Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
SHCBP1Q8NEM2 RNU6-330P-201ENST00000363015 107 ntBASIC0.84□□□□□ -2.27
SHCBP1Q8NEM2 RNU6-382P-201ENST00000365181 106 ntBASIC0.84□□□□□ -2.27
SHCBP1Q8NEM2 MIR508-201ENST00000384857 115 ntBASIC0.84□□□□□ -2.27
SHCBP1Q8NEM2 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
SHCBP1Q8NEM2 MIR936-201ENST00000401264 98 ntBASIC0.84□□□□□ -2.27
SHCBP1Q8NEM2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.84□□□□□ -2.27
SHCBP1Q8NEM2 MIR7107-201ENST00000611489 80 ntBASIC0.84□□□□□ -2.27
SHCBP1Q8NEM2 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.84□□□□□ -2.27
SHCBP1Q8NEM2 AC010487.4-201ENST00000637027 61 ntBASIC0.84□□□□□ -2.27
SHCBP1Q8NEM2 RNU6-681P-201ENST00000364012 104 ntBASIC0.83□□□□□ -2.28
SHCBP1Q8NEM2 RNU1-141P-201ENST00000364623 158 ntBASIC0.83□□□□□ -2.28
SHCBP1Q8NEM2 RNU6-54P-201ENST00000365563 107 ntBASIC0.83□□□□□ -2.28
SHCBP1Q8NEM2 SNORA36.2-201ENST00000384004 127 ntBASIC0.83□□□□□ -2.28
SHCBP1Q8NEM2 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
SHCBP1Q8NEM2 MIR4773-1-201ENST00000637203 78 ntBASIC0.83□□□□□ -2.28
SHCBP1Q8NEM2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
SHCBP1Q8NEM2 Y_RNA.115-201ENST00000363272 98 ntBASIC0.82□□□□□ -2.28
SHCBP1Q8NEM2 RNU6V-201ENST00000384105 107 ntBASIC0.82□□□□□ -2.28
SHCBP1Q8NEM2 SNORA8.2-201ENST00000384372 139 ntBASIC0.82□□□□□ -2.28
SHCBP1Q8NEM2 MT-TY-201ENST00000387409 66 ntBASIC0.82□□□□□ -2.28
SHCBP1Q8NEM2 RNA5SP484-201ENST00000458857 111 ntBASIC0.82□□□□□ -2.28
SHCBP1Q8NEM2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SHCBP1Q8NEM2 MIR664A-201ENST00000626086 82 ntBASIC0.82□□□□□ -2.28
SHCBP1Q8NEM2 RNU6-495P-201ENST00000362995 107 ntBASIC0.81□□□□□ -2.28
SHCBP1Q8NEM2 Y_RNA.565-201ENST00000384719 101 ntBASIC0.81□□□□□ -2.28
SHCBP1Q8NEM2 SNORD75.2-201ENST00000408784 58 ntBASIC0.81□□□□□ -2.28
SHCBP1Q8NEM2 RNU6-523P-201ENST00000516304 54 ntBASIC0.81□□□□□ -2.28
SHCBP1Q8NEM2 MIR4460-201ENST00000577862 86 ntBASIC0.81□□□□□ -2.28
SHCBP1Q8NEM2 Y_RNA.68-201ENST00000362881 102 ntBASIC0.8□□□□□ -2.28
SHCBP1Q8NEM2 SNORA8.1-201ENST00000384250 140 ntBASIC0.8□□□□□ -2.28
SHCBP1Q8NEM2 MIR140-201ENST00000385282 100 ntBASIC0.8□□□□□ -2.28
SHCBP1Q8NEM2 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
SHCBP1Q8NEM2 RNU6-70P-201ENST00000516438 60 ntBASIC0.8□□□□□ -2.28
SHCBP1Q8NEM2 NAMPTP3-201ENST00000569273 224 ntBASIC0.8□□□□□ -2.28
SHCBP1Q8NEM2 RNA5SP517-201ENST00000364724 117 ntBASIC0.79□□□□□ -2.28
SHCBP1Q8NEM2 RNU7-24P-201ENST00000458867 62 ntBASIC0.79□□□□□ -2.28
SHCBP1Q8NEM2 RNU6-274P-201ENST00000459566 107 ntBASIC0.79□□□□□ -2.28
SHCBP1Q8NEM2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.79□□□□□ -2.28
SHCBP1Q8NEM2 Y_RNA.681-201ENST00000516445 113 ntBASIC0.79□□□□□ -2.28
SHCBP1Q8NEM2 RNU6-411P-201ENST00000384451 107 ntBASIC0.78□□□□□ -2.28
SHCBP1Q8NEM2 RNU6-110P-201ENST00000384508 104 ntBASIC0.78□□□□□ -2.28
SHCBP1Q8NEM2 Y_RNA.545-201ENST00000384652 105 ntBASIC0.78□□□□□ -2.28
SHCBP1Q8NEM2 SNORD42B-201ENST00000458893 67 ntBASIC0.78□□□□□ -2.28
SHCBP1Q8NEM2 RNU5B-6P-201ENST00000516765 68 ntBASIC0.77□□□□□ -2.29
SHCBP1Q8NEM2 RNA5SP347-201ENST00000362445 119 ntBASIC0.76□□□□□ -2.29
SHCBP1Q8NEM2 RNU6-1015P-201ENST00000517121 99 ntBASIC0.76□□□□□ -2.29
SHCBP1Q8NEM2 MIR3675-201ENST00000583661 73 ntBASIC0.76□□□□□ -2.29
SHCBP1Q8NEM2 SNORA25.18-201ENST00000607153 114 ntBASIC0.76□□□□□ -2.29
SHCBP1Q8NEM2 AC069503.3-201ENST00000618674 145 ntBASIC0.76□□□□□ -2.29
SHCBP1Q8NEM2 AC092634.7-201ENST00000621022 103 ntBASIC0.76□□□□□ -2.29
SHCBP1Q8NEM2 AC073869.9-201ENST00000641610 120 ntBASIC0.76□□□□□ -2.29
SHCBP1Q8NEM2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
SHCBP1Q8NEM2 RNU6-752P-201ENST00000516376 102 ntBASIC0.75□□□□□ -2.29
SHCBP1Q8NEM2 RNU6-687P-201ENST00000516443 89 ntBASIC0.75□□□□□ -2.29
SHCBP1Q8NEM2 MIR4752-201ENST00000579672 72 ntBASIC0.75□□□□□ -2.29
SHCBP1Q8NEM2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
SHCBP1Q8NEM2 RNA5SP193-201ENST00000410353 107 ntBASIC0.74□□□□□ -2.29
SHCBP1Q8NEM2 AL691482.2-201ENST00000457453 84 ntBASIC0.74□□□□□ -2.29
SHCBP1Q8NEM2 AC018659.1-201ENST00000551083 169 ntBASIC0.74□□□□□ -2.29
SHCBP1Q8NEM2 MIR4711-201ENST00000578274 70 ntBASIC0.74□□□□□ -2.29
SHCBP1Q8NEM2 SNORA70.25-201ENST00000612741 95 ntBASIC0.74□□□□□ -2.29
SHCBP1Q8NEM2 MIR8087-201ENST00000612745 78 ntBASIC0.74□□□□□ -2.29
SHCBP1Q8NEM2 RNU6-1039P-201ENST00000383931 107 ntBASIC0.73□□□□□ -2.29
SHCBP1Q8NEM2 RNU6-1241P-201ENST00000384536 107 ntBASIC0.73□□□□□ -2.29
SHCBP1Q8NEM2 RNU6-587P-201ENST00000391282 106 ntBASIC0.73□□□□□ -2.29
SHCBP1Q8NEM2 AC006210.1-201ENST00000424882 111 ntBASIC0.73□□□□□ -2.29
SHCBP1Q8NEM2 RNU1-29P-201ENST00000606574 126 ntBASIC0.73□□□□□ -2.29
SHCBP1Q8NEM2 AL109933.3-201ENST00000619095 188 ntBASIC0.73□□□□□ -2.29
SHCBP1Q8NEM2 SNORD118-201ENST00000363593 134 ntBASIC0.72□□□□□ -2.29
SHCBP1Q8NEM2 Y_RNA.433-201ENST00000384089 102 ntBASIC0.72□□□□□ -2.29
SHCBP1Q8NEM2 SNORD110-201ENST00000408189 75 ntBASIC0.72□□□□□ -2.29
SHCBP1Q8NEM2 AC069271.1-201ENST00000445577 156 ntBASIC0.72□□□□□ -2.29
SHCBP1Q8NEM2 RNA5SP330-201ENST00000517096 96 ntBASIC0.72□□□□□ -2.29
SHCBP1Q8NEM2 RNA5SP257-201ENST00000363023 116 ntBASIC0.71□□□□□ -2.3
SHCBP1Q8NEM2 SNORA40.8-201ENST00000411034 126 ntBASIC0.71□□□□□ -2.3
SHCBP1Q8NEM2 MIR6509-201ENST00000614603 85 ntBASIC0.71□□□□□ -2.3
SHCBP1Q8NEM2 MIR5087-201ENST00000635826 76 ntBASIC0.71□□□□□ -2.3
SHCBP1Q8NEM2 MIR203A-201ENST00000384836 110 ntBASIC0.7□□□□□ -2.3
SHCBP1Q8NEM2 RNU4-54P-201ENST00000516428 129 ntBASIC0.7□□□□□ -2.3
SHCBP1Q8NEM2 AC243829.3-201ENST00000622177 108 ntBASIC0.7□□□□□ -2.3
SHCBP1Q8NEM2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.7□□□□□ -2.3
SHCBP1Q8NEM2 MIR330-201ENST00000362196 94 ntBASIC0.69□□□□□ -2.3
SHCBP1Q8NEM2 SNORD45.1-201ENST00000363181 77 ntBASIC0.69□□□□□ -2.3
SHCBP1Q8NEM2 MIR518A1-201ENST00000385068 85 ntBASIC0.69□□□□□ -2.3
SHCBP1Q8NEM2 MIR154-201ENST00000385243 84 ntBASIC0.69□□□□□ -2.3
SHCBP1Q8NEM2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
SHCBP1Q8NEM2 AC073261.1-201ENST00000429409 121 ntBASIC0.69□□□□□ -2.3
SHCBP1Q8NEM2 RNU6-634P-201ENST00000459134 106 ntBASIC0.69□□□□□ -2.3
SHCBP1Q8NEM2 MIR4473-201ENST00000583731 91 ntBASIC0.69□□□□□ -2.3
SHCBP1Q8NEM2 RNU6-990P-201ENST00000364385 104 ntBASIC0.68□□□□□ -2.3
SHCBP1Q8NEM2 AC098934.3-201ENST00000430450 190 ntBASIC0.68□□□□□ -2.3
SHCBP1Q8NEM2 MIR548AE1-201ENST00000583292 70 ntBASIC0.68□□□□□ -2.3
SHCBP1Q8NEM2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.68□□□□□ -2.3
SHCBP1Q8NEM2 RNA5SP62-201ENST00000363457 110 ntBASIC0.67□□□□□ -2.3
SHCBP1Q8NEM2 RNA5SP499-201ENST00000363982 119 ntBASIC0.67□□□□□ -2.3
SHCBP1Q8NEM2 SNORD115-31-201ENST00000365318 82 ntBASIC0.67□□□□□ -2.3
SHCBP1Q8NEM2 RNU6-604P-201ENST00000390917 100 ntBASIC0.67□□□□□ -2.3
SHCBP1Q8NEM2 SNORD71-201ENST00000411292 86 ntBASIC0.67□□□□□ -2.3
SHCBP1Q8NEM2 SNORA40.17-201ENST00000517256 115 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms