Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RNA5SP458-201ENST00000516188 119 ntBASIC1.67□□□□□ -2.14
HPS1Q92902 MIR3678-201ENST00000578455 94 ntBASIC1.67□□□□□ -2.14
HPS1Q92902 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.67□□□□□ -2.14
HPS1Q92902 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HPS1Q92902 AL603825.1-201ENST00000438481 80 ntBASIC1.66□□□□□ -2.14
HPS1Q92902 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
HPS1Q92902 RNA5SP99-201ENST00000364020 114 ntBASIC1.65□□□□□ -2.15
HPS1Q92902 U7.7-201ENST00000459276 60 ntBASIC1.65□□□□□ -2.15
HPS1Q92902 MIR6845-201ENST00000613182 61 ntBASIC1.65□□□□□ -2.15
HPS1Q92902 MIR6828-201ENST00000636181 60 ntBASIC1.65□□□□□ -2.15
HPS1Q92902 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
HPS1Q92902 SNORA40B-201ENST00000385573 128 ntBASIC1.64□□□□□ -2.15
HPS1Q92902 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.64□□□□□ -2.15
HPS1Q92902 RNU6-838P-201ENST00000363399 108 ntBASIC1.63□□□□□ -2.15
HPS1Q92902 SNORA16.1-201ENST00000364597 132 ntBASIC1.63□□□□□ -2.15
HPS1Q92902 Y_RNA.282-201ENST00000364793 102 ntBASIC1.63□□□□□ -2.15
HPS1Q92902 SNORD89-201ENST00000390981 114 ntBASIC1.63□□□□□ -2.15
HPS1Q92902 MIR548AE1-201ENST00000583292 70 ntBASIC1.63□□□□□ -2.15
HPS1Q92902 MIR4419B-201ENST00000577260 68 ntBASIC1.62□□□□□ -2.15
HPS1Q92902 U6.96-201ENST00000636425 70 ntBASIC1.62□□□□□ -2.15
HPS1Q92902 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HPS1Q92902 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.62□□□□□ -2.15
HPS1Q92902 RNU6-518P-201ENST00000516056 96 ntBASIC1.61□□□□□ -2.15
HPS1Q92902 MIR573-201ENST00000384964 99 ntBASIC1.6□□□□□ -2.15
HPS1Q92902 MIR516B1-201ENST00000385211 90 ntBASIC1.6□□□□□ -2.15
HPS1Q92902 MIR527-201ENST00000385244 85 ntBASIC1.6□□□□□ -2.15
HPS1Q92902 FABP5P4-201ENST00000437203 171 ntBASIC1.6□□□□□ -2.15
HPS1Q92902 MIR3612-201ENST00000579753 87 ntBASIC1.59□□□□□ -2.15
HPS1Q92902 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.15
HPS1Q92902 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HPS1Q92902 MIR222-201ENST00000384992 110 ntBASIC1.58□□□□□ -2.16
HPS1Q92902 MIR545-201ENST00000385085 106 ntBASIC1.58□□□□□ -2.16
HPS1Q92902 SNORD110-201ENST00000408189 75 ntBASIC1.58□□□□□ -2.16
HPS1Q92902 AC006210.1-201ENST00000424882 111 ntBASIC1.58□□□□□ -2.16
HPS1Q92902 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.58□□□□□ -2.16
HPS1Q92902 AC243829.3-201ENST00000622177 108 ntBASIC1.58□□□□□ -2.16
HPS1Q92902 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
HPS1Q92902 RNU1-17P-201ENST00000363022 152 ntBASIC1.57□□□□□ -2.16
HPS1Q92902 RNU6-810P-201ENST00000364001 107 ntBASIC1.57□□□□□ -2.16
HPS1Q92902 RNU6-246P-201ENST00000384702 107 ntBASIC1.57□□□□□ -2.16
HPS1Q92902 MIR519A2-201ENST00000384990 87 ntBASIC1.57□□□□□ -2.16
HPS1Q92902 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.57□□□□□ -2.16
HPS1Q92902 MIR4473-201ENST00000583731 91 ntBASIC1.57□□□□□ -2.16
HPS1Q92902 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.57□□□□□ -2.16
HPS1Q92902 AC243829.6-201ENST00000612652 106 ntBASIC1.57□□□□□ -2.16
HPS1Q92902 AC090617.8-201ENST00000623339 167 ntBASIC1.57□□□□□ -2.16
HPS1Q92902 SNORA25-201ENST00000384384 134 ntBASIC1.56□□□□□ -2.16
HPS1Q92902 RNU6-955P-201ENST00000410497 104 ntBASIC1.56□□□□□ -2.16
HPS1Q92902 RNA5SP227-201ENST00000516184 113 ntBASIC1.56□□□□□ -2.16
HPS1Q92902 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
HPS1Q92902 SNORA25.15-201ENST00000516487 89 ntBASIC1.55□□□□□ -2.16
HPS1Q92902 MIR1255B2-201ENST00000408618 67 ntBASIC1.54□□□□□ -2.16
HPS1Q92902 RNU6-172P-201ENST00000411000 93 ntBASIC1.54□□□□□ -2.16
HPS1Q92902 MIR4255-201ENST00000579351 72 ntBASIC1.54□□□□□ -2.16
HPS1Q92902 SNORD1B-201ENST00000363091 84 ntBASIC1.53□□□□□ -2.16
HPS1Q92902 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HPS1Q92902 SNORA67.5-201ENST00000391036 107 ntBASIC1.53□□□□□ -2.16
HPS1Q92902 RNU6-419P-201ENST00000517030 63 ntBASIC1.53□□□□□ -2.16
HPS1Q92902 AC084768.2-201ENST00000622736 221 ntBASIC1.53□□□□□ -2.16
HPS1Q92902 Y_RNA.338-201ENST00000365320 114 ntBASIC1.52□□□□□ -2.17
HPS1Q92902 RNU6-247P-201ENST00000362636 107 ntBASIC1.51□□□□□ -2.17
HPS1Q92902 SNORA36.1-201ENST00000363424 132 ntBASIC1.51□□□□□ -2.17
HPS1Q92902 RNA5SP190-201ENST00000365222 118 ntBASIC1.51□□□□□ -2.17
HPS1Q92902 MIR19B1-201ENST00000384829 87 ntBASIC1.51□□□□□ -2.17
HPS1Q92902 MIR9-3-201ENST00000385084 90 ntBASIC1.51□□□□□ -2.17
HPS1Q92902 AC244090.1-201ENST00000441884 93 ntBASIC1.51□□□□□ -2.17
HPS1Q92902 Y_RNA.676-201ENST00000516393 96 ntBASIC1.51□□□□□ -2.17
HPS1Q92902 MIR4490-201ENST00000582647 84 ntBASIC1.51□□□□□ -2.17
HPS1Q92902 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
HPS1Q92902 RNU7-154P-201ENST00000516194 62 ntBASIC1.5□□□□□ -2.17
HPS1Q92902 MIR4498-201ENST00000577599 66 ntBASIC1.5□□□□□ -2.17
HPS1Q92902 AC025627.3-201ENST00000582078 182 ntBASIC1.5□□□□□ -2.17
HPS1Q92902 MIR20A-201ENST00000362279 71 ntBASIC1.49□□□□□ -2.17
HPS1Q92902 AC108667.1-201ENST00000428618 249 ntBASIC1.49□□□□□ -2.17
HPS1Q92902 RNA5SP268-201ENST00000516828 124 ntBASIC1.49□□□□□ -2.17
HPS1Q92902 MIR429-201ENST00000362106 83 ntBASIC1.48□□□□□ -2.17
HPS1Q92902 RNA5SP327-201ENST00000362494 101 ntBASIC1.48□□□□□ -2.17
HPS1Q92902 MIR200A-201ENST00000384875 90 ntBASIC1.48□□□□□ -2.17
HPS1Q92902 AC003989.2-201ENST00000440224 169 ntBASIC1.48□□□□□ -2.17
HPS1Q92902 SNORD2-201ENST00000459163 69 ntBASIC1.48□□□□□ -2.17
HPS1Q92902 MIR548AG1-201ENST00000579932 66 ntBASIC1.48□□□□□ -2.17
HPS1Q92902 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
HPS1Q92902 MIR378A-201ENST00000362177 66 ntBASIC1.47□□□□□ -2.17
HPS1Q92902 Y_RNA.109-201ENST00000363215 102 ntBASIC1.47□□□□□ -2.17
HPS1Q92902 RNU6-1053P-201ENST00000515930 101 ntBASIC1.47□□□□□ -2.17
HPS1Q92902 snoU13.31-201ENST00000607291 104 ntBASIC1.47□□□□□ -2.17
HPS1Q92902 MIR18A-201ENST00000362310 71 ntBASIC1.46□□□□□ -2.18
HPS1Q92902 RNU4-45P-201ENST00000365469 141 ntBASIC1.46□□□□□ -2.18
HPS1Q92902 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.46□□□□□ -2.18
HPS1Q92902 SNORD13-201ENST00000459299 104 ntBASIC1.46□□□□□ -2.18
HPS1Q92902 MIR7107-201ENST00000611489 80 ntBASIC1.46□□□□□ -2.18
HPS1Q92902 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
HPS1Q92902 SNORD115-25-201ENST00000362619 82 ntBASIC1.45□□□□□ -2.18
HPS1Q92902 Y_RNA.224-201ENST00000364308 111 ntBASIC1.45□□□□□ -2.18
HPS1Q92902 RNU6-337P-201ENST00000391243 106 ntBASIC1.45□□□□□ -2.18
HPS1Q92902 RNA5SP470-201ENST00000516463 106 ntBASIC1.45□□□□□ -2.18
HPS1Q92902 SNORA70.25-201ENST00000612741 95 ntBASIC1.45□□□□□ -2.18
HPS1Q92902 HMGN2P22-201ENST00000427588 175 ntBASIC1.44□□□□□ -2.18
HPS1Q92902 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
HPS1Q92902 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms