102 ntBASIC-0.05□□□□□ -2.42
RSPO3Q9BXY4 MIR6514-201ENST00000622549 70 ntBASIC-0.05□□□□□ -2.42
RSPO3Q9BXY4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.05□□□□□ -2.42
RSPO3Q9BXY4 SNORD116-10-201ENST00000363791 102 ntBASIC-0.06□□□□□ -2.42
RSPO3Q9BXY4 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.06□□□□□ -2.42
RSPO3Q9BXY4 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.06□□□□□ -2.42
RSPO3Q9BXY4 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.06□□□□□ -2.42
RSPO3Q9BXY4 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
RSPO3Q9BXY4 SNORA75.1-201ENST00000391130 148 ntBASIC-0.06□□□□□ -2.42
RSPO3Q9BXY4 MIR892B-201ENST00000401279 77 ntBASIC-0.06□□□□□ -2.42
RSPO3Q9BXY4 snoU13.17-201ENST00000458802 104 ntBASIC-0.06□□□□□ -2.42
RSPO3Q9BXY4 RNU6-158P-201ENST00000517104 100 ntBASIC-0.06□□□□□ -2.42
RSPO3Q9BXY4 SNORA63.2-201ENST00000362603 126 ntBASIC-0.07□□□□□ -2.42
RSPO3Q9BXY4 SNORD115-27-201ENST00000364430 82 ntBASIC-0.07□□□□□ -2.42
RSPO3Q9BXY4 MIR548U-201ENST00000390728 81 ntBASIC-0.07□□□□□ -2.42
RSPO3Q9BXY4 RNU7-159P-201ENST00000459284 62 ntBASIC-0.07□□□□□ -2.42
RSPO3Q9BXY4 RNU7-153P-201ENST00000516455 62 ntBASIC-0.07□□□□□ -2.42
RSPO3Q9BXY4 MIR548AI-201ENST00000579940 88 ntBASIC-0.07□□□□□ -2.42
RSPO3Q9BXY4 MIR6507-201ENST00000613630 70 ntBASIC-0.07□□□□□ -2.42
RSPO3Q9BXY4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.07□□□□□ -2.42
RSPO3Q9BXY4 SNORD114-31-201ENST00000363219 75 ntBASIC-0.08□□□□□ -2.42
RSPO3Q9BXY4 RNU6-640P-201ENST00000363693 105 ntBASIC-0.08□□□□□ -2.42
RSPO3Q9BXY4 SNORD114-15-201ENST00000364687 72 ntBASIC-0.08□□□□□ -2.42
RSPO3Q9BXY4 MIR582-201ENST00000365731 98 ntBASIC-0.08□□□□□ -2.42
RSPO3Q9BXY4 MIR488-201ENST00000365739 83 ntBASIC-0.08□□□□□ -2.42
RSPO3Q9BXY4 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.08□□□□□ -2.42
RSPO3Q9BXY4 RNU6-758P-201ENST00000516292 89 ntBASIC-0.08□□□□□ -2.42
RSPO3Q9BXY4 CR383656.4-201ENST00000546909 122 ntBASIC-0.08□□□□□ -2.42
RSPO3Q9BXY4 MIR655-201ENST00000362159 97 ntBASIC-0.09□□□□□ -2.42
RSPO3Q9BXY4 RNU6-495P-201ENST00000362995 107 ntBASIC-0.09□□□□□ -2.42
RSPO3Q9BXY4 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.09□□□□□ -2.42
RSPO3Q9BXY4 SNORD114-29-201ENST00000364819 70 ntBASIC-0.09□□□□□ -2.42
RSPO3Q9BXY4 RNU6-905P-201ENST00000384434 107 ntBASIC-0.09□□□□□ -2.42
RSPO3Q9BXY4 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.09□□□□□ -2.42
RSPO3Q9BXY4 SNORA49-201ENST00000386157 136 ntBASIC-0.09□□□□□ -2.42
RSPO3Q9BXY4 MIR216B-201ENST00000390186 82 ntBASIC-0.09□□□□□ -2.42
RSPO3Q9BXY4 AC097510.1-201ENST00000510945 133 ntBASIC-0.09□□□□□ -2.42
RSPO3Q9BXY4 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.43
RSPO3Q9BXY4 SNORA40.13-201ENST00000516379 120 ntBASIC-0.1□□□□□ -2.43
RSPO3Q9BXY4 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.1□□□□□ -2.43
RSPO3Q9BXY4 MIR4802-201ENST00000581881 80 ntBASIC-0.1□□□□□ -2.43
RSPO3Q9BXY4 AC145423.2-201ENST00000610631 239 ntBASIC-0.1□□□□□ -2.43
RSPO3Q9BXY4 MALAT1.1-201ENST00000618249 95 ntBASIC-0.1□□□□□ -2.43
RSPO3Q9BXY4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.1□□□□□ -2.43
RSPO3Q9BXY4 MIR20A-201ENST00000362279 71 ntBASIC-0.11□□□□□ -2.43
RSPO3Q9BXY4 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.11□□□□□ -2.43
RSPO3Q9BXY4 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.11□□□□□ -2.43
RSPO3Q9BXY4 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.11□□□□□ -2.43
RSPO3Q9BXY4 AC244250.2-201ENST00000418731 148 ntBASIC-0.11□□□□□ -2.43
RSPO3Q9BXY4 MIR148A-201ENST00000362215 68 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 RNU6-824P-201ENST00000363724 104 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 RNU6-32P-201ENST00000383948 107 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 RNU6-13P-201ENST00000384248 107 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 RNU6-12P-201ENST00000384604 107 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 RNU6-41P-201ENST00000384741 107 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 RNY1P7-201ENST00000384743 110 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 MIR548E-201ENST00000408287 88 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 AC244090.1-201ENST00000441884 93 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 RNU6-267P-201ENST00000516714 103 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 SNORA40.17-201ENST00000517256 115 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 MIR4796-201ENST00000580742 81 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 MIR4645-201ENST00000583158 77 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 MIR2052-201ENST00000636055 55 ntBASIC-0.12□□□□□ -2.43
RSPO3Q9BXY4 RNU6-990P-201ENST00000364385 104 ntBASIC-0.13□□□□□ -2.43
RSPO3Q9BXY4 RNU6-382P-201ENST00000365181 106 ntBASIC-0.13□□□□□ -2.43
RSPO3Q9BXY4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
RSPO3Q9BXY4 MIR1236-201ENST00000408340 102 ntBASIC-0.13□□□□□ -2.43
RSPO3Q9BXY4 MIR4668-201ENST00000582284 70 ntBASIC-0.13□□□□□ -2.43
RSPO3Q9BXY4 RNU6-219P-201ENST00000364728 107 ntBASIC-0.14□□□□□ -2.43
RSPO3Q9BXY4 RNY4P3-201ENST00000365254 95 ntBASIC-0.14□□□□□ -2.43
RSPO3Q9BXY4 RNU6-497P-201ENST00000365316 104 ntBASIC-0.14□□□□□ -2.43
RSPO3Q9BXY4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
RSPO3Q9BXY4 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.14□□□□□ -2.43
RSPO3Q9BXY4 MTATP6P29-201ENST00000415057 132 ntBASIC-0.14□□□□□ -2.43
RSPO3Q9BXY4 RNU7-24P-201ENST00000458867 62 ntBASIC-0.14□□□□□ -2.43
RSPO3Q9BXY4 MIR4493-201ENST00000584016 73 ntBASIC-0.14□□□□□ -2.43
RSPO3Q9BXY4 AP001180.6-201ENST00000584918 159 ntBASIC-0.14□□□□□ -2.43
RSPO3Q9BXY4 RNU6-633P-201ENST00000362612 103 ntBASIC-0.15□□□□□ -2.43
RSPO3Q9BXY4 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
RSPO3Q9BXY4 SNORD114-12-201ENST00000365400 75 ntBASIC-0.15□□□□□ -2.43
RSPO3Q9BXY4 RNU6-46P-201ENST00000383860 107 ntBASIC-0.15□□□□□ -2.43
RSPO3Q9BXY4 MIR604-201ENST00000384880 94 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 669.8 ms