Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SNORD45.1-201ENST00000363181 77 ntBASIC1.21□□□□□ -2.22
SIX5Q8N196 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
SIX5Q8N196 RNA5SP484-201ENST00000458857 111 ntBASIC1.21□□□□□ -2.22
SIX5Q8N196 MIR8053-201ENST00000613344 75 ntBASIC1.21□□□□□ -2.22
SIX5Q8N196 AL162376.1-201ENST00000624117 175 ntBASIC1.21□□□□□ -2.22
SIX5Q8N196 SNORA36.1-201ENST00000363424 132 ntBASIC1.2□□□□□ -2.22
SIX5Q8N196 Y_RNA.374-201ENST00000365606 101 ntBASIC1.2□□□□□ -2.22
SIX5Q8N196 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.2□□□□□ -2.22
SIX5Q8N196 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
SIX5Q8N196 MIR6509-201ENST00000614603 85 ntBASIC1.2□□□□□ -2.22
SIX5Q8N196 RNU6-895P-201ENST00000384125 103 ntBASIC1.19□□□□□ -2.22
SIX5Q8N196 RNU6-1039P-201ENST00000383931 107 ntBASIC1.18□□□□□ -2.22
SIX5Q8N196 AC139453.2-201ENST00000487255 133 ntBASIC1.18□□□□□ -2.22
SIX5Q8N196 AC069503.3-201ENST00000618674 145 ntBASIC1.18□□□□□ -2.22
SIX5Q8N196 MIR608-201ENST00000384820 100 ntBASIC1.17□□□□□ -2.22
SIX5Q8N196 AC006210.1-201ENST00000424882 111 ntBASIC1.17□□□□□ -2.22
SIX5Q8N196 MIR7107-201ENST00000611489 80 ntBASIC1.17□□□□□ -2.22
SIX5Q8N196 SNORD114-4-201ENST00000363962 75 ntBASIC1.16□□□□□ -2.22
SIX5Q8N196 MIR140-201ENST00000385282 100 ntBASIC1.16□□□□□ -2.22
SIX5Q8N196 RNU6-604P-201ENST00000390917 100 ntBASIC1.16□□□□□ -2.22
SIX5Q8N196 SNORD30.1-201ENST00000391309 70 ntBASIC1.16□□□□□ -2.22
SIX5Q8N196 RNU5B-6P-201ENST00000516765 68 ntBASIC1.16□□□□□ -2.22
SIX5Q8N196 RN7SL793P-201ENST00000583259 296 ntBASIC1.16□□□□□ -2.22
SIX5Q8N196 RNU6-649P-201ENST00000384463 107 ntBASIC1.15□□□□□ -2.23
SIX5Q8N196 MIR5000-201ENST00000577717 103 ntBASIC1.15□□□□□ -2.23
SIX5Q8N196 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SIX5Q8N196 MIR203A-201ENST00000384836 110 ntBASIC1.14□□□□□ -2.23
SIX5Q8N196 AC211469.2-201ENST00000605461 205 ntBASIC1.14□□□□□ -2.23
SIX5Q8N196 AC092634.7-201ENST00000621022 103 ntBASIC1.14□□□□□ -2.23
SIX5Q8N196 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
SIX5Q8N196 RNY1P8-201ENST00000383970 114 ntBASIC1.13□□□□□ -2.23
SIX5Q8N196 MIR216A-201ENST00000385063 110 ntBASIC1.13□□□□□ -2.23
SIX5Q8N196 SNORD110-201ENST00000408189 75 ntBASIC1.13□□□□□ -2.23
SIX5Q8N196 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
SIX5Q8N196 SNORD42B-201ENST00000458893 67 ntBASIC1.13□□□□□ -2.23
SIX5Q8N196 RNU6-539P-201ENST00000516665 103 ntBASIC1.13□□□□□ -2.23
SIX5Q8N196 SNORD45A-201ENST00000384512 84 ntBASIC1.12□□□□□ -2.23
SIX5Q8N196 ACA64.5-201ENST00000516207 127 ntBASIC1.12□□□□□ -2.23
SIX5Q8N196 RNU6-881P-201ENST00000516813 102 ntBASIC1.12□□□□□ -2.23
SIX5Q8N196 SNORD115-31-201ENST00000365318 82 ntBASIC1.11□□□□□ -2.23
SIX5Q8N196 MIR373-201ENST00000362273 69 ntBASIC1.1□□□□□ -2.23
SIX5Q8N196 RNU6-663P-201ENST00000391105 106 ntBASIC1.1□□□□□ -2.23
SIX5Q8N196 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.1□□□□□ -2.23
SIX5Q8N196 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SIX5Q8N196 RNA5SP517-201ENST00000364724 117 ntBASIC1.09□□□□□ -2.23
SIX5Q8N196 RNU6-540P-201ENST00000384622 101 ntBASIC1.09□□□□□ -2.23
SIX5Q8N196 SNORD71-201ENST00000411292 86 ntBASIC1.09□□□□□ -2.23
SIX5Q8N196 Y_RNA.30-201ENST00000362572 97 ntBASIC1.08□□□□□ -2.24
SIX5Q8N196 SNORD115-22-201ENST00000364456 82 ntBASIC1.08□□□□□ -2.24
SIX5Q8N196 Y_RNA.407-201ENST00000383986 113 ntBASIC1.08□□□□□ -2.24
SIX5Q8N196 RNU6-260P-201ENST00000384092 107 ntBASIC1.08□□□□□ -2.24
SIX5Q8N196 RNU6-110P-201ENST00000384508 104 ntBASIC1.08□□□□□ -2.24
SIX5Q8N196 RNU6-788P-201ENST00000390967 104 ntBASIC1.08□□□□□ -2.24
SIX5Q8N196 CYP3A137P-201ENST00000562436 69 ntBASIC1.08□□□□□ -2.24
SIX5Q8N196 MIR4473-201ENST00000583731 91 ntBASIC1.08□□□□□ -2.24
SIX5Q8N196 MIR3657-201ENST00000584818 117 ntBASIC1.08□□□□□ -2.24
SIX5Q8N196 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
SIX5Q8N196 RNU6-1187P-201ENST00000364771 110 ntBASIC1.07□□□□□ -2.24
SIX5Q8N196 RNU6-590P-201ENST00000365039 107 ntBASIC1.07□□□□□ -2.24
SIX5Q8N196 SNORA25.18-201ENST00000607153 114 ntBASIC1.07□□□□□ -2.24
SIX5Q8N196 SNORD113.1-201ENST00000363280 73 ntBASIC1.06□□□□□ -2.24
SIX5Q8N196 AC018659.1-201ENST00000551083 169 ntBASIC1.06□□□□□ -2.24
SIX5Q8N196 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
SIX5Q8N196 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.06□□□□□ -2.24
SIX5Q8N196 SNORA2.1-201ENST00000363089 137 ntBASIC1.05□□□□□ -2.24
SIX5Q8N196 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SIX5Q8N196 SNORA40.8-201ENST00000411034 126 ntBASIC1.05□□□□□ -2.24
SIX5Q8N196 MIR4752-201ENST00000579672 72 ntBASIC1.05□□□□□ -2.24
SIX5Q8N196 MIR3973-201ENST00000579824 107 ntBASIC1.05□□□□□ -2.24
SIX5Q8N196 RNU6-1216P-201ENST00000362590 107 ntBASIC1.04□□□□□ -2.24
SIX5Q8N196 RPL39P28-201ENST00000465655 155 ntBASIC1.04□□□□□ -2.24
SIX5Q8N196 PSMC1P5-201ENST00000512850 177 ntBASIC1.04□□□□□ -2.24
SIX5Q8N196 RNU6-990P-201ENST00000364385 104 ntBASIC1.03□□□□□ -2.24
SIX5Q8N196 MTND4LP1-201ENST00000446263 157 ntBASIC1.03□□□□□ -2.24
SIX5Q8N196 RNA5SP147-201ENST00000516493 109 ntBASIC1.03□□□□□ -2.24
SIX5Q8N196 SNORA70.25-201ENST00000612741 95 ntBASIC1.03□□□□□ -2.24
SIX5Q8N196 U6.111-201ENST00000636093 83 ntBASIC1.03□□□□□ -2.24
SIX5Q8N196 AC069271.1-201ENST00000445577 156 ntBASIC1.02□□□□□ -2.25
SIX5Q8N196 AL590095.2-201ENST00000604136 117 ntBASIC1.02□□□□□ -2.25
SIX5Q8N196 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
SIX5Q8N196 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
SIX5Q8N196 MIR532-201ENST00000385025 91 ntBASIC1.01□□□□□ -2.25
SIX5Q8N196 SNORD118-201ENST00000363593 134 ntBASIC1□□□□□ -2.25
SIX5Q8N196 MIR193B-201ENST00000384907 83 ntBASIC1□□□□□ -2.25
SIX5Q8N196 MIR5706-201ENST00000579841 80 ntBASIC1□□□□□ -2.25
SIX5Q8N196 SCARNA17.3-201ENST00000516381 125 ntBASIC0.99□□□□□ -2.25
SIX5Q8N196 U7.6-201ENST00000610841 64 ntBASIC0.99□□□□□ -2.25
SIX5Q8N196 MIR1273G-201ENST00000577677 100 ntBASIC0.98□□□□□ -2.25
SIX5Q8N196 uc_338.10-201ENST00000621872 182 ntBASIC0.98□□□□□ -2.25
SIX5Q8N196 SNORA2A-201ENST00000383885 135 ntBASIC0.97□□□□□ -2.25
SIX5Q8N196 RNU6-800P-201ENST00000384473 103 ntBASIC0.97□□□□□ -2.25
SIX5Q8N196 MIR518A1-201ENST00000385068 85 ntBASIC0.97□□□□□ -2.25
SIX5Q8N196 MIR652-201ENST00000385278 98 ntBASIC0.97□□□□□ -2.25
SIX5Q8N196 RNU6-982P-201ENST00000516216 102 ntBASIC0.97□□□□□ -2.25
SIX5Q8N196 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
SIX5Q8N196 RNU6-668P-201ENST00000364180 107 ntBASIC0.96□□□□□ -2.26
SIX5Q8N196 Y_RNA.250-201ENST00000364542 110 ntBASIC0.96□□□□□ -2.26
SIX5Q8N196 Y_RNA.423-201ENST00000384057 113 ntBASIC0.96□□□□□ -2.26
SIX5Q8N196 RNU6-630P-201ENST00000391258 106 ntBASIC0.96□□□□□ -2.26
SIX5Q8N196 AC125388.1-201ENST00000459631 156 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 265.6 ms