Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
PDLIM2Q96JY6 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.69□□□□□ -2.3
PDLIM2Q96JY6 Y_RNA.681-201ENST00000516445 113 ntBASIC0.69□□□□□ -2.3
PDLIM2Q96JY6 NAMPTP3-201ENST00000569273 224 ntBASIC0.69□□□□□ -2.3
PDLIM2Q96JY6 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
PDLIM2Q96JY6 AC092634.7-201ENST00000621022 103 ntBASIC0.69□□□□□ -2.3
PDLIM2Q96JY6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
PDLIM2Q96JY6 Y_RNA.545-201ENST00000384652 105 ntBASIC0.68□□□□□ -2.3
PDLIM2Q96JY6 Y_RNA.565-201ENST00000384719 101 ntBASIC0.68□□□□□ -2.3
PDLIM2Q96JY6 AL691482.2-201ENST00000457453 84 ntBASIC0.68□□□□□ -2.3
PDLIM2Q96JY6 RNU5B-6P-201ENST00000516765 68 ntBASIC0.68□□□□□ -2.3
PDLIM2Q96JY6 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
PDLIM2Q96JY6 MIR664A-201ENST00000626086 82 ntBASIC0.68□□□□□ -2.3
PDLIM2Q96JY6 RNU6-411P-201ENST00000384451 107 ntBASIC0.67□□□□□ -2.3
PDLIM2Q96JY6 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
PDLIM2Q96JY6 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
PDLIM2Q96JY6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
PDLIM2Q96JY6 RNU7-24P-201ENST00000458867 62 ntBASIC0.67□□□□□ -2.3
PDLIM2Q96JY6 MIR5000-201ENST00000577717 103 ntBASIC0.67□□□□□ -2.3
PDLIM2Q96JY6 MIR3675-201ENST00000583661 73 ntBASIC0.67□□□□□ -2.3
PDLIM2Q96JY6 SNORA25.18-201ENST00000607153 114 ntBASIC0.67□□□□□ -2.3
PDLIM2Q96JY6 AC073869.9-201ENST00000641610 120 ntBASIC0.67□□□□□ -2.3
PDLIM2Q96JY6 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
PDLIM2Q96JY6 SNORD42B-201ENST00000458893 67 ntBASIC0.66□□□□□ -2.3
PDLIM2Q96JY6 MIR4752-201ENST00000579672 72 ntBASIC0.66□□□□□ -2.3
PDLIM2Q96JY6 AC069503.3-201ENST00000618674 145 ntBASIC0.66□□□□□ -2.3
PDLIM2Q96JY6 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
PDLIM2Q96JY6 SNORD110-201ENST00000408189 75 ntBASIC0.65□□□□□ -2.31
PDLIM2Q96JY6 SNORA40.8-201ENST00000411034 126 ntBASIC0.65□□□□□ -2.31
PDLIM2Q96JY6 AC006210.1-201ENST00000424882 111 ntBASIC0.65□□□□□ -2.31
PDLIM2Q96JY6 AC069271.1-201ENST00000445577 156 ntBASIC0.65□□□□□ -2.31
PDLIM2Q96JY6 RNU6-752P-201ENST00000516376 102 ntBASIC0.65□□□□□ -2.31
PDLIM2Q96JY6 AC018659.1-201ENST00000551083 169 ntBASIC0.65□□□□□ -2.31
PDLIM2Q96JY6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
PDLIM2Q96JY6 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
PDLIM2Q96JY6 SNORD118-201ENST00000363593 134 ntBASIC0.63□□□□□ -2.31
PDLIM2Q96JY6 RNU6-1039P-201ENST00000383931 107 ntBASIC0.63□□□□□ -2.31
PDLIM2Q96JY6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.63□□□□□ -2.31
PDLIM2Q96JY6 SNORD71-201ENST00000411292 86 ntBASIC0.63□□□□□ -2.31
PDLIM2Q96JY6 AL157398.1-201ENST00000452981 186 ntBASIC0.63□□□□□ -2.31
PDLIM2Q96JY6 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
PDLIM2Q96JY6 SNORA70.25-201ENST00000612741 95 ntBASIC0.63□□□□□ -2.31
PDLIM2Q96JY6 MIR6509-201ENST00000614603 85 ntBASIC0.63□□□□□ -2.31
PDLIM2Q96JY6 MIR6515-201ENST00000619843 57 ntBASIC0.63□□□□□ -2.31
PDLIM2Q96JY6 MIR203A-201ENST00000384836 110 ntBASIC0.62□□□□□ -2.31
PDLIM2Q96JY6 RNU6-523P-201ENST00000516304 54 ntBASIC0.62□□□□□ -2.31
PDLIM2Q96JY6 RNU6-1015P-201ENST00000517121 99 ntBASIC0.62□□□□□ -2.31
PDLIM2Q96JY6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
PDLIM2Q96JY6 SNORD45.1-201ENST00000363181 77 ntBASIC0.61□□□□□ -2.31
PDLIM2Q96JY6 RNU6-1241P-201ENST00000384536 107 ntBASIC0.61□□□□□ -2.31
PDLIM2Q96JY6 Y_RNA.540-201ENST00000384638 111 ntBASIC0.61□□□□□ -2.31
PDLIM2Q96JY6 MIR154-201ENST00000385243 84 ntBASIC0.61□□□□□ -2.31
PDLIM2Q96JY6 RNU6-587P-201ENST00000391282 106 ntBASIC0.61□□□□□ -2.31
PDLIM2Q96JY6 RNU6-687P-201ENST00000516443 89 ntBASIC0.61□□□□□ -2.31
PDLIM2Q96JY6 MIR4473-201ENST00000583731 91 ntBASIC0.61□□□□□ -2.31
PDLIM2Q96JY6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
PDLIM2Q96JY6 SNORD114-4-201ENST00000363962 75 ntBASIC0.6□□□□□ -2.31
PDLIM2Q96JY6 MIR518A1-201ENST00000385068 85 ntBASIC0.6□□□□□ -2.31
PDLIM2Q96JY6 RNA5SP436-201ENST00000516020 115 ntBASIC0.6□□□□□ -2.31
PDLIM2Q96JY6 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
PDLIM2Q96JY6 Y_RNA.407-201ENST00000383986 113 ntBASIC0.59□□□□□ -2.31
PDLIM2Q96JY6 AC073261.1-201ENST00000429409 121 ntBASIC0.59□□□□□ -2.31
PDLIM2Q96JY6 PVT1_3.1-201ENST00000620853 95 ntBASIC0.59□□□□□ -2.31
PDLIM2Q96JY6 Y_RNA.423-201ENST00000384057 113 ntBASIC0.58□□□□□ -2.32
PDLIM2Q96JY6 RNU6-260P-201ENST00000384092 107 ntBASIC0.58□□□□□ -2.32
PDLIM2Q96JY6 RNU6-871P-201ENST00000516122 100 ntBASIC0.58□□□□□ -2.32
PDLIM2Q96JY6 RNU6-990P-201ENST00000364385 104 ntBASIC0.57□□□□□ -2.32
PDLIM2Q96JY6 SNORA2A-201ENST00000383885 135 ntBASIC0.57□□□□□ -2.32
PDLIM2Q96JY6 MIR598-201ENST00000384868 97 ntBASIC0.57□□□□□ -2.32
PDLIM2Q96JY6 RNU6-229P-201ENST00000516614 102 ntBASIC0.57□□□□□ -2.32
PDLIM2Q96JY6 MIR5706-201ENST00000579841 80 ntBASIC0.57□□□□□ -2.32
PDLIM2Q96JY6 MIR548AE1-201ENST00000583292 70 ntBASIC0.57□□□□□ -2.32
PDLIM2Q96JY6 RNU1-29P-201ENST00000606574 126 ntBASIC0.57□□□□□ -2.32
PDLIM2Q96JY6 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
PDLIM2Q96JY6 MIR652-201ENST00000385278 98 ntBASIC0.56□□□□□ -2.32
PDLIM2Q96JY6 RNU6-604P-201ENST00000390917 100 ntBASIC0.56□□□□□ -2.32
PDLIM2Q96JY6 RNU6-634P-201ENST00000459134 106 ntBASIC0.56□□□□□ -2.32
PDLIM2Q96JY6 MIR3657-201ENST00000584818 117 ntBASIC0.56□□□□□ -2.32
PDLIM2Q96JY6 uc_338.10-201ENST00000621872 182 ntBASIC0.56□□□□□ -2.32
PDLIM2Q96JY6 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
PDLIM2Q96JY6 HMGN2P22-201ENST00000427588 175 ntBASIC0.55□□□□□ -2.32
PDLIM2Q96JY6 AC098934.3-201ENST00000430450 190 ntBASIC0.55□□□□□ -2.32
PDLIM2Q96JY6 MIR8053-201ENST00000613344 75 ntBASIC0.55□□□□□ -2.32
PDLIM2Q96JY6 SNORD115-31-201ENST00000365318 82 ntBASIC0.54□□□□□ -2.32
PDLIM2Q96JY6 SNORD45A-201ENST00000384512 84 ntBASIC0.54□□□□□ -2.32
PDLIM2Q96JY6 RNA5SP147-201ENST00000516493 109 ntBASIC0.54□□□□□ -2.32
PDLIM2Q96JY6 U7.6-201ENST00000610841 64 ntBASIC0.54□□□□□ -2.32
PDLIM2Q96JY6 SNORD115-22-201ENST00000364456 82 ntBASIC0.53□□□□□ -2.32
PDLIM2Q96JY6 RNU6-895P-201ENST00000384125 103 ntBASIC0.53□□□□□ -2.32
PDLIM2Q96JY6 MIR7-2-201ENST00000384970 110 ntBASIC0.53□□□□□ -2.32
PDLIM2Q96JY6 RNU6-1232P-201ENST00000516299 86 ntBASIC0.53□□□□□ -2.32
PDLIM2Q96JY6 SCARNA17.3-201ENST00000516381 125 ntBASIC0.53□□□□□ -2.32
PDLIM2Q96JY6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.52□□□□□ -2.33
PDLIM2Q96JY6 SNORA2.1-201ENST00000363089 137 ntBASIC0.52□□□□□ -2.33
PDLIM2Q96JY6 RNU6-881P-201ENST00000516813 102 ntBASIC0.52□□□□□ -2.33
PDLIM2Q96JY6 MIR6755-201ENST00000619993 66 ntBASIC0.52□□□□□ -2.33
PDLIM2Q96JY6 MIR6513-201ENST00000621188 64 ntBASIC0.52□□□□□ -2.33
PDLIM2Q96JY6 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
PDLIM2Q96JY6 Y_RNA.125-201ENST00000363371 111 ntBASIC0.51□□□□□ -2.33
PDLIM2Q96JY6 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms