Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 RNU6-1246P-201ENST00000391064 107 ntBASIC1.74□□□□□ -2.13
SNIP1Q8TAD8 AC008834.1-201ENST00000511612 175 ntBASIC1.74□□□□□ -2.13
SNIP1Q8TAD8 SCARNA17.3-201ENST00000516381 125 ntBASIC1.74□□□□□ -2.13
SNIP1Q8TAD8 MIR4303-201ENST00000581299 66 ntBASIC1.74□□□□□ -2.13
SNIP1Q8TAD8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
SNIP1Q8TAD8 Y_RNA.224-201ENST00000364308 111 ntBASIC1.73□□□□□ -2.13
SNIP1Q8TAD8 RNU6-930P-201ENST00000390938 100 ntBASIC1.73□□□□□ -2.13
SNIP1Q8TAD8 SNORD116.2-201ENST00000391251 93 ntBASIC1.73□□□□□ -2.13
SNIP1Q8TAD8 MIR3122-201ENST00000577243 73 ntBASIC1.73□□□□□ -2.13
SNIP1Q8TAD8 BX248123.2-201ENST00000606318 124 ntBASIC1.73□□□□□ -2.13
SNIP1Q8TAD8 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
SNIP1Q8TAD8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.73□□□□□ -2.13
SNIP1Q8TAD8 SNORA25.8-201ENST00000364831 128 ntBASIC1.72□□□□□ -2.13
SNIP1Q8TAD8 SNORD89-201ENST00000390981 114 ntBASIC1.72□□□□□ -2.13
SNIP1Q8TAD8 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.72□□□□□ -2.13
SNIP1Q8TAD8 RNU7-95P-201ENST00000459222 64 ntBASIC1.72□□□□□ -2.13
SNIP1Q8TAD8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.72□□□□□ -2.13
SNIP1Q8TAD8 MIR3678-201ENST00000578455 94 ntBASIC1.72□□□□□ -2.13
SNIP1Q8TAD8 MIR8081-201ENST00000611533 95 ntBASIC1.72□□□□□ -2.13
SNIP1Q8TAD8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
SNIP1Q8TAD8 MIR582-201ENST00000365731 98 ntBASIC1.71□□□□□ -2.14
SNIP1Q8TAD8 Y_RNA.407-201ENST00000383986 113 ntBASIC1.71□□□□□ -2.14
SNIP1Q8TAD8 MIR517C-201ENST00000385103 95 ntBASIC1.71□□□□□ -2.14
SNIP1Q8TAD8 AC002429.1-201ENST00000437672 148 ntBASIC1.71□□□□□ -2.14
SNIP1Q8TAD8 RNU1-92P-201ENST00000517017 135 ntBASIC1.71□□□□□ -2.14
SNIP1Q8TAD8 AC012493.3-201ENST00000604494 112 ntBASIC1.71□□□□□ -2.14
SNIP1Q8TAD8 RNU6-392P-201ENST00000364926 101 ntBASIC1.7□□□□□ -2.14
SNIP1Q8TAD8 SNORD12-201ENST00000391002 90 ntBASIC1.7□□□□□ -2.14
SNIP1Q8TAD8 MIR1276-201ENST00000408707 83 ntBASIC1.7□□□□□ -2.14
SNIP1Q8TAD8 SNORA40.16-201ENST00000517238 121 ntBASIC1.7□□□□□ -2.14
SNIP1Q8TAD8 SNORD105-201ENST00000386910 85 ntBASIC1.69□□□□□ -2.14
SNIP1Q8TAD8 RNA5SP338-201ENST00000410495 85 ntBASIC1.69□□□□□ -2.14
SNIP1Q8TAD8 CYP3A54P-201ENST00000566950 75 ntBASIC1.69□□□□□ -2.14
SNIP1Q8TAD8 MIR6504-201ENST00000613520 61 ntBASIC1.69□□□□□ -2.14
SNIP1Q8TAD8 MIR548E-201ENST00000408287 88 ntBASIC1.68□□□□□ -2.14
SNIP1Q8TAD8 U7.7-201ENST00000459276 60 ntBASIC1.68□□□□□ -2.14
SNIP1Q8TAD8 RNU6-1110P-201ENST00000516462 101 ntBASIC1.68□□□□□ -2.14
SNIP1Q8TAD8 SCARNA16.5-201ENST00000517114 183 ntBASIC1.68□□□□□ -2.14
SNIP1Q8TAD8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.68□□□□□ -2.14
SNIP1Q8TAD8 MIR548AE1-201ENST00000583292 70 ntBASIC1.68□□□□□ -2.14
SNIP1Q8TAD8 AL162376.1-201ENST00000624117 175 ntBASIC1.68□□□□□ -2.14
SNIP1Q8TAD8 RNA5SP160-201ENST00000364866 120 ntBASIC1.67□□□□□ -2.14
SNIP1Q8TAD8 Y_RNA.327-201ENST00000365201 102 ntBASIC1.67□□□□□ -2.14
SNIP1Q8TAD8 MIR222-201ENST00000384992 110 ntBASIC1.67□□□□□ -2.14
SNIP1Q8TAD8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.67□□□□□ -2.14
SNIP1Q8TAD8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SNIP1Q8TAD8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SNIP1Q8TAD8 SNORD116-16-201ENST00000384533 92 ntBASIC1.66□□□□□ -2.14
SNIP1Q8TAD8 MIR7110-201ENST00000612638 86 ntBASIC1.66□□□□□ -2.14
SNIP1Q8TAD8 U6.96-201ENST00000636425 70 ntBASIC1.66□□□□□ -2.14
SNIP1Q8TAD8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SNIP1Q8TAD8 Y_RNA.74-201ENST00000362911 99 ntBASIC1.65□□□□□ -2.15
SNIP1Q8TAD8 MIR548F3-201ENST00000408509 87 ntBASIC1.65□□□□□ -2.15
SNIP1Q8TAD8 MIR548X-201ENST00000580069 75 ntBASIC1.65□□□□□ -2.15
SNIP1Q8TAD8 MIR4473-201ENST00000583731 91 ntBASIC1.65□□□□□ -2.15
SNIP1Q8TAD8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
SNIP1Q8TAD8 Y_RNA.540-201ENST00000384638 111 ntBASIC1.64□□□□□ -2.15
SNIP1Q8TAD8 AL021921.1-201ENST00000442774 93 ntBASIC1.64□□□□□ -2.15
SNIP1Q8TAD8 RNU6-518P-201ENST00000516056 96 ntBASIC1.64□□□□□ -2.15
SNIP1Q8TAD8 MIR3612-201ENST00000579753 87 ntBASIC1.64□□□□□ -2.15
SNIP1Q8TAD8 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SNIP1Q8TAD8 SNORD53B-201ENST00000577887 78 ntBASIC1.63□□□□□ -2.15
SNIP1Q8TAD8 AC090617.8-201ENST00000623339 167 ntBASIC1.63□□□□□ -2.15
SNIP1Q8TAD8 Y_RNA.282-201ENST00000364793 102 ntBASIC1.62□□□□□ -2.15
SNIP1Q8TAD8 MIR527-201ENST00000385244 85 ntBASIC1.62□□□□□ -2.15
SNIP1Q8TAD8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.62□□□□□ -2.15
SNIP1Q8TAD8 SNORA16.1-201ENST00000364597 132 ntBASIC1.61□□□□□ -2.15
SNIP1Q8TAD8 MIR573-201ENST00000384964 99 ntBASIC1.61□□□□□ -2.15
SNIP1Q8TAD8 MIR516B1-201ENST00000385211 90 ntBASIC1.61□□□□□ -2.15
SNIP1Q8TAD8 AC006210.1-201ENST00000424882 111 ntBASIC1.61□□□□□ -2.15
SNIP1Q8TAD8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.61□□□□□ -2.15
SNIP1Q8TAD8 MIR6828-201ENST00000636181 60 ntBASIC1.61□□□□□ -2.15
SNIP1Q8TAD8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SNIP1Q8TAD8 SNORD110-201ENST00000408189 75 ntBASIC1.6□□□□□ -2.15
SNIP1Q8TAD8 FABP5P4-201ENST00000437203 171 ntBASIC1.6□□□□□ -2.15
SNIP1Q8TAD8 RNA5SP227-201ENST00000516184 113 ntBASIC1.6□□□□□ -2.15
SNIP1Q8TAD8 MIR4285-201ENST00000581001 85 ntBASIC1.6□□□□□ -2.15
SNIP1Q8TAD8 RNU6-810P-201ENST00000364001 107 ntBASIC1.59□□□□□ -2.15
SNIP1Q8TAD8 SNORA25-201ENST00000384384 134 ntBASIC1.58□□□□□ -2.16
SNIP1Q8TAD8 MIR519A2-201ENST00000384990 87 ntBASIC1.58□□□□□ -2.16
SNIP1Q8TAD8 SNORA40B-201ENST00000385573 128 ntBASIC1.58□□□□□ -2.16
SNIP1Q8TAD8 MIR1255B2-201ENST00000408618 67 ntBASIC1.58□□□□□ -2.16
SNIP1Q8TAD8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.58□□□□□ -2.16
SNIP1Q8TAD8 AC243829.6-201ENST00000612652 106 ntBASIC1.58□□□□□ -2.16
SNIP1Q8TAD8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.58□□□□□ -2.16
SNIP1Q8TAD8 MIR4452-201ENST00000583004 71 ntBASIC1.57□□□□□ -2.16
SNIP1Q8TAD8 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
SNIP1Q8TAD8 RNU6-42P-201ENST00000384165 107 ntBASIC1.56□□□□□ -2.16
SNIP1Q8TAD8 MIR545-201ENST00000385085 106 ntBASIC1.56□□□□□ -2.16
SNIP1Q8TAD8 RNA5SP327-201ENST00000362494 101 ntBASIC1.55□□□□□ -2.16
SNIP1Q8TAD8 RNU1-42P-201ENST00000364033 160 ntBASIC1.55□□□□□ -2.16
SNIP1Q8TAD8 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
SNIP1Q8TAD8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.55□□□□□ -2.16
SNIP1Q8TAD8 MIR4419B-201ENST00000577260 68 ntBASIC1.55□□□□□ -2.16
SNIP1Q8TAD8 SNORA36.1-201ENST00000363424 132 ntBASIC1.54□□□□□ -2.16
SNIP1Q8TAD8 RNU6-172P-201ENST00000411000 93 ntBASIC1.54□□□□□ -2.16
SNIP1Q8TAD8 RNA5SP480-201ENST00000516840 109 ntBASIC1.54□□□□□ -2.16
SNIP1Q8TAD8 RNA5SP102-201ENST00000516865 106 ntBASIC1.54□□□□□ -2.16
SNIP1Q8TAD8 AC243829.3-201ENST00000622177 108 ntBASIC1.54□□□□□ -2.16
SNIP1Q8TAD8 SNORD1B-201ENST00000363091 84 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms