Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 MIR1273G-201ENST00000577677 100 ntBASIC0.54□□□□□ -2.32
PNKPQ96T60 YWHAEP2-201ENST00000580066 112 ntBASIC0.54□□□□□ -2.32
PNKPQ96T60 MIR6755-201ENST00000619993 66 ntBASIC0.54□□□□□ -2.32
PNKPQ96T60 MIR3202-2-201ENST00000635980 79 ntBASIC0.54□□□□□ -2.32
PNKPQ96T60 SNORD44.1-201ENST00000363202 61 ntBASIC0.53□□□□□ -2.32
PNKPQ96T60 RNU6-824P-201ENST00000363724 104 ntBASIC0.53□□□□□ -2.32
PNKPQ96T60 Y_RNA.258-201ENST00000364613 105 ntBASIC0.53□□□□□ -2.32
PNKPQ96T60 MIR1255A-201ENST00000408338 113 ntBASIC0.53□□□□□ -2.32
PNKPQ96T60 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.53□□□□□ -2.32
PNKPQ96T60 RNA5SP121-201ENST00000516537 101 ntBASIC0.53□□□□□ -2.32
PNKPQ96T60 RNU6-557P-201ENST00000516842 110 ntBASIC0.53□□□□□ -2.32
PNKPQ96T60 AC069503.3-201ENST00000618674 145 ntBASIC0.53□□□□□ -2.32
PNKPQ96T60 Y_RNA.371-201ENST00000365591 113 ntBASIC0.52□□□□□ -2.33
PNKPQ96T60 SNORD78.1-201ENST00000390866 65 ntBASIC0.52□□□□□ -2.33
PNKPQ96T60 AC097510.1-201ENST00000510945 133 ntBASIC0.52□□□□□ -2.33
PNKPQ96T60 RNU6-1232P-201ENST00000516299 86 ntBASIC0.52□□□□□ -2.33
PNKPQ96T60 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.52□□□□□ -2.33
PNKPQ96T60 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
PNKPQ96T60 RNU6-686P-201ENST00000364839 107 ntBASIC0.51□□□□□ -2.33
PNKPQ96T60 SNORA2A-201ENST00000383885 135 ntBASIC0.51□□□□□ -2.33
PNKPQ96T60 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
PNKPQ96T60 Y_RNA.660-201ENST00000516002 120 ntBASIC0.51□□□□□ -2.33
PNKPQ96T60 MIR4473-201ENST00000583731 91 ntBASIC0.51□□□□□ -2.33
PNKPQ96T60 MIR103A1-201ENST00000362165 78 ntBASIC0.5□□□□□ -2.33
PNKPQ96T60 MIRLET7A1-201ENST00000362295 80 ntBASIC0.5□□□□□ -2.33
PNKPQ96T60 Y_RNA.12-201ENST00000362393 112 ntBASIC0.5□□□□□ -2.33
PNKPQ96T60 Y_RNA.94-201ENST00000363068 106 ntBASIC0.5□□□□□ -2.33
PNKPQ96T60 Y_RNA.264-201ENST00000364665 102 ntBASIC0.5□□□□□ -2.33
PNKPQ96T60 MIR4712-201ENST00000583750 82 ntBASIC0.5□□□□□ -2.33
PNKPQ96T60 RNU6-382P-201ENST00000365181 106 ntBASIC0.49□□□□□ -2.33
PNKPQ96T60 HMGN2P22-201ENST00000427588 175 ntBASIC0.49□□□□□ -2.33
PNKPQ96T60 SNORD42B-201ENST00000458893 67 ntBASIC0.49□□□□□ -2.33
PNKPQ96T60 MIR5706-201ENST00000579841 80 ntBASIC0.49□□□□□ -2.33
PNKPQ96T60 MIR4773-1-201ENST00000637203 78 ntBASIC0.49□□□□□ -2.33
PNKPQ96T60 MIRLET7D-201ENST00000362263 87 ntBASIC0.48□□□□□ -2.33
PNKPQ96T60 RNU6-315P-201ENST00000362666 107 ntBASIC0.48□□□□□ -2.33
PNKPQ96T60 RNU6-495P-201ENST00000362995 107 ntBASIC0.48□□□□□ -2.33
PNKPQ96T60 YWHAEP3-201ENST00000582767 121 ntBASIC0.48□□□□□ -2.33
PNKPQ96T60 AC243829.6-201ENST00000612652 106 ntBASIC0.48□□□□□ -2.33
PNKPQ96T60 RNU6-340P-201ENST00000364005 107 ntBASIC0.47□□□□□ -2.33
PNKPQ96T60 MIR760-201ENST00000390220 80 ntBASIC0.47□□□□□ -2.33
PNKPQ96T60 RNA5SP225-201ENST00000410874 135 ntBASIC0.47□□□□□ -2.33
PNKPQ96T60 MIR548AE1-201ENST00000583292 70 ntBASIC0.47□□□□□ -2.33
PNKPQ96T60 U6.81-201ENST00000612550 106 ntBASIC0.47□□□□□ -2.33
PNKPQ96T60 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.47□□□□□ -2.33
PNKPQ96T60 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.47□□□□□ -2.33
PNKPQ96T60 MIR924-201ENST00000638017 53 ntBASIC0.47□□□□□ -2.33
PNKPQ96T60 SNORD75.2-201ENST00000408784 58 ntBASIC0.46□□□□□ -2.34
PNKPQ96T60 Y_RNA.606-201ENST00000410579 103 ntBASIC0.46□□□□□ -2.34
PNKPQ96T60 Y_RNA.532-201ENST00000384590 113 ntBASIC0.45□□□□□ -2.34
PNKPQ96T60 Y_RNA.125-201ENST00000363371 111 ntBASIC0.44□□□□□ -2.34
PNKPQ96T60 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
PNKPQ96T60 Y_RNA.407-201ENST00000383986 113 ntBASIC0.44□□□□□ -2.34
PNKPQ96T60 RNU7-24P-201ENST00000458867 62 ntBASIC0.44□□□□□ -2.34
PNKPQ96T60 RNU6-848P-201ENST00000515948 107 ntBASIC0.44□□□□□ -2.34
PNKPQ96T60 RNU6-863P-201ENST00000515989 104 ntBASIC0.44□□□□□ -2.34
PNKPQ96T60 RNU7-129P-201ENST00000516128 62 ntBASIC0.44□□□□□ -2.34
PNKPQ96T60 RNU6-617P-201ENST00000516147 107 ntBASIC0.44□□□□□ -2.34
PNKPQ96T60 RNU6-473P-201ENST00000516164 107 ntBASIC0.44□□□□□ -2.34
PNKPQ96T60 RNU6-1049P-201ENST00000516414 107 ntBASIC0.44□□□□□ -2.34
PNKPQ96T60 MIR499B-201ENST00000636498 73 ntBASIC0.44□□□□□ -2.34
PNKPQ96T60 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
PNKPQ96T60 MIR501-201ENST00000390204 84 ntBASIC0.43□□□□□ -2.34
PNKPQ96T60 RNU6-303P-201ENST00000517091 106 ntBASIC0.43□□□□□ -2.34
PNKPQ96T60 MIR4484-201ENST00000582855 83 ntBASIC0.43□□□□□ -2.34
PNKPQ96T60 RNU6-1094P-201ENST00000362416 104 ntBASIC0.42□□□□□ -2.34
PNKPQ96T60 RNU6-681P-201ENST00000364012 104 ntBASIC0.42□□□□□ -2.34
PNKPQ96T60 RNA5SP128-201ENST00000365305 116 ntBASIC0.42□□□□□ -2.34
PNKPQ96T60 RNU6-815P-201ENST00000384080 113 ntBASIC0.42□□□□□ -2.34
PNKPQ96T60 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
PNKPQ96T60 MIR652-201ENST00000385278 98 ntBASIC0.42□□□□□ -2.34
PNKPQ96T60 RNU6-380P-201ENST00000410207 107 ntBASIC0.42□□□□□ -2.34
PNKPQ96T60 RNU6-274P-201ENST00000459566 107 ntBASIC0.42□□□□□ -2.34
PNKPQ96T60 U7.6-201ENST00000610841 64 ntBASIC0.42□□□□□ -2.34
PNKPQ96T60 uc_338.10-201ENST00000621872 182 ntBASIC0.42□□□□□ -2.34
PNKPQ96T60 RNU6-1275P-201ENST00000391087 107 ntBASIC0.41□□□□□ -2.34
PNKPQ96T60 RNU6-279P-201ENST00000391297 101 ntBASIC0.41□□□□□ -2.34
PNKPQ96T60 RNU6-857P-201ENST00000515893 110 ntBASIC0.41□□□□□ -2.34
PNKPQ96T60 Y_RNA.685-201ENST00000516532 108 ntBASIC0.41□□□□□ -2.34
PNKPQ96T60 RNA5SP395-201ENST00000516567 118 ntBASIC0.41□□□□□ -2.34
PNKPQ96T60 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
PNKPQ96T60 MIR330-201ENST00000362196 94 ntBASIC0.4□□□□□ -2.35
PNKPQ96T60 AC073261.1-201ENST00000429409 121 ntBASIC0.4□□□□□ -2.35
PNKPQ96T60 RNA5SP330-201ENST00000517096 96 ntBASIC0.4□□□□□ -2.35
PNKPQ96T60 MIR4677-201ENST00000584153 80 ntBASIC0.4□□□□□ -2.35
PNKPQ96T60 MIR8087-201ENST00000612745 78 ntBASIC0.4□□□□□ -2.35
PNKPQ96T60 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
PNKPQ96T60 RNU6-330P-201ENST00000363015 107 ntBASIC0.39□□□□□ -2.35
PNKPQ96T60 RNA5SP62-201ENST00000363457 110 ntBASIC0.39□□□□□ -2.35
PNKPQ96T60 RNU6-154P-201ENST00000384306 106 ntBASIC0.39□□□□□ -2.35
PNKPQ96T60 MIR516B1-201ENST00000385211 90 ntBASIC0.39□□□□□ -2.35
PNKPQ96T60 AC074348.1-201ENST00000426503 132 ntBASIC0.39□□□□□ -2.35
PNKPQ96T60 AL691482.2-201ENST00000457453 84 ntBASIC0.39□□□□□ -2.35
PNKPQ96T60 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
PNKPQ96T60 SNORA9.1-201ENST00000362412 131 ntBASIC0.38□□□□□ -2.35
PNKPQ96T60 Y_RNA.115-201ENST00000363272 98 ntBASIC0.38□□□□□ -2.35
PNKPQ96T60 RNA5SP457-201ENST00000363657 124 ntBASIC0.38□□□□□ -2.35
PNKPQ96T60 RNU6-1039P-201ENST00000383931 107 ntBASIC0.38□□□□□ -2.35
PNKPQ96T60 MIR203A-201ENST00000384836 110 ntBASIC0.38□□□□□ -2.35
PNKPQ96T60 SCARNA18B-201ENST00000458806 135 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms