Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 RNU6-721P-201ENST00000410155 105 ntBASIC-1.06□□□□□ -2.58
UFD1Q92890 HAR1A.1-201ENST00000459583 118 ntBASIC-1.06□□□□□ -2.58
UFD1Q92890 SNORD22.1-201ENST00000516331 125 ntBASIC-1.06□□□□□ -2.58
UFD1Q92890 RNA5SP476-201ENST00000516613 103 ntBASIC-1.06□□□□□ -2.58
UFD1Q92890 MIR4719-201ENST00000585233 84 ntBASIC-1.06□□□□□ -2.58
UFD1Q92890 snoR1.1-201ENST00000628177 80 ntBASIC-1.06□□□□□ -2.58
UFD1Q92890 RNU6-495P-201ENST00000362995 107 ntBASIC-1.07□□□□□ -2.58
UFD1Q92890 MIR3064-201ENST00000581130 66 ntBASIC-1.07□□□□□ -2.58
UFD1Q92890 RNU6-886P-201ENST00000384319 105 ntBASIC-1.08□□□□□ -2.58
UFD1Q92890 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
UFD1Q92890 RNU6-644P-201ENST00000391155 98 ntBASIC-1.08□□□□□ -2.58
UFD1Q92890 MIR3140-201ENST00000583685 90 ntBASIC-1.08□□□□□ -2.58
UFD1Q92890 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.09□□□□□ -2.58
UFD1Q92890 RNU4-32P-201ENST00000363404 141 ntBASIC-1.09□□□□□ -2.58
UFD1Q92890 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.09□□□□□ -2.58
UFD1Q92890 SNORD114-25-201ENST00000363742 72 ntBASIC-1.09□□□□□ -2.58
UFD1Q92890 SNORA40-201ENST00000388090 126 ntBASIC-1.09□□□□□ -2.58
UFD1Q92890 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.09□□□□□ -2.58
UFD1Q92890 RNA5SP470-201ENST00000516463 106 ntBASIC-1.09□□□□□ -2.58
UFD1Q92890 AC104996.3-201ENST00000590718 94 ntBASIC-1.09□□□□□ -2.58
UFD1Q92890 MIR8068-201ENST00000618032 68 ntBASIC-1.09□□□□□ -2.58
UFD1Q92890 MIR4320-201ENST00000636981 65 ntBASIC-1.09□□□□□ -2.58
UFD1Q92890 AC099654.10-201ENST00000640395 161 ntBASIC-1.09□□□□□ -2.58
UFD1Q92890 MIR409-201ENST00000362237 79 ntBASIC-1.1□□□□□ -2.59
UFD1Q92890 SNORD74.6-201ENST00000364796 70 ntBASIC-1.1□□□□□ -2.59
UFD1Q92890 RNU6-813P-201ENST00000384691 107 ntBASIC-1.1□□□□□ -2.59
UFD1Q92890 MIRLET7B-201ENST00000385140 83 ntBASIC-1.1□□□□□ -2.59
UFD1Q92890 RNU6-592P-201ENST00000411333 103 ntBASIC-1.1□□□□□ -2.59
UFD1Q92890 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.1□□□□□ -2.59
UFD1Q92890 MIR3115-201ENST00000577915 68 ntBASIC-1.1□□□□□ -2.59
UFD1Q92890 MIR378F-201ENST00000578143 78 ntBASIC-1.1□□□□□ -2.59
UFD1Q92890 AC103810.7-201ENST00000607821 91 ntBASIC-1.1□□□□□ -2.59
UFD1Q92890 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.11□□□□□ -2.59
UFD1Q92890 SNORD4B-201ENST00000459083 72 ntBASIC-1.11□□□□□ -2.59
UFD1Q92890 AC022137.1-201ENST00000483735 151 ntBASIC-1.11□□□□□ -2.59
UFD1Q92890 MIR5009-201ENST00000578736 100 ntBASIC-1.11□□□□□ -2.59
UFD1Q92890 RNA5SP192-201ENST00000364404 120 ntBASIC-1.12□□□□□ -2.59
UFD1Q92890 SNORD115-23-201ENST00000364461 82 ntBASIC-1.12□□□□□ -2.59
UFD1Q92890 SNORA24B-201ENST00000384176 131 ntBASIC-1.12□□□□□ -2.59
UFD1Q92890 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.12□□□□□ -2.59
UFD1Q92890 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.12□□□□□ -2.59
UFD1Q92890 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.12□□□□□ -2.59
UFD1Q92890 RNU6-337P-201ENST00000391243 106 ntBASIC-1.12□□□□□ -2.59
UFD1Q92890 AP000533.3-201ENST00000447704 118 ntBASIC-1.12□□□□□ -2.59
UFD1Q92890 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.13□□□□□ -2.59
UFD1Q92890 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.13□□□□□ -2.59
UFD1Q92890 RNA5SP266-201ENST00000410273 108 ntBASIC-1.13□□□□□ -2.59
UFD1Q92890 RNU7-24P-201ENST00000458867 62 ntBASIC-1.13□□□□□ -2.59
UFD1Q92890 RNU7-107P-201ENST00000459121 61 ntBASIC-1.13□□□□□ -2.59
UFD1Q92890 RNU6-990P-201ENST00000364385 104 ntBASIC-1.14□□□□□ -2.59
UFD1Q92890 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.14□□□□□ -2.59
UFD1Q92890 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.14□□□□□ -2.59
UFD1Q92890 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.14□□□□□ -2.59
UFD1Q92890 MIR517B-201ENST00000385102 67 ntBASIC-1.14□□□□□ -2.59
UFD1Q92890 SNORD75.2-201ENST00000408784 58 ntBASIC-1.14□□□□□ -2.59
UFD1Q92890 RNU6-257P-201ENST00000410238 98 ntBASIC-1.14□□□□□ -2.59
UFD1Q92890 RNU6-519P-201ENST00000410590 108 ntBASIC-1.14□□□□□ -2.59
UFD1Q92890 AL500527.2-201ENST00000454105 95 ntBASIC-1.14□□□□□ -2.59
UFD1Q92890 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.14□□□□□ -2.59
UFD1Q92890 MIR548Z-201ENST00000584743 97 ntBASIC-1.14□□□□□ -2.59
UFD1Q92890 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.15□□□□□ -2.59
UFD1Q92890 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.15□□□□□ -2.59
UFD1Q92890 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.15□□□□□ -2.59
UFD1Q92890 AC021146.9-201ENST00000512503 156 ntBASIC-1.15□□□□□ -2.59
UFD1Q92890 RNU7-200P-201ENST00000516105 62 ntBASIC-1.15□□□□□ -2.59
UFD1Q92890 RNU6-62P-201ENST00000516526 102 ntBASIC-1.15□□□□□ -2.59
UFD1Q92890 MIR4499-201ENST00000584834 69 ntBASIC-1.15□□□□□ -2.59
UFD1Q92890 uc_338.19-201ENST00000616808 99 ntBASIC-1.15□□□□□ -2.59
UFD1Q92890 RNU6-905P-201ENST00000384434 107 ntBASIC-1.16□□□□□ -2.6
UFD1Q92890 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.16□□□□□ -2.6
UFD1Q92890 MIR3914-2-201ENST00000637339 95 ntBASIC-1.16□□□□□ -2.6
UFD1Q92890 MIR548A1-201ENST00000385041 97 ntBASIC-1.17□□□□□ -2.6
UFD1Q92890 RNA5SP292-201ENST00000390974 118 ntBASIC-1.17□□□□□ -2.6
UFD1Q92890 RNU6-274P-201ENST00000459566 107 ntBASIC-1.17□□□□□ -2.6
UFD1Q92890 MIR4306-201ENST00000583390 91 ntBASIC-1.18□□□□□ -2.6
UFD1Q92890 MIR4777-201ENST00000583710 86 ntBASIC-1.18□□□□□ -2.6
UFD1Q92890 U6.96-201ENST00000636425 70 ntBASIC-1.18□□□□□ -2.6
UFD1Q92890 SNORD33.1-201ENST00000516213 88 ntBASIC-1.19□□□□□ -2.6
UFD1Q92890 MIR3165-201ENST00000579874 75 ntBASIC-1.19□□□□□ -2.6
UFD1Q92890 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.19□□□□□ -2.6
UFD1Q92890 SNORA62.4-201ENST00000365504 151 ntBASIC-1.2□□□□□ -2.6
UFD1Q92890 MTATP6P29-201ENST00000415057 132 ntBASIC-1.2□□□□□ -2.6
UFD1Q92890 RNU6-971P-201ENST00000516920 106 ntBASIC-1.2□□□□□ -2.6
UFD1Q92890 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.2□□□□□ -2.6
UFD1Q92890 YWHAEP3-201ENST00000582767 121 ntBASIC-1.2□□□□□ -2.6
UFD1Q92890 MIR548A3-201ENST00000385297 97 ntBASIC-1.21□□□□□ -2.6
UFD1Q92890 SNORD90-201ENST00000391145 111 ntBASIC-1.21□□□□□ -2.6
UFD1Q92890 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.21□□□□□ -2.6
UFD1Q92890 SNORD18.2-201ENST00000459604 70 ntBASIC-1.21□□□□□ -2.6
UFD1Q92890 RNU6-795P-201ENST00000516323 103 ntBASIC-1.21□□□□□ -2.6
UFD1Q92890 SNORA18.5-201ENST00000516616 101 ntBASIC-1.21□□□□□ -2.6
UFD1Q92890 AC140658.3-201ENST00000567603 271 ntBASIC-1.21□□□□□ -2.6
UFD1Q92890 AC006254.2-201ENST00000603259 279 ntBASIC-1.21□□□□□ -2.6
UFD1Q92890 U6.95-201ENST00000636931 70 ntBASIC-1.21□□□□□ -2.6
UFD1Q92890 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.22□□□□□ -2.6
UFD1Q92890 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.22□□□□□ -2.6
UFD1Q92890 RNA5SP461-201ENST00000516451 104 ntBASIC-1.22□□□□□ -2.6
UFD1Q92890 AC012531.4-201ENST00000616509 177 ntBASIC-1.22□□□□□ -2.6
UFD1Q92890 RNU6-382P-201ENST00000365181 106 ntBASIC-1.23□□□□□ -2.61
UFD1Q92890 RNU6-80P-201ENST00000384195 107 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms