Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 MIR924-201ENST00000638017 53 ntBASIC0.69□□□□□ -2.3
VCPIP1Q96JH7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.68□□□□□ -2.3
VCPIP1Q96JH7 MIR6828-201ENST00000636181 60 ntBASIC0.68□□□□□ -2.3
VCPIP1Q96JH7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
VCPIP1Q96JH7 RNU6-681P-201ENST00000364012 104 ntBASIC0.67□□□□□ -2.3
VCPIP1Q96JH7 RNU6-1296P-201ENST00000383879 107 ntBASIC0.67□□□□□ -2.3
VCPIP1Q96JH7 Y_RNA.606-201ENST00000410579 103 ntBASIC0.67□□□□□ -2.3
VCPIP1Q96JH7 RNA5SP330-201ENST00000517096 96 ntBASIC0.67□□□□□ -2.3
VCPIP1Q96JH7 MIR4460-201ENST00000577862 86 ntBASIC0.67□□□□□ -2.3
VCPIP1Q96JH7 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.67□□□□□ -2.3
VCPIP1Q96JH7 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.67□□□□□ -2.3
VCPIP1Q96JH7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
VCPIP1Q96JH7 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
VCPIP1Q96JH7 RNU6-330P-201ENST00000363015 107 ntBASIC0.66□□□□□ -2.3
VCPIP1Q96JH7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.66□□□□□ -2.3
VCPIP1Q96JH7 RNU1-141P-201ENST00000364623 158 ntBASIC0.66□□□□□ -2.3
VCPIP1Q96JH7 RNU6-382P-201ENST00000365181 106 ntBASIC0.66□□□□□ -2.3
VCPIP1Q96JH7 RNA5SP193-201ENST00000410353 107 ntBASIC0.66□□□□□ -2.3
VCPIP1Q96JH7 AC074348.1-201ENST00000426503 132 ntBASIC0.66□□□□□ -2.3
VCPIP1Q96JH7 MIR4711-201ENST00000578274 70 ntBASIC0.66□□□□□ -2.3
VCPIP1Q96JH7 MIR3134-201ENST00000579433 74 ntBASIC0.66□□□□□ -2.3
VCPIP1Q96JH7 U6.81-201ENST00000612550 106 ntBASIC0.66□□□□□ -2.3
VCPIP1Q96JH7 MIR548O2-201ENST00000616090 70 ntBASIC0.66□□□□□ -2.3
VCPIP1Q96JH7 RNU6-54P-201ENST00000365563 107 ntBASIC0.65□□□□□ -2.31
VCPIP1Q96JH7 RNU6V-201ENST00000384105 107 ntBASIC0.65□□□□□ -2.31
VCPIP1Q96JH7 RNU6-154P-201ENST00000384306 106 ntBASIC0.65□□□□□ -2.31
VCPIP1Q96JH7 SNORA8.2-201ENST00000384372 139 ntBASIC0.65□□□□□ -2.31
VCPIP1Q96JH7 AC093423.1-201ENST00000440817 142 ntBASIC0.65□□□□□ -2.31
VCPIP1Q96JH7 RNA5SP484-201ENST00000458857 111 ntBASIC0.65□□□□□ -2.31
VCPIP1Q96JH7 MIR664A-201ENST00000626086 82 ntBASIC0.65□□□□□ -2.31
VCPIP1Q96JH7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
VCPIP1Q96JH7 SNORA8.1-201ENST00000384250 140 ntBASIC0.64□□□□□ -2.31
VCPIP1Q96JH7 Y_RNA.565-201ENST00000384719 101 ntBASIC0.64□□□□□ -2.31
VCPIP1Q96JH7 MIR140-201ENST00000385282 100 ntBASIC0.64□□□□□ -2.31
VCPIP1Q96JH7 RNU6-70P-201ENST00000516438 60 ntBASIC0.64□□□□□ -2.31
VCPIP1Q96JH7 MIR7107-201ENST00000611489 80 ntBASIC0.64□□□□□ -2.31
VCPIP1Q96JH7 MIR8087-201ENST00000612745 78 ntBASIC0.64□□□□□ -2.31
VCPIP1Q96JH7 AL109933.3-201ENST00000619095 188 ntBASIC0.64□□□□□ -2.31
VCPIP1Q96JH7 AC243829.3-201ENST00000622177 108 ntBASIC0.64□□□□□ -2.31
VCPIP1Q96JH7 AL162376.1-201ENST00000624117 175 ntBASIC0.64□□□□□ -2.31
VCPIP1Q96JH7 RNA5SP517-201ENST00000364724 117 ntBASIC0.63□□□□□ -2.31
VCPIP1Q96JH7 MT-TY-201ENST00000387409 66 ntBASIC0.63□□□□□ -2.31
VCPIP1Q96JH7 RNU6-274P-201ENST00000459566 107 ntBASIC0.63□□□□□ -2.31
VCPIP1Q96JH7 Y_RNA.681-201ENST00000516445 113 ntBASIC0.63□□□□□ -2.31
VCPIP1Q96JH7 RNU5B-6P-201ENST00000516765 68 ntBASIC0.63□□□□□ -2.31
VCPIP1Q96JH7 NAMPTP3-201ENST00000569273 224 ntBASIC0.63□□□□□ -2.31
VCPIP1Q96JH7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
VCPIP1Q96JH7 RNU6-495P-201ENST00000362995 107 ntBASIC0.62□□□□□ -2.31
VCPIP1Q96JH7 SNORD75.2-201ENST00000408784 58 ntBASIC0.62□□□□□ -2.31
VCPIP1Q96JH7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.62□□□□□ -2.31
VCPIP1Q96JH7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.61□□□□□ -2.31
VCPIP1Q96JH7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.61□□□□□ -2.31
VCPIP1Q96JH7 Y_RNA.178-201ENST00000363832 102 ntBASIC0.61□□□□□ -2.31
VCPIP1Q96JH7 RNU6-411P-201ENST00000384451 107 ntBASIC0.61□□□□□ -2.31
VCPIP1Q96JH7 Y_RNA.545-201ENST00000384652 105 ntBASIC0.61□□□□□ -2.31
VCPIP1Q96JH7 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
VCPIP1Q96JH7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
VCPIP1Q96JH7 AL691482.2-201ENST00000457453 84 ntBASIC0.61□□□□□ -2.31
VCPIP1Q96JH7 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
VCPIP1Q96JH7 MIR4752-201ENST00000579672 72 ntBASIC0.61□□□□□ -2.31
VCPIP1Q96JH7 MIR3675-201ENST00000583661 73 ntBASIC0.61□□□□□ -2.31
VCPIP1Q96JH7 AC092634.7-201ENST00000621022 103 ntBASIC0.61□□□□□ -2.31
VCPIP1Q96JH7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
VCPIP1Q96JH7 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
VCPIP1Q96JH7 AC098934.3-201ENST00000430450 190 ntBASIC0.6□□□□□ -2.31
VCPIP1Q96JH7 SNORD42B-201ENST00000458893 67 ntBASIC0.6□□□□□ -2.31
VCPIP1Q96JH7 SNORA25.18-201ENST00000607153 114 ntBASIC0.6□□□□□ -2.31
VCPIP1Q96JH7 MIR330-201ENST00000362196 94 ntBASIC0.59□□□□□ -2.31
VCPIP1Q96JH7 SNORD110-201ENST00000408189 75 ntBASIC0.59□□□□□ -2.31
VCPIP1Q96JH7 AC006210.1-201ENST00000424882 111 ntBASIC0.59□□□□□ -2.31
VCPIP1Q96JH7 AC069271.1-201ENST00000445577 156 ntBASIC0.59□□□□□ -2.31
VCPIP1Q96JH7 RNU7-24P-201ENST00000458867 62 ntBASIC0.59□□□□□ -2.31
VCPIP1Q96JH7 RNU6-229P-201ENST00000516614 102 ntBASIC0.59□□□□□ -2.31
VCPIP1Q96JH7 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
VCPIP1Q96JH7 AC069503.3-201ENST00000618674 145 ntBASIC0.59□□□□□ -2.31
VCPIP1Q96JH7 AC073869.9-201ENST00000641610 120 ntBASIC0.59□□□□□ -2.31
VCPIP1Q96JH7 Y_RNA.68-201ENST00000362881 102 ntBASIC0.58□□□□□ -2.32
VCPIP1Q96JH7 RNA5SP257-201ENST00000363023 116 ntBASIC0.58□□□□□ -2.32
VCPIP1Q96JH7 MIR203A-201ENST00000384836 110 ntBASIC0.58□□□□□ -2.32
VCPIP1Q96JH7 MIR6509-201ENST00000614603 85 ntBASIC0.58□□□□□ -2.32
VCPIP1Q96JH7 MIR5087-201ENST00000635826 76 ntBASIC0.58□□□□□ -2.32
VCPIP1Q96JH7 RNU6-1039P-201ENST00000383931 107 ntBASIC0.57□□□□□ -2.32
VCPIP1Q96JH7 SNORA40.8-201ENST00000411034 126 ntBASIC0.57□□□□□ -2.32
VCPIP1Q96JH7 RNU6-523P-201ENST00000516304 54 ntBASIC0.57□□□□□ -2.32
VCPIP1Q96JH7 RNU6-752P-201ENST00000516376 102 ntBASIC0.57□□□□□ -2.32
VCPIP1Q96JH7 RNU6-1015P-201ENST00000517121 99 ntBASIC0.57□□□□□ -2.32
VCPIP1Q96JH7 SNORA70.25-201ENST00000612741 95 ntBASIC0.57□□□□□ -2.32
VCPIP1Q96JH7 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
VCPIP1Q96JH7 SNORD45.1-201ENST00000363181 77 ntBASIC0.56□□□□□ -2.32
VCPIP1Q96JH7 SNORD118-201ENST00000363593 134 ntBASIC0.56□□□□□ -2.32
VCPIP1Q96JH7 RNA5SP499-201ENST00000363982 119 ntBASIC0.56□□□□□ -2.32
VCPIP1Q96JH7 RNU6-1241P-201ENST00000384536 107 ntBASIC0.56□□□□□ -2.32
VCPIP1Q96JH7 MIR154-201ENST00000385243 84 ntBASIC0.56□□□□□ -2.32
VCPIP1Q96JH7 RNU6-587P-201ENST00000391282 106 ntBASIC0.56□□□□□ -2.32
VCPIP1Q96JH7 MIR1197-201ENST00000408818 88 ntBASIC0.56□□□□□ -2.32
VCPIP1Q96JH7 SNORD71-201ENST00000411292 86 ntBASIC0.56□□□□□ -2.32
VCPIP1Q96JH7 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
VCPIP1Q96JH7 RNU6-687P-201ENST00000516443 89 ntBASIC0.56□□□□□ -2.32
VCPIP1Q96JH7 MIR4473-201ENST00000583731 91 ntBASIC0.56□□□□□ -2.32
VCPIP1Q96JH7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms