Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 MIR3140-201ENST00000583685 90 ntBASIC-0.52□□□□□ -2.49
NDNQ99608 MIR6129-201ENST00000616087 109 ntBASIC-0.52□□□□□ -2.49
NDNQ99608 AC132825.6-201ENST00000638861 357 ntBASIC-0.52□□□□□ -2.49
NDNQ99608 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.53□□□□□ -2.49
NDNQ99608 SNORA24B-201ENST00000384176 131 ntBASIC-0.53□□□□□ -2.49
NDNQ99608 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.53□□□□□ -2.49
NDNQ99608 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.53□□□□□ -2.49
NDNQ99608 RNU6-554P-201ENST00000410466 106 ntBASIC-0.53□□□□□ -2.49
NDNQ99608 RNU6-313P-201ENST00000516317 112 ntBASIC-0.53□□□□□ -2.49
NDNQ99608 RNU6-589P-201ENST00000516485 107 ntBASIC-0.53□□□□□ -2.49
NDNQ99608 SNORA18.5-201ENST00000516616 101 ntBASIC-0.53□□□□□ -2.49
NDNQ99608 RNA5SP66-201ENST00000517178 101 ntBASIC-0.53□□□□□ -2.49
NDNQ99608 MIR3910-1-201ENST00000580936 111 ntBASIC-0.53□□□□□ -2.49
NDNQ99608 SNORD114-28-201ENST00000363610 72 ntBASIC-0.54□□□□□ -2.5
NDNQ99608 SNORA49-201ENST00000386157 136 ntBASIC-0.54□□□□□ -2.5
NDNQ99608 RNA5SP292-201ENST00000390974 118 ntBASIC-0.54□□□□□ -2.5
NDNQ99608 RNU7-24P-201ENST00000458867 62 ntBASIC-0.54□□□□□ -2.5
NDNQ99608 SNORA40.17-201ENST00000517256 115 ntBASIC-0.54□□□□□ -2.5
NDNQ99608 MIR4645-201ENST00000583158 77 ntBASIC-0.54□□□□□ -2.5
NDNQ99608 MIR8064-201ENST00000612863 90 ntBASIC-0.54□□□□□ -2.5
NDNQ99608 RNA5SP275-201ENST00000363936 118 ntBASIC-0.55□□□□□ -2.5
NDNQ99608 MIR582-201ENST00000365731 98 ntBASIC-0.55□□□□□ -2.5
NDNQ99608 AC096531.1-201ENST00000419107 107 ntBASIC-0.55□□□□□ -2.5
NDNQ99608 SNORD126-201ENST00000459475 77 ntBASIC-0.56□□□□□ -2.5
NDNQ99608 RNU7-61P-201ENST00000515897 61 ntBASIC-0.56□□□□□ -2.5
NDNQ99608 AC145423.2-201ENST00000610631 239 ntBASIC-0.56□□□□□ -2.5
NDNQ99608 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.57□□□□□ -2.5
NDNQ99608 RNU6-766P-201ENST00000362478 107 ntBASIC-0.57□□□□□ -2.5
NDNQ99608 RNU4-32P-201ENST00000363404 141 ntBASIC-0.57□□□□□ -2.5
NDNQ99608 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.57□□□□□ -2.5
NDNQ99608 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
NDNQ99608 SNORD75.2-201ENST00000408784 58 ntBASIC-0.57□□□□□ -2.5
NDNQ99608 RNU7-55P-201ENST00000459426 62 ntBASIC-0.57□□□□□ -2.5
NDNQ99608 AC026421.1-201ENST00000519101 163 ntBASIC-0.57□□□□□ -2.5
NDNQ99608 RNU6-901P-201ENST00000384593 106 ntBASIC-0.58□□□□□ -2.5
NDNQ99608 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.58□□□□□ -2.5
NDNQ99608 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.58□□□□□ -2.5
NDNQ99608 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.59□□□□□ -2.5
NDNQ99608 SNORA19-201ENST00000384737 128 ntBASIC-0.59□□□□□ -2.5
NDNQ99608 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.59□□□□□ -2.5
NDNQ99608 RNU6-109P-201ENST00000516364 107 ntBASIC-0.59□□□□□ -2.5
NDNQ99608 RNU6-184P-201ENST00000516514 107 ntBASIC-0.59□□□□□ -2.5
NDNQ99608 AC093726.3-201ENST00000637588 150 ntBASIC-0.59□□□□□ -2.5
NDNQ99608 RNU5F-1-201ENST00000362507 117 ntBASIC-0.6□□□□□ -2.51
NDNQ99608 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.6□□□□□ -2.51
NDNQ99608 SNORD113-1-201ENST00000365321 69 ntBASIC-0.6□□□□□ -2.51
NDNQ99608 MIR1236-201ENST00000408340 102 ntBASIC-0.6□□□□□ -2.51
NDNQ99608 RNU6-158P-201ENST00000517104 100 ntBASIC-0.6□□□□□ -2.51
NDNQ99608 AC006254.2-201ENST00000603259 279 ntBASIC-0.6□□□□□ -2.51
NDNQ99608 SNORD114-11-201ENST00000363738 75 ntBASIC-0.61□□□□□ -2.51
NDNQ99608 SNORA63.6-201ENST00000364921 119 ntBASIC-0.61□□□□□ -2.51
NDNQ99608 RNU2-51P-201ENST00000410708 197 ntBASIC-0.61□□□□□ -2.51
NDNQ99608 AC097510.1-201ENST00000510945 133 ntBASIC-0.61□□□□□ -2.51
NDNQ99608 MIR4802-201ENST00000581881 80 ntBASIC-0.61□□□□□ -2.51
NDNQ99608 U7.3-201ENST00000616123 62 ntBASIC-0.61□□□□□ -2.51
NDNQ99608 MIR2052-201ENST00000636055 55 ntBASIC-0.61□□□□□ -2.51
NDNQ99608 RNU6-502P-201ENST00000362419 108 ntBASIC-0.62□□□□□ -2.51
NDNQ99608 SNORD90-201ENST00000391145 111 ntBASIC-0.62□□□□□ -2.51
NDNQ99608 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.62□□□□□ -2.51
NDNQ99608 AP001180.6-201ENST00000584918 159 ntBASIC-0.62□□□□□ -2.51
NDNQ99608 MIR196A2-201ENST00000385189 110 ntBASIC-0.63□□□□□ -2.51
NDNQ99608 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
NDNQ99608 AL603908.1-201ENST00000406098 201 ntBASIC-0.63□□□□□ -2.51
NDNQ99608 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.63□□□□□ -2.51
NDNQ99608 MIR4796-201ENST00000580742 81 ntBASIC-0.63□□□□□ -2.51
NDNQ99608 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.64□□□□□ -2.51
NDNQ99608 RNU6-973P-201ENST00000364690 107 ntBASIC-0.64□□□□□ -2.51
NDNQ99608 AL031737.1-201ENST00000450125 223 ntBASIC-0.64□□□□□ -2.51
NDNQ99608 snoU13.13-201ENST00000458842 104 ntBASIC-0.64□□□□□ -2.51
NDNQ99608 RNU6-162P-201ENST00000516228 103 ntBASIC-0.64□□□□□ -2.51
NDNQ99608 MIR4432-201ENST00000581823 84 ntBASIC-0.64□□□□□ -2.51
NDNQ99608 MIR4280-201ENST00000582178 76 ntBASIC-0.64□□□□□ -2.51
NDNQ99608 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.65□□□□□ -2.51
NDNQ99608 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.65□□□□□ -2.51
NDNQ99608 SNORD56B-201ENST00000384713 71 ntBASIC-0.65□□□□□ -2.51
NDNQ99608 SNORA32.3-201ENST00000384772 121 ntBASIC-0.65□□□□□ -2.51
NDNQ99608 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.65□□□□□ -2.51
NDNQ99608 RNU6-284P-201ENST00000411105 106 ntBASIC-0.65□□□□□ -2.51
NDNQ99608 MTATP8P2-201ENST00000435212 202 ntBASIC-0.65□□□□□ -2.51
NDNQ99608 AC114755.3-201ENST00000481111 251 ntBASIC-0.65□□□□□ -2.51
NDNQ99608 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.65□□□□□ -2.51
NDNQ99608 MIR548AZ-201ENST00000616567 95 ntBASIC-0.65□□□□□ -2.51
NDNQ99608 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.66□□□□□ -2.52
NDNQ99608 AL445193.1-201ENST00000441183 141 ntBASIC-0.66□□□□□ -2.52
NDNQ99608 RNU6-382P-201ENST00000365181 106 ntBASIC-0.67□□□□□ -2.52
NDNQ99608 MIR5589-201ENST00000579442 60 ntBASIC-0.67□□□□□ -2.52
NDNQ99608 MIR6773-201ENST00000612812 74 ntBASIC-0.67□□□□□ -2.52
NDNQ99608 AL391099.1-201ENST00000624635 187 ntBASIC-0.67□□□□□ -2.52
NDNQ99608 MIR101-1-201ENST00000362265 75 ntBASIC-0.68□□□□□ -2.52
NDNQ99608 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.68□□□□□ -2.52
NDNQ99608 MIR204-201ENST00000385200 110 ntBASIC-0.68□□□□□ -2.52
NDNQ99608 SNORA13-201ENST00000458790 133 ntBASIC-0.68□□□□□ -2.52
NDNQ99608 snoU13.17-201ENST00000458802 104 ntBASIC-0.68□□□□□ -2.52
NDNQ99608 MIR6851-201ENST00000617060 67 ntBASIC-0.68□□□□□ -2.52
NDNQ99608 RNU6-824P-201ENST00000363724 104 ntBASIC-0.69□□□□□ -2.52
NDNQ99608 RNU6-990P-201ENST00000364385 104 ntBASIC-0.69□□□□□ -2.52
NDNQ99608 RNU6-260P-201ENST00000384092 107 ntBASIC-0.69□□□□□ -2.52
NDNQ99608 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.69□□□□□ -2.52
NDNQ99608 AC021146.9-201ENST00000512503 156 ntBASIC-0.69□□□□□ -2.52
NDNQ99608 MIR4493-201ENST00000584016 73 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms