Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 U7.4-201ENST00000614961 63 ntBASIC0.78□□□□□ -2.28
SLC44A3Q8N4M1 RNA5SP62-201ENST00000363457 110 ntBASIC0.77□□□□□ -2.29
SLC44A3Q8N4M1 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
SLC44A3Q8N4M1 SNORA8.2-201ENST00000384372 139 ntBASIC0.77□□□□□ -2.29
SLC44A3Q8N4M1 MIR608-201ENST00000384820 100 ntBASIC0.77□□□□□ -2.29
SLC44A3Q8N4M1 RNA5SP222-201ENST00000411039 105 ntBASIC0.77□□□□□ -2.29
SLC44A3Q8N4M1 RNA5SP268-201ENST00000516828 124 ntBASIC0.77□□□□□ -2.29
SLC44A3Q8N4M1 MIR3134-201ENST00000579433 74 ntBASIC0.77□□□□□ -2.29
SLC44A3Q8N4M1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
SLC44A3Q8N4M1 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.77□□□□□ -2.29
SLC44A3Q8N4M1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.77□□□□□ -2.29
SLC44A3Q8N4M1 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
SLC44A3Q8N4M1 RNU6-495P-201ENST00000362995 107 ntBASIC0.76□□□□□ -2.29
SLC44A3Q8N4M1 RNU6-330P-201ENST00000363015 107 ntBASIC0.76□□□□□ -2.29
SLC44A3Q8N4M1 RNU1-141P-201ENST00000364623 158 ntBASIC0.76□□□□□ -2.29
SLC44A3Q8N4M1 RNU6-382P-201ENST00000365181 106 ntBASIC0.76□□□□□ -2.29
SLC44A3Q8N4M1 Y_RNA.371-201ENST00000365591 113 ntBASIC0.76□□□□□ -2.29
SLC44A3Q8N4M1 MT-TY-201ENST00000387409 66 ntBASIC0.76□□□□□ -2.29
SLC44A3Q8N4M1 MIR548L-201ENST00000408303 86 ntBASIC0.76□□□□□ -2.29
SLC44A3Q8N4M1 RNA5SP193-201ENST00000410353 107 ntBASIC0.76□□□□□ -2.29
SLC44A3Q8N4M1 RNU7-24P-201ENST00000458867 62 ntBASIC0.76□□□□□ -2.29
SLC44A3Q8N4M1 ACA64.5-201ENST00000516207 127 ntBASIC0.76□□□□□ -2.29
SLC44A3Q8N4M1 RNU6-807P-201ENST00000516805 107 ntBASIC0.76□□□□□ -2.29
SLC44A3Q8N4M1 RNU6-54P-201ENST00000365563 107 ntBASIC0.75□□□□□ -2.29
SLC44A3Q8N4M1 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
SLC44A3Q8N4M1 SNORD75.2-201ENST00000408784 58 ntBASIC0.75□□□□□ -2.29
SLC44A3Q8N4M1 RNA5SP484-201ENST00000458857 111 ntBASIC0.75□□□□□ -2.29
SLC44A3Q8N4M1 RNA5SP227-201ENST00000516184 113 ntBASIC0.75□□□□□ -2.29
SLC44A3Q8N4M1 MIR330-201ENST00000362196 94 ntBASIC0.74□□□□□ -2.29
SLC44A3Q8N4M1 MIR140-201ENST00000385282 100 ntBASIC0.74□□□□□ -2.29
SLC44A3Q8N4M1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.74□□□□□ -2.29
SLC44A3Q8N4M1 MIR4711-201ENST00000578274 70 ntBASIC0.74□□□□□ -2.29
SLC44A3Q8N4M1 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.74□□□□□ -2.29
SLC44A3Q8N4M1 RNA5SP517-201ENST00000364724 117 ntBASIC0.73□□□□□ -2.29
SLC44A3Q8N4M1 RNU6V-201ENST00000384105 107 ntBASIC0.73□□□□□ -2.29
SLC44A3Q8N4M1 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
SLC44A3Q8N4M1 RNU1-29P-201ENST00000606574 126 ntBASIC0.73□□□□□ -2.29
SLC44A3Q8N4M1 MIR664A-201ENST00000626086 82 ntBASIC0.73□□□□□ -2.29
SLC44A3Q8N4M1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SLC44A3Q8N4M1 RNU6-681P-201ENST00000364012 104 ntBASIC0.72□□□□□ -2.29
SLC44A3Q8N4M1 SNORA8.1-201ENST00000384250 140 ntBASIC0.72□□□□□ -2.29
SLC44A3Q8N4M1 SNORD42B-201ENST00000458893 67 ntBASIC0.72□□□□□ -2.29
SLC44A3Q8N4M1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
SLC44A3Q8N4M1 RNA5SP347-201ENST00000362445 119 ntBASIC0.71□□□□□ -2.3
SLC44A3Q8N4M1 MIR1197-201ENST00000408818 88 ntBASIC0.71□□□□□ -2.3
SLC44A3Q8N4M1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.71□□□□□ -2.3
SLC44A3Q8N4M1 NAMPTP3-201ENST00000569273 224 ntBASIC0.71□□□□□ -2.3
SLC44A3Q8N4M1 MIR4460-201ENST00000577862 86 ntBASIC0.71□□□□□ -2.3
SLC44A3Q8N4M1 MIR4773-1-201ENST00000637203 78 ntBASIC0.71□□□□□ -2.3
SLC44A3Q8N4M1 SNORA36.2-201ENST00000384004 127 ntBASIC0.7□□□□□ -2.3
SLC44A3Q8N4M1 Y_RNA.545-201ENST00000384652 105 ntBASIC0.7□□□□□ -2.3
SLC44A3Q8N4M1 Y_RNA.565-201ENST00000384719 101 ntBASIC0.7□□□□□ -2.3
SLC44A3Q8N4M1 RNU6-752P-201ENST00000516376 102 ntBASIC0.7□□□□□ -2.3
SLC44A3Q8N4M1 RNU6-687P-201ENST00000516443 89 ntBASIC0.7□□□□□ -2.3
SLC44A3Q8N4M1 RNA5SP476-201ENST00000516613 103 ntBASIC0.7□□□□□ -2.3
SLC44A3Q8N4M1 AC069503.3-201ENST00000618674 145 ntBASIC0.7□□□□□ -2.3
SLC44A3Q8N4M1 AC073869.9-201ENST00000641610 120 ntBASIC0.7□□□□□ -2.3
SLC44A3Q8N4M1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.7□□□□□ -2.3
SLC44A3Q8N4M1 RNU6-411P-201ENST00000384451 107 ntBASIC0.69□□□□□ -2.3
SLC44A3Q8N4M1 RNU6-110P-201ENST00000384508 104 ntBASIC0.69□□□□□ -2.3
SLC44A3Q8N4M1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
SLC44A3Q8N4M1 RNU6-274P-201ENST00000459566 107 ntBASIC0.69□□□□□ -2.3
SLC44A3Q8N4M1 HAR1A.1-201ENST00000459583 118 ntBASIC0.69□□□□□ -2.3
SLC44A3Q8N4M1 RNU6-1015P-201ENST00000517121 99 ntBASIC0.69□□□□□ -2.3
SLC44A3Q8N4M1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.69□□□□□ -2.3
SLC44A3Q8N4M1 SNORD118-201ENST00000363593 134 ntBASIC0.68□□□□□ -2.3
SLC44A3Q8N4M1 RNU6-70P-201ENST00000516438 60 ntBASIC0.68□□□□□ -2.3
SLC44A3Q8N4M1 AC018659.1-201ENST00000551083 169 ntBASIC0.68□□□□□ -2.3
SLC44A3Q8N4M1 MIR4653-201ENST00000585107 83 ntBASIC0.68□□□□□ -2.3
SLC44A3Q8N4M1 SNORA70.25-201ENST00000612741 95 ntBASIC0.68□□□□□ -2.3
SLC44A3Q8N4M1 RNU6-35P-201ENST00000384530 107 ntBASIC0.67□□□□□ -2.3
SLC44A3Q8N4M1 SNORA40.17-201ENST00000517256 115 ntBASIC0.67□□□□□ -2.3
SLC44A3Q8N4M1 MIR4752-201ENST00000579672 72 ntBASIC0.67□□□□□ -2.3
SLC44A3Q8N4M1 SNORA25.18-201ENST00000607153 114 ntBASIC0.67□□□□□ -2.3
SLC44A3Q8N4M1 AC092634.7-201ENST00000621022 103 ntBASIC0.67□□□□□ -2.3
SLC44A3Q8N4M1 RNU6-1039P-201ENST00000383931 107 ntBASIC0.66□□□□□ -2.3
SLC44A3Q8N4M1 RNU6-587P-201ENST00000391282 106 ntBASIC0.66□□□□□ -2.3
SLC44A3Q8N4M1 AC098934.3-201ENST00000430450 190 ntBASIC0.66□□□□□ -2.3
SLC44A3Q8N4M1 RNU5B-6P-201ENST00000516765 68 ntBASIC0.66□□□□□ -2.3
SLC44A3Q8N4M1 MIR3675-201ENST00000583661 73 ntBASIC0.66□□□□□ -2.3
SLC44A3Q8N4M1 AC243829.3-201ENST00000622177 108 ntBASIC0.66□□□□□ -2.3
SLC44A3Q8N4M1 RNU6-1241P-201ENST00000384536 107 ntBASIC0.65□□□□□ -2.31
SLC44A3Q8N4M1 SNORA40.8-201ENST00000411034 126 ntBASIC0.65□□□□□ -2.31
SLC44A3Q8N4M1 AC069271.1-201ENST00000445577 156 ntBASIC0.65□□□□□ -2.31
SLC44A3Q8N4M1 MIR5087-201ENST00000635826 76 ntBASIC0.65□□□□□ -2.31
SLC44A3Q8N4M1 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
SLC44A3Q8N4M1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
SLC44A3Q8N4M1 AC006210.1-201ENST00000424882 111 ntBASIC0.64□□□□□ -2.31
SLC44A3Q8N4M1 MIR548AE1-201ENST00000583292 70 ntBASIC0.64□□□□□ -2.31
SLC44A3Q8N4M1 MIR518A1-201ENST00000385068 85 ntBASIC0.63□□□□□ -2.31
SLC44A3Q8N4M1 SNORD110-201ENST00000408189 75 ntBASIC0.63□□□□□ -2.31
SLC44A3Q8N4M1 RNU6-634P-201ENST00000459134 106 ntBASIC0.63□□□□□ -2.31
SLC44A3Q8N4M1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
SLC44A3Q8N4M1 HMGN2P22-201ENST00000427588 175 ntBASIC0.62□□□□□ -2.31
SLC44A3Q8N4M1 AL691482.2-201ENST00000457453 84 ntBASIC0.62□□□□□ -2.31
SLC44A3Q8N4M1 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
SLC44A3Q8N4M1 MIR6755-201ENST00000619993 66 ntBASIC0.62□□□□□ -2.31
SLC44A3Q8N4M1 RNU6-990P-201ENST00000364385 104 ntBASIC0.61□□□□□ -2.31
SLC44A3Q8N4M1 SNORD115-22-201ENST00000364456 82 ntBASIC0.61□□□□□ -2.31
SLC44A3Q8N4M1 SNORD115-31-201ENST00000365318 82 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 264.2 ms