Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 MIR3115-201ENST00000577915 68 ntBASIC-1.22□□□□□ -2.6
PKNOX2Q96KN3 SNORD115-23-201ENST00000364461 82 ntBASIC-1.23□□□□□ -2.61
PKNOX2Q96KN3 RNU6-132P-201ENST00000383863 107 ntBASIC-1.23□□□□□ -2.61
PKNOX2Q96KN3 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.23□□□□□ -2.61
PKNOX2Q96KN3 MIR569-201ENST00000385228 96 ntBASIC-1.23□□□□□ -2.61
PKNOX2Q96KN3 MIR548U-201ENST00000390728 81 ntBASIC-1.23□□□□□ -2.61
PKNOX2Q96KN3 RNU6-337P-201ENST00000391243 106 ntBASIC-1.23□□□□□ -2.61
PKNOX2Q96KN3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
PKNOX2Q96KN3 MIR3165-201ENST00000579874 75 ntBASIC-1.23□□□□□ -2.61
PKNOX2Q96KN3 MIR4439-201ENST00000583746 80 ntBASIC-1.23□□□□□ -2.61
PKNOX2Q96KN3 RNY3P2-201ENST00000362918 102 ntBASIC-1.24□□□□□ -2.61
PKNOX2Q96KN3 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.24□□□□□ -2.61
PKNOX2Q96KN3 MIR4679-2-201ENST00000578358 77 ntBASIC-1.24□□□□□ -2.61
PKNOX2Q96KN3 AC004792.1-201ENST00000614523 137 ntBASIC-1.24□□□□□ -2.61
PKNOX2Q96KN3 RNU6-694P-201ENST00000364071 147 ntBASIC-1.25□□□□□ -2.61
PKNOX2Q96KN3 RNU6-463P-201ENST00000384340 107 ntBASIC-1.25□□□□□ -2.61
PKNOX2Q96KN3 MIR147A-201ENST00000385079 72 ntBASIC-1.25□□□□□ -2.61
PKNOX2Q96KN3 MIR601-201ENST00000385256 79 ntBASIC-1.25□□□□□ -2.61
PKNOX2Q96KN3 MIR1468-201ENST00000410600 86 ntBASIC-1.25□□□□□ -2.61
PKNOX2Q96KN3 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.25□□□□□ -2.61
PKNOX2Q96KN3 MIR378F-201ENST00000578143 78 ntBASIC-1.25□□□□□ -2.61
PKNOX2Q96KN3 MIR3140-201ENST00000583685 90 ntBASIC-1.25□□□□□ -2.61
PKNOX2Q96KN3 MIR382-201ENST00000637119 76 ntBASIC-1.25□□□□□ -2.61
PKNOX2Q96KN3 MIR198-201ENST00000637333 62 ntBASIC-1.25□□□□□ -2.61
PKNOX2Q96KN3 RNU6-379P-201ENST00000363813 104 ntBASIC-1.26□□□□□ -2.61
PKNOX2Q96KN3 RNU6-804P-201ENST00000384286 107 ntBASIC-1.26□□□□□ -2.61
PKNOX2Q96KN3 RNU6-905P-201ENST00000384434 107 ntBASIC-1.26□□□□□ -2.61
PKNOX2Q96KN3 RNA5SP470-201ENST00000516463 106 ntBASIC-1.26□□□□□ -2.61
PKNOX2Q96KN3 AC068339.1-201ENST00000526965 141 ntBASIC-1.26□□□□□ -2.61
PKNOX2Q96KN3 MIR3144-201ENST00000579460 79 ntBASIC-1.26□□□□□ -2.61
PKNOX2Q96KN3 MIR3064-201ENST00000581130 66 ntBASIC-1.26□□□□□ -2.61
PKNOX2Q96KN3 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.28□□□□□ -2.61
PKNOX2Q96KN3 SNORA24B-201ENST00000384176 131 ntBASIC-1.28□□□□□ -2.61
PKNOX2Q96KN3 RNU6-644P-201ENST00000391155 98 ntBASIC-1.28□□□□□ -2.61
PKNOX2Q96KN3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.28□□□□□ -2.61
PKNOX2Q96KN3 RNU7-24P-201ENST00000458867 62 ntBASIC-1.28□□□□□ -2.61
PKNOX2Q96KN3 MIR3613-201ENST00000579844 87 ntBASIC-1.28□□□□□ -2.61
PKNOX2Q96KN3 AC104996.3-201ENST00000590718 94 ntBASIC-1.28□□□□□ -2.61
PKNOX2Q96KN3 AL035470.1-201ENST00000622571 220 ntBASIC-1.28□□□□□ -2.61
PKNOX2Q96KN3 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.29□□□□□ -2.62
PKNOX2Q96KN3 SNORD45B-201ENST00000364617 72 ntBASIC-1.29□□□□□ -2.62
PKNOX2Q96KN3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.29□□□□□ -2.62
PKNOX2Q96KN3 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.29□□□□□ -2.62
PKNOX2Q96KN3 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.3□□□□□ -2.62
PKNOX2Q96KN3 RNU6-990P-201ENST00000364385 104 ntBASIC-1.3□□□□□ -2.62
PKNOX2Q96KN3 SNORA62.4-201ENST00000365504 151 ntBASIC-1.3□□□□□ -2.62
PKNOX2Q96KN3 SNORD75.2-201ENST00000408784 58 ntBASIC-1.3□□□□□ -2.62
PKNOX2Q96KN3 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.3□□□□□ -2.62
PKNOX2Q96KN3 SNORD18.2-201ENST00000459604 70 ntBASIC-1.3□□□□□ -2.62
PKNOX2Q96KN3 AC021146.9-201ENST00000512503 156 ntBASIC-1.3□□□□□ -2.62
PKNOX2Q96KN3 YWHAEP3-201ENST00000582767 121 ntBASIC-1.3□□□□□ -2.62
PKNOX2Q96KN3 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.31□□□□□ -2.62
PKNOX2Q96KN3 RNU6-813P-201ENST00000384691 107 ntBASIC-1.31□□□□□ -2.62
PKNOX2Q96KN3 SNORD4B-201ENST00000459083 72 ntBASIC-1.31□□□□□ -2.62
PKNOX2Q96KN3 RNU6-388P-201ENST00000517012 105 ntBASIC-1.31□□□□□ -2.62
PKNOX2Q96KN3 RNU6-389P-201ENST00000517048 105 ntBASIC-1.31□□□□□ -2.62
PKNOX2Q96KN3 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.32□□□□□ -2.62
PKNOX2Q96KN3 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.32□□□□□ -2.62
PKNOX2Q96KN3 RNA5SP272-201ENST00000516095 111 ntBASIC-1.32□□□□□ -2.62
PKNOX2Q96KN3 RNA5SP461-201ENST00000516451 104 ntBASIC-1.32□□□□□ -2.62
PKNOX2Q96KN3 AC103810.7-201ENST00000607821 91 ntBASIC-1.32□□□□□ -2.62
PKNOX2Q96KN3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.32□□□□□ -2.62
PKNOX2Q96KN3 U6.96-201ENST00000636425 70 ntBASIC-1.32□□□□□ -2.62
PKNOX2Q96KN3 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.33□□□□□ -2.62
PKNOX2Q96KN3 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.33□□□□□ -2.62
PKNOX2Q96KN3 MIR548A1-201ENST00000385041 97 ntBASIC-1.33□□□□□ -2.62
PKNOX2Q96KN3 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.33□□□□□ -2.62
PKNOX2Q96KN3 RNU6-772P-201ENST00000516042 105 ntBASIC-1.33□□□□□ -2.62
PKNOX2Q96KN3 RNU6-62P-201ENST00000516526 102 ntBASIC-1.33□□□□□ -2.62
PKNOX2Q96KN3 MIR4306-201ENST00000583390 91 ntBASIC-1.33□□□□□ -2.62
PKNOX2Q96KN3 AL157777.2-201ENST00000258070 137 ntBASIC-1.34□□□□□ -2.62
PKNOX2Q96KN3 RNU6-426P-201ENST00000516464 97 ntBASIC-1.34□□□□□ -2.62
PKNOX2Q96KN3 MIR548Z-201ENST00000584743 97 ntBASIC-1.34□□□□□ -2.62
PKNOX2Q96KN3 MIR124-2-201ENST00000385081 109 ntBASIC-1.35□□□□□ -2.63
PKNOX2Q96KN3 MT-TG-201ENST00000387429 68 ntBASIC-1.35□□□□□ -2.63
PKNOX2Q96KN3 MTND4LP9-201ENST00000427694 174 ntBASIC-1.35□□□□□ -2.63
PKNOX2Q96KN3 snoU83B.1-201ENST00000517136 88 ntBASIC-1.35□□□□□ -2.63
PKNOX2Q96KN3 RNU6-208P-201ENST00000362431 107 ntBASIC-1.36□□□□□ -2.63
PKNOX2Q96KN3 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.36□□□□□ -2.63
PKNOX2Q96KN3 RNU6-519P-201ENST00000410590 108 ntBASIC-1.36□□□□□ -2.63
PKNOX2Q96KN3 MIR5009-201ENST00000578736 100 ntBASIC-1.36□□□□□ -2.63
PKNOX2Q96KN3 MTND5P41-201ENST00000517498 206 ntBASIC-1.37□□□□□ -2.63
PKNOX2Q96KN3 AC006254.2-201ENST00000603259 279 ntBASIC-1.37□□□□□ -2.63
PKNOX2Q96KN3 AL353621.2-201ENST00000605340 133 ntBASIC-1.37□□□□□ -2.63
PKNOX2Q96KN3 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.38□□□□□ -2.63
PKNOX2Q96KN3 RNA5SP292-201ENST00000390974 118 ntBASIC-1.38□□□□□ -2.63
PKNOX2Q96KN3 MTATP6P29-201ENST00000415057 132 ntBASIC-1.38□□□□□ -2.63
PKNOX2Q96KN3 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.39□□□□□ -2.63
PKNOX2Q96KN3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.39□□□□□ -2.63
PKNOX2Q96KN3 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.39□□□□□ -2.63
PKNOX2Q96KN3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.39□□□□□ -2.63
PKNOX2Q96KN3 AC090617.8-201ENST00000623339 167 ntBASIC-1.39□□□□□ -2.63
PKNOX2Q96KN3 SNORD114-17-201ENST00000364699 75 ntBASIC-1.4□□□□□ -2.63
PKNOX2Q96KN3 RNU6-382P-201ENST00000365181 106 ntBASIC-1.4□□□□□ -2.63
PKNOX2Q96KN3 SNORD90-201ENST00000391145 111 ntBASIC-1.4□□□□□ -2.63
PKNOX2Q96KN3 SNORA18.5-201ENST00000516616 101 ntBASIC-1.4□□□□□ -2.63
PKNOX2Q96KN3 RNU6-182P-201ENST00000516970 105 ntBASIC-1.4□□□□□ -2.63
PKNOX2Q96KN3 AL353803.5-201ENST00000599815 141 ntBASIC-1.4□□□□□ -2.63
PKNOX2Q96KN3 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.41□□□□□ -2.64
PKNOX2Q96KN3 RNU6-260P-201ENST00000384092 107 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 248.5 ms