Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 Y_RNA.407-201ENST00000383986 113 ntBASIC1.42□□□□□ -2.18
TRIM11Q96F44 Y_RNA.246-201ENST00000364495 108 ntBASIC1.41□□□□□ -2.18
TRIM11Q96F44 MIR573-201ENST00000384964 99 ntBASIC1.41□□□□□ -2.18
TRIM11Q96F44 RNU6-753P-201ENST00000363926 107 ntBASIC1.4□□□□□ -2.19
TRIM11Q96F44 SNORA25-201ENST00000384384 134 ntBASIC1.4□□□□□ -2.19
TRIM11Q96F44 MIR652-201ENST00000385278 98 ntBASIC1.4□□□□□ -2.19
TRIM11Q96F44 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
TRIM11Q96F44 MIR6828-201ENST00000636181 60 ntBASIC1.4□□□□□ -2.19
TRIM11Q96F44 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRIM11Q96F44 SNORA41B-201ENST00000384785 128 ntBASIC1.39□□□□□ -2.19
TRIM11Q96F44 MIR3612-201ENST00000579753 87 ntBASIC1.39□□□□□ -2.19
TRIM11Q96F44 MIR4303-201ENST00000581299 66 ntBASIC1.39□□□□□ -2.19
TRIM11Q96F44 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
TRIM11Q96F44 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
TRIM11Q96F44 AC068338.1-201ENST00000565567 176 ntBASIC1.38□□□□□ -2.19
TRIM11Q96F44 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
TRIM11Q96F44 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.38□□□□□ -2.19
TRIM11Q96F44 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
TRIM11Q96F44 RNU1-17P-201ENST00000363022 152 ntBASIC1.37□□□□□ -2.19
TRIM11Q96F44 Y_RNA.325-201ENST00000365171 122 ntBASIC1.37□□□□□ -2.19
TRIM11Q96F44 MIR618-201ENST00000385287 98 ntBASIC1.37□□□□□ -2.19
TRIM11Q96F44 MIR548E-201ENST00000408287 88 ntBASIC1.37□□□□□ -2.19
TRIM11Q96F44 AL591806.2-201ENST00000433122 173 ntBASIC1.37□□□□□ -2.19
TRIM11Q96F44 RNU6-231P-201ENST00000517122 103 ntBASIC1.37□□□□□ -2.19
TRIM11Q96F44 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.36□□□□□ -2.19
TRIM11Q96F44 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
TRIM11Q96F44 MIR582-201ENST00000365731 98 ntBASIC1.36□□□□□ -2.19
TRIM11Q96F44 RNU6-980P-201ENST00000516925 103 ntBASIC1.36□□□□□ -2.19
TRIM11Q96F44 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
TRIM11Q96F44 MIR19B1-201ENST00000384829 87 ntBASIC1.35□□□□□ -2.19
TRIM11Q96F44 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.35□□□□□ -2.19
TRIM11Q96F44 AC006210.1-201ENST00000424882 111 ntBASIC1.35□□□□□ -2.19
TRIM11Q96F44 MIR548AE1-201ENST00000583292 70 ntBASIC1.35□□□□□ -2.19
TRIM11Q96F44 MIR3660-201ENST00000584845 100 ntBASIC1.35□□□□□ -2.19
TRIM11Q96F44 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.35□□□□□ -2.19
TRIM11Q96F44 MIR7843-201ENST00000622274 79 ntBASIC1.35□□□□□ -2.19
TRIM11Q96F44 AL021921.1-201ENST00000442774 93 ntBASIC1.34□□□□□ -2.19
TRIM11Q96F44 RNA5SP227-201ENST00000516184 113 ntBASIC1.34□□□□□ -2.19
TRIM11Q96F44 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.34□□□□□ -2.19
TRIM11Q96F44 MIR4298-201ENST00000584380 73 ntBASIC1.34□□□□□ -2.19
TRIM11Q96F44 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.34□□□□□ -2.19
TRIM11Q96F44 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.2
TRIM11Q96F44 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.33□□□□□ -2.2
TRIM11Q96F44 SNORA9.1-201ENST00000362412 131 ntBASIC1.33□□□□□ -2.2
TRIM11Q96F44 MIR200A-201ENST00000384875 90 ntBASIC1.33□□□□□ -2.2
TRIM11Q96F44 SNORD110-201ENST00000408189 75 ntBASIC1.33□□□□□ -2.2
TRIM11Q96F44 RNA5SP404-201ENST00000517118 132 ntBASIC1.33□□□□□ -2.2
TRIM11Q96F44 CYP3A54P-201ENST00000566950 75 ntBASIC1.33□□□□□ -2.2
TRIM11Q96F44 MIR4421-201ENST00000578133 69 ntBASIC1.33□□□□□ -2.2
TRIM11Q96F44 MIR4473-201ENST00000583731 91 ntBASIC1.33□□□□□ -2.2
TRIM11Q96F44 SNORD116-16-201ENST00000384533 92 ntBASIC1.32□□□□□ -2.2
TRIM11Q96F44 RNU6-1246P-201ENST00000391064 107 ntBASIC1.32□□□□□ -2.2
TRIM11Q96F44 snoU13.23-201ENST00000458863 104 ntBASIC1.32□□□□□ -2.2
TRIM11Q96F44 AC025627.3-201ENST00000582078 182 ntBASIC1.32□□□□□ -2.2
TRIM11Q96F44 U6.96-201ENST00000636425 70 ntBASIC1.32□□□□□ -2.2
TRIM11Q96F44 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRIM11Q96F44 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.31□□□□□ -2.2
TRIM11Q96F44 Y_RNA.74-201ENST00000362911 99 ntBASIC1.3□□□□□ -2.2
TRIM11Q96F44 MIR764-201ENST00000390811 85 ntBASIC1.3□□□□□ -2.2
TRIM11Q96F44 MIR516B1-201ENST00000385211 90 ntBASIC1.29□□□□□ -2.2
TRIM11Q96F44 SNORD116.2-201ENST00000391251 93 ntBASIC1.29□□□□□ -2.2
TRIM11Q96F44 RNU6-518P-201ENST00000516056 96 ntBASIC1.29□□□□□ -2.2
TRIM11Q96F44 RNA5SP268-201ENST00000516828 124 ntBASIC1.29□□□□□ -2.2
TRIM11Q96F44 SNORA36.1-201ENST00000363424 132 ntBASIC1.28□□□□□ -2.2
TRIM11Q96F44 RNU4-33P-201ENST00000364316 85 ntBASIC1.28□□□□□ -2.2
TRIM11Q96F44 SNORA17.3-201ENST00000391159 129 ntBASIC1.28□□□□□ -2.2
TRIM11Q96F44 SNORD124-201ENST00000459577 104 ntBASIC1.28□□□□□ -2.2
TRIM11Q96F44 MIR7110-201ENST00000612638 86 ntBASIC1.28□□□□□ -2.2
TRIM11Q96F44 MIR18A-201ENST00000362310 71 ntBASIC1.27□□□□□ -2.21
TRIM11Q96F44 RNU1-124P-201ENST00000363861 145 ntBASIC1.27□□□□□ -2.21
TRIM11Q96F44 RNU4-45P-201ENST00000365469 141 ntBASIC1.27□□□□□ -2.21
TRIM11Q96F44 RNU6-35P-201ENST00000384530 107 ntBASIC1.27□□□□□ -2.21
TRIM11Q96F44 RNU4-62P-201ENST00000410125 130 ntBASIC1.27□□□□□ -2.21
TRIM11Q96F44 SNORA40.16-201ENST00000517238 121 ntBASIC1.27□□□□□ -2.21
TRIM11Q96F44 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TRIM11Q96F44 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.26□□□□□ -2.21
TRIM11Q96F44 RNU7-95P-201ENST00000459222 64 ntBASIC1.26□□□□□ -2.21
TRIM11Q96F44 AC243829.6-201ENST00000612652 106 ntBASIC1.26□□□□□ -2.21
TRIM11Q96F44 Y_RNA.282-201ENST00000364793 102 ntBASIC1.25□□□□□ -2.21
TRIM11Q96F44 MIR527-201ENST00000385244 85 ntBASIC1.25□□□□□ -2.21
TRIM11Q96F44 RNU6-930P-201ENST00000390938 100 ntBASIC1.25□□□□□ -2.21
TRIM11Q96F44 OR2A41P-201ENST00000473586 105 ntBASIC1.25□□□□□ -2.21
TRIM11Q96F44 MIR7107-201ENST00000611489 80 ntBASIC1.25□□□□□ -2.21
TRIM11Q96F44 AL353997.5-201ENST00000618886 171 ntBASIC1.25□□□□□ -2.21
TRIM11Q96F44 AC243829.3-201ENST00000622177 108 ntBASIC1.25□□□□□ -2.21
TRIM11Q96F44 AC090617.8-201ENST00000623339 167 ntBASIC1.25□□□□□ -2.21
TRIM11Q96F44 AC244090.1-201ENST00000441884 93 ntBASIC1.24□□□□□ -2.21
TRIM11Q96F44 MIR6715A-201ENST00000615929 79 ntBASIC1.24□□□□□ -2.21
TRIM11Q96F44 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
TRIM11Q96F44 MIR20A-201ENST00000362279 71 ntBASIC1.23□□□□□ -2.21
TRIM11Q96F44 SNORD114-24-201ENST00000365029 72 ntBASIC1.23□□□□□ -2.21
TRIM11Q96F44 MIR519A2-201ENST00000384990 87 ntBASIC1.23□□□□□ -2.21
TRIM11Q96F44 MIR1255B2-201ENST00000408618 67 ntBASIC1.23□□□□□ -2.21
TRIM11Q96F44 RNA5SP255-201ENST00000516370 107 ntBASIC1.23□□□□□ -2.21
TRIM11Q96F44 RNA5SP94-201ENST00000516917 108 ntBASIC1.23□□□□□ -2.21
TRIM11Q96F44 AC011195.1-201ENST00000578177 177 ntBASIC1.23□□□□□ -2.21
TRIM11Q96F44 MIR548X-201ENST00000580069 75 ntBASIC1.23□□□□□ -2.21
TRIM11Q96F44 SNORA70.25-201ENST00000612741 95 ntBASIC1.23□□□□□ -2.21
TRIM11Q96F44 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRIM11Q96F44 SNORA40B-201ENST00000385573 128 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 261.1 ms