Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
MS4A4AQ96JQ5 SNORA33.1-201ENST00000364957 130 ntBASIC2.02□□□□□ -2.09
MS4A4AQ96JQ5 MIR573-201ENST00000384964 99 ntBASIC2.02□□□□□ -2.09
MS4A4AQ96JQ5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
MS4A4AQ96JQ5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
MS4A4AQ96JQ5 MIR1276-201ENST00000408707 83 ntBASIC2.01□□□□□ -2.09
MS4A4AQ96JQ5 MIR3612-201ENST00000579753 87 ntBASIC2.01□□□□□ -2.09
MS4A4AQ96JQ5 AC025627.3-201ENST00000582078 182 ntBASIC2.01□□□□□ -2.09
MS4A4AQ96JQ5 Y_RNA.246-201ENST00000364495 108 ntBASIC2□□□□□ -2.09
MS4A4AQ96JQ5 RNU6-392P-201ENST00000364926 101 ntBASIC2□□□□□ -2.09
MS4A4AQ96JQ5 RNU4-88P-201ENST00000411220 86 ntBASIC2□□□□□ -2.09
MS4A4AQ96JQ5 MIR200A-201ENST00000384875 90 ntBASIC1.99□□□□□ -2.09
MS4A4AQ96JQ5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.99□□□□□ -2.09
MS4A4AQ96JQ5 MIR6828-201ENST00000636181 60 ntBASIC1.99□□□□□ -2.09
MS4A4AQ96JQ5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
MS4A4AQ96JQ5 SNORA16.1-201ENST00000364597 132 ntBASIC1.98□□□□□ -2.09
MS4A4AQ96JQ5 Y_RNA.327-201ENST00000365201 102 ntBASIC1.98□□□□□ -2.09
MS4A4AQ96JQ5 RNA5SP227-201ENST00000516184 113 ntBASIC1.98□□□□□ -2.09
MS4A4AQ96JQ5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.98□□□□□ -2.09
MS4A4AQ96JQ5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.98□□□□□ -2.09
MS4A4AQ96JQ5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
MS4A4AQ96JQ5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MS4A4AQ96JQ5 SNORA25.8-201ENST00000364831 128 ntBASIC1.97□□□□□ -2.09
MS4A4AQ96JQ5 MIR652-201ENST00000385278 98 ntBASIC1.97□□□□□ -2.09
MS4A4AQ96JQ5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.97□□□□□ -2.09
MS4A4AQ96JQ5 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
MS4A4AQ96JQ5 AC006210.1-201ENST00000424882 111 ntBASIC1.96□□□□□ -2.1
MS4A4AQ96JQ5 RNU4-45P-201ENST00000365469 141 ntBASIC1.95□□□□□ -2.1
MS4A4AQ96JQ5 RNA5SP338-201ENST00000410495 85 ntBASIC1.95□□□□□ -2.1
MS4A4AQ96JQ5 AL021921.1-201ENST00000442774 93 ntBASIC1.95□□□□□ -2.1
MS4A4AQ96JQ5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.95□□□□□ -2.1
MS4A4AQ96JQ5 MIR6504-201ENST00000613520 61 ntBASIC1.95□□□□□ -2.1
MS4A4AQ96JQ5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
MS4A4AQ96JQ5 MIR19B1-201ENST00000384829 87 ntBASIC1.94□□□□□ -2.1
MS4A4AQ96JQ5 RNU6-717P-201ENST00000459076 104 ntBASIC1.94□□□□□ -2.1
MS4A4AQ96JQ5 snoU13.18-201ENST00000459483 104 ntBASIC1.94□□□□□ -2.1
MS4A4AQ96JQ5 RNU6-753P-201ENST00000363926 107 ntBASIC1.93□□□□□ -2.1
MS4A4AQ96JQ5 RNU1-42P-201ENST00000364033 160 ntBASIC1.93□□□□□ -2.1
MS4A4AQ96JQ5 Y_RNA.224-201ENST00000364308 111 ntBASIC1.93□□□□□ -2.1
MS4A4AQ96JQ5 SNORD110-201ENST00000408189 75 ntBASIC1.93□□□□□ -2.1
MS4A4AQ96JQ5 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
MS4A4AQ96JQ5 MIR4419B-201ENST00000577260 68 ntBASIC1.93□□□□□ -2.1
MS4A4AQ96JQ5 MIR548AD-201ENST00000584780 82 ntBASIC1.93□□□□□ -2.1
MS4A4AQ96JQ5 U6.96-201ENST00000636425 70 ntBASIC1.92□□□□□ -2.1
MS4A4AQ96JQ5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.92□□□□□ -2.1
MS4A4AQ96JQ5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.91□□□□□ -2.1
MS4A4AQ96JQ5 RNU6-231P-201ENST00000517122 103 ntBASIC1.91□□□□□ -2.1
MS4A4AQ96JQ5 MIR548E-201ENST00000408287 88 ntBASIC1.9□□□□□ -2.11
MS4A4AQ96JQ5 SNORD53B-201ENST00000577887 78 ntBASIC1.9□□□□□ -2.11
MS4A4AQ96JQ5 MIR4285-201ENST00000581001 85 ntBASIC1.9□□□□□ -2.11
MS4A4AQ96JQ5 RNA5SP327-201ENST00000362494 101 ntBASIC1.89□□□□□ -2.11
MS4A4AQ96JQ5 RNA5SP37-201ENST00000365420 130 ntBASIC1.89□□□□□ -2.11
MS4A4AQ96JQ5 CYP3A54P-201ENST00000566950 75 ntBASIC1.89□□□□□ -2.11
MS4A4AQ96JQ5 MIR4473-201ENST00000583731 91 ntBASIC1.89□□□□□ -2.11
MS4A4AQ96JQ5 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.89□□□□□ -2.11
MS4A4AQ96JQ5 Y_RNA.325-201ENST00000365171 122 ntBASIC1.88□□□□□ -2.11
MS4A4AQ96JQ5 SNORA41B-201ENST00000384785 128 ntBASIC1.88□□□□□ -2.11
MS4A4AQ96JQ5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.88□□□□□ -2.11
MS4A4AQ96JQ5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MS4A4AQ96JQ5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
MS4A4AQ96JQ5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
MS4A4AQ96JQ5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MS4A4AQ96JQ5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
MS4A4AQ96JQ5 SNORD2-201ENST00000459163 69 ntBASIC1.87□□□□□ -2.11
MS4A4AQ96JQ5 Y_RNA.74-201ENST00000362911 99 ntBASIC1.86□□□□□ -2.11
MS4A4AQ96JQ5 RNA5SP268-201ENST00000516828 124 ntBASIC1.86□□□□□ -2.11
MS4A4AQ96JQ5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
MS4A4AQ96JQ5 SNORA9.1-201ENST00000362412 131 ntBASIC1.85□□□□□ -2.11
MS4A4AQ96JQ5 MIR582-201ENST00000365731 98 ntBASIC1.85□□□□□ -2.11
MS4A4AQ96JQ5 SNORD116-16-201ENST00000384533 92 ntBASIC1.85□□□□□ -2.11
MS4A4AQ96JQ5 MIR4421-201ENST00000578133 69 ntBASIC1.85□□□□□ -2.11
MS4A4AQ96JQ5 MIR548AE1-201ENST00000583292 70 ntBASIC1.85□□□□□ -2.11
MS4A4AQ96JQ5 Y_RNA.540-201ENST00000384638 111 ntBASIC1.84□□□□□ -2.11
MS4A4AQ96JQ5 SNORD48-201ENST00000364953 64 ntBASIC1.83□□□□□ -2.12
MS4A4AQ96JQ5 SNORA67.6-201ENST00000391093 99 ntBASIC1.83□□□□□ -2.12
MS4A4AQ96JQ5 MIR1323-201ENST00000408090 73 ntBASIC1.83□□□□□ -2.12
MS4A4AQ96JQ5 RNU6-518P-201ENST00000516056 96 ntBASIC1.83□□□□□ -2.12
MS4A4AQ96JQ5 RNA5SP102-201ENST00000516865 106 ntBASIC1.83□□□□□ -2.12
MS4A4AQ96JQ5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MS4A4AQ96JQ5 MIR18A-201ENST00000362310 71 ntBASIC1.82□□□□□ -2.12
MS4A4AQ96JQ5 SNORD114-24-201ENST00000365029 72 ntBASIC1.82□□□□□ -2.12
MS4A4AQ96JQ5 RNU6-980P-201ENST00000516925 103 ntBASIC1.82□□□□□ -2.12
MS4A4AQ96JQ5 MIR4452-201ENST00000583004 71 ntBASIC1.82□□□□□ -2.12
MS4A4AQ96JQ5 MIR7110-201ENST00000612638 86 ntBASIC1.82□□□□□ -2.12
MS4A4AQ96JQ5 AC243829.6-201ENST00000612652 106 ntBASIC1.82□□□□□ -2.12
MS4A4AQ96JQ5 MIR516B1-201ENST00000385211 90 ntBASIC1.81□□□□□ -2.12
MS4A4AQ96JQ5 SNORD116.2-201ENST00000391251 93 ntBASIC1.81□□□□□ -2.12
MS4A4AQ96JQ5 AC244090.1-201ENST00000441884 93 ntBASIC1.81□□□□□ -2.12
MS4A4AQ96JQ5 MIR20A-201ENST00000362279 71 ntBASIC1.8□□□□□ -2.12
MS4A4AQ96JQ5 RNU4-52P-201ENST00000384209 138 ntBASIC1.8□□□□□ -2.12
MS4A4AQ96JQ5 MIR527-201ENST00000385244 85 ntBASIC1.8□□□□□ -2.12
MS4A4AQ96JQ5 SNORD124-201ENST00000459577 104 ntBASIC1.8□□□□□ -2.12
MS4A4AQ96JQ5 MIR4448-201ENST00000584360 86 ntBASIC1.8□□□□□ -2.12
MS4A4AQ96JQ5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
MS4A4AQ96JQ5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.78□□□□□ -2.12
MS4A4AQ96JQ5 MIR429-201ENST00000362106 83 ntBASIC1.78□□□□□ -2.12
MS4A4AQ96JQ5 RNU4-33P-201ENST00000364316 85 ntBASIC1.78□□□□□ -2.12
MS4A4AQ96JQ5 MIR618-201ENST00000385287 98 ntBASIC1.78□□□□□ -2.12
MS4A4AQ96JQ5 RNA5SP364-201ENST00000516938 78 ntBASIC1.78□□□□□ -2.12
MS4A4AQ96JQ5 SNORA36.1-201ENST00000363424 132 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 271 ms