Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 MIR29B1-201ENST00000385015 81 ntBASIC2.05□□□□□ -2.08
MS4A3Q96HJ5 RNU6-1262P-201ENST00000516217 96 ntBASIC2.05□□□□□ -2.08
MS4A3Q96HJ5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.05□□□□□ -2.08
MS4A3Q96HJ5 SNORA70.25-201ENST00000612741 95 ntBASIC2.05□□□□□ -2.08
MS4A3Q96HJ5 RNU6-1008P-201ENST00000384160 104 ntBASIC2.04□□□□□ -2.08
MS4A3Q96HJ5 MIR548H4-201ENST00000408689 111 ntBASIC2.04□□□□□ -2.08
MS4A3Q96HJ5 HMGN2P22-201ENST00000427588 175 ntBASIC2.04□□□□□ -2.08
MS4A3Q96HJ5 AC104435.1-201ENST00000483483 166 ntBASIC2.04□□□□□ -2.08
MS4A3Q96HJ5 AC008413.1-201ENST00000511864 177 ntBASIC2.04□□□□□ -2.08
MS4A3Q96HJ5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
MS4A3Q96HJ5 SNORA36.1-201ENST00000363424 132 ntBASIC2.03□□□□□ -2.08
MS4A3Q96HJ5 RNU6-301P-201ENST00000384277 107 ntBASIC2.03□□□□□ -2.08
MS4A3Q96HJ5 RNA5SP338-201ENST00000410495 85 ntBASIC2.03□□□□□ -2.08
MS4A3Q96HJ5 RNA5SP24-201ENST00000516478 95 ntBASIC2.03□□□□□ -2.08
MS4A3Q96HJ5 SNORD114-29-201ENST00000364819 70 ntBASIC2.02□□□□□ -2.09
MS4A3Q96HJ5 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
MS4A3Q96HJ5 SNORA49-201ENST00000386157 136 ntBASIC2.02□□□□□ -2.09
MS4A3Q96HJ5 RNU4-53P-201ENST00000410828 140 ntBASIC2.01□□□□□ -2.09
MS4A3Q96HJ5 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
MS4A3Q96HJ5 RNA5SP233-201ENST00000459153 113 ntBASIC2.01□□□□□ -2.09
MS4A3Q96HJ5 MIR4435-1-201ENST00000582552 80 ntBASIC2.01□□□□□ -2.09
MS4A3Q96HJ5 MIR7107-201ENST00000611489 80 ntBASIC2.01□□□□□ -2.09
MS4A3Q96HJ5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
MS4A3Q96HJ5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.01□□□□□ -2.09
MS4A3Q96HJ5 RNU6-1267P-201ENST00000410747 107 ntBASIC2□□□□□ -2.09
MS4A3Q96HJ5 RNA5SP508-201ENST00000411327 119 ntBASIC2□□□□□ -2.09
MS4A3Q96HJ5 AL354695.1-201ENST00000427935 228 ntBASIC2□□□□□ -2.09
MS4A3Q96HJ5 SNORD53-201ENST00000579969 78 ntBASIC2□□□□□ -2.09
MS4A3Q96HJ5 MIR4513-201ENST00000581077 86 ntBASIC2□□□□□ -2.09
MS4A3Q96HJ5 MIR5706-201ENST00000579841 80 ntBASIC1.99□□□□□ -2.09
MS4A3Q96HJ5 MIR4448-201ENST00000584360 86 ntBASIC1.99□□□□□ -2.09
MS4A3Q96HJ5 MIR5007-201ENST00000583098 95 ntBASIC1.98□□□□□ -2.09
MS4A3Q96HJ5 MIR6766-201ENST00000622641 72 ntBASIC1.98□□□□□ -2.09
MS4A3Q96HJ5 MIRLET7G-201ENST00000362280 84 ntBASIC1.97□□□□□ -2.09
MS4A3Q96HJ5 RNU4-45P-201ENST00000365469 141 ntBASIC1.97□□□□□ -2.09
MS4A3Q96HJ5 RNU6-717P-201ENST00000459076 104 ntBASIC1.97□□□□□ -2.09
MS4A3Q96HJ5 RNU6-502P-201ENST00000362419 108 ntBASIC1.96□□□□□ -2.1
MS4A3Q96HJ5 SNORA25-201ENST00000384384 134 ntBASIC1.96□□□□□ -2.1
MS4A3Q96HJ5 SNORA3.2-201ENST00000408221 125 ntBASIC1.96□□□□□ -2.1
MS4A3Q96HJ5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.96□□□□□ -2.1
MS4A3Q96HJ5 RNU6-782P-201ENST00000516852 104 ntBASIC1.96□□□□□ -2.1
MS4A3Q96HJ5 AL353803.5-201ENST00000599815 141 ntBASIC1.96□□□□□ -2.1
MS4A3Q96HJ5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
MS4A3Q96HJ5 MIR18A-201ENST00000362310 71 ntBASIC1.94□□□□□ -2.1
MS4A3Q96HJ5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
MS4A3Q96HJ5 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
MS4A3Q96HJ5 SNORD57-201ENST00000448188 72 ntBASIC1.94□□□□□ -2.1
MS4A3Q96HJ5 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
MS4A3Q96HJ5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
MS4A3Q96HJ5 MIR4752-201ENST00000579672 72 ntBASIC1.93□□□□□ -2.1
MS4A3Q96HJ5 RNA5SP37-201ENST00000365420 130 ntBASIC1.92□□□□□ -2.1
MS4A3Q96HJ5 AC108676.2-201ENST00000605225 163 ntBASIC1.92□□□□□ -2.1
MS4A3Q96HJ5 MIR6873-201ENST00000622788 63 ntBASIC1.92□□□□□ -2.1
MS4A3Q96HJ5 RNA5SP160-201ENST00000364866 120 ntBASIC1.91□□□□□ -2.1
MS4A3Q96HJ5 RNU6-974P-201ENST00000384099 108 ntBASIC1.91□□□□□ -2.1
MS4A3Q96HJ5 MIR200A-201ENST00000384875 90 ntBASIC1.91□□□□□ -2.1
MS4A3Q96HJ5 RNA5SP489-201ENST00000410986 109 ntBASIC1.91□□□□□ -2.1
MS4A3Q96HJ5 RNU6-133P-201ENST00000383989 107 ntBASIC1.9□□□□□ -2.11
MS4A3Q96HJ5 RNU6-1326P-201ENST00000391262 107 ntBASIC1.9□□□□□ -2.11
MS4A3Q96HJ5 RN7SKP223-201ENST00000410582 62 ntBASIC1.9□□□□□ -2.11
MS4A3Q96HJ5 AL356320.1-201ENST00000429616 163 ntBASIC1.9□□□□□ -2.11
MS4A3Q96HJ5 RNU7-188P-201ENST00000517063 64 ntBASIC1.9□□□□□ -2.11
MS4A3Q96HJ5 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
MS4A3Q96HJ5 uc_338.20-201ENST00000621563 178 ntBASIC1.9□□□□□ -2.11
MS4A3Q96HJ5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
MS4A3Q96HJ5 Y_RNA.321-201ENST00000365149 102 ntBASIC1.89□□□□□ -2.11
MS4A3Q96HJ5 MIR19B1-201ENST00000384829 87 ntBASIC1.89□□□□□ -2.11
MS4A3Q96HJ5 RNA5SP425-201ENST00000410336 112 ntBASIC1.89□□□□□ -2.11
MS4A3Q96HJ5 MIR4432-201ENST00000581823 84 ntBASIC1.89□□□□□ -2.11
MS4A3Q96HJ5 MTRNR2L9-201ENST00000622562 75 ntBASIC1.89□□□□□ -2.11
MS4A3Q96HJ5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MS4A3Q96HJ5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MS4A3Q96HJ5 MIR676-201ENST00000390702 67 ntBASIC1.88□□□□□ -2.11
MS4A3Q96HJ5 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
MS4A3Q96HJ5 MIR1273D-201ENST00000577266 86 ntBASIC1.88□□□□□ -2.11
MS4A3Q96HJ5 RNU1-29P-201ENST00000606574 126 ntBASIC1.88□□□□□ -2.11
MS4A3Q96HJ5 MIR6132-201ENST00000622083 109 ntBASIC1.88□□□□□ -2.11
MS4A3Q96HJ5 SNORA64-201ENST00000384674 134 ntBASIC1.87□□□□□ -2.11
MS4A3Q96HJ5 SNORD63.1-201ENST00000516178 80 ntBASIC1.87□□□□□ -2.11
MS4A3Q96HJ5 RNA5SP200-201ENST00000516360 103 ntBASIC1.87□□□□□ -2.11
MS4A3Q96HJ5 RNU6-175P-201ENST00000516896 107 ntBASIC1.87□□□□□ -2.11
MS4A3Q96HJ5 U7.6-201ENST00000610841 64 ntBASIC1.87□□□□□ -2.11
MS4A3Q96HJ5 Y_RNA.345-201ENST00000365384 92 ntBASIC1.86□□□□□ -2.11
MS4A3Q96HJ5 RNU6-530P-201ENST00000391180 107 ntBASIC1.86□□□□□ -2.11
MS4A3Q96HJ5 SNORA11.2-201ENST00000408318 127 ntBASIC1.86□□□□□ -2.11
MS4A3Q96HJ5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
MS4A3Q96HJ5 SNORD115-23-201ENST00000364461 82 ntBASIC1.85□□□□□ -2.11
MS4A3Q96HJ5 SNORA70B-201ENST00000384210 135 ntBASIC1.85□□□□□ -2.11
MS4A3Q96HJ5 SNORD63.2-201ENST00000516303 64 ntBASIC1.85□□□□□ -2.11
MS4A3Q96HJ5 RN7SL429P-201ENST00000479090 223 ntBASIC1.84□□□□□ -2.11
MS4A3Q96HJ5 RN7SL489P-201ENST00000486185 223 ntBASIC1.84□□□□□ -2.11
MS4A3Q96HJ5 RN7SL327P-201ENST00000488659 223 ntBASIC1.84□□□□□ -2.11
MS4A3Q96HJ5 Y_RNA.698-201ENST00000516798 118 ntBASIC1.84□□□□□ -2.11
MS4A3Q96HJ5 U7.5-201ENST00000517224 61 ntBASIC1.84□□□□□ -2.11
MS4A3Q96HJ5 RN7SL853P-201ENST00000617250 223 ntBASIC1.84□□□□□ -2.11
MS4A3Q96HJ5 MIR4317-201ENST00000637586 65 ntBASIC1.84□□□□□ -2.11
MS4A3Q96HJ5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.84□□□□□ -2.12
MS4A3Q96HJ5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
MS4A3Q96HJ5 RNA5SP327-201ENST00000362494 101 ntBASIC1.83□□□□□ -2.12
MS4A3Q96HJ5 Y_RNA.206-201ENST00000364136 102 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms