Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 MIR9-2-201ENST00000384838 87 ntBASIC1.03□□□□□ -2.24
LIMS2Q7Z4I7 RNU6-269P-201ENST00000391077 97 ntBASIC1.03□□□□□ -2.24
LIMS2Q7Z4I7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.03□□□□□ -2.24
LIMS2Q7Z4I7 AC025627.3-201ENST00000582078 182 ntBASIC1.03□□□□□ -2.24
LIMS2Q7Z4I7 AL109933.3-201ENST00000619095 188 ntBASIC1.03□□□□□ -2.24
LIMS2Q7Z4I7 SNORD114-22-201ENST00000365423 72 ntBASIC1.02□□□□□ -2.25
LIMS2Q7Z4I7 AC110620.1-201ENST00000416042 228 ntBASIC1.02□□□□□ -2.25
LIMS2Q7Z4I7 RNA5SP404-201ENST00000517118 132 ntBASIC1.02□□□□□ -2.25
LIMS2Q7Z4I7 MIR4460-201ENST00000577862 86 ntBASIC1.02□□□□□ -2.25
LIMS2Q7Z4I7 AL162376.1-201ENST00000624117 175 ntBASIC1.02□□□□□ -2.25
LIMS2Q7Z4I7 SNORA2.1-201ENST00000363089 137 ntBASIC1.01□□□□□ -2.25
LIMS2Q7Z4I7 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
LIMS2Q7Z4I7 SNORD114-24-201ENST00000365029 72 ntBASIC1.01□□□□□ -2.25
LIMS2Q7Z4I7 RNA5SP255-201ENST00000516370 107 ntBASIC1.01□□□□□ -2.25
LIMS2Q7Z4I7 Y_RNA.355-201ENST00000365462 98 ntBASIC1□□□□□ -2.25
LIMS2Q7Z4I7 RNU6-716P-201ENST00000365621 103 ntBASIC1□□□□□ -2.25
LIMS2Q7Z4I7 Y_RNA.375-201ENST00000365625 101 ntBASIC1□□□□□ -2.25
LIMS2Q7Z4I7 RNA5SP220-201ENST00000516298 104 ntBASIC1□□□□□ -2.25
LIMS2Q7Z4I7 MIR3973-201ENST00000579824 107 ntBASIC1□□□□□ -2.25
LIMS2Q7Z4I7 MIR7111-201ENST00000619751 72 ntBASIC1□□□□□ -2.25
LIMS2Q7Z4I7 MIR6739-201ENST00000622461 75 ntBASIC1□□□□□ -2.25
LIMS2Q7Z4I7 RNU6-990P-201ENST00000364385 104 ntBASIC0.99□□□□□ -2.25
LIMS2Q7Z4I7 RNU6-645P-201ENST00000364649 106 ntBASIC0.99□□□□□ -2.25
LIMS2Q7Z4I7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
LIMS2Q7Z4I7 RNU6-42P-201ENST00000384165 107 ntBASIC0.99□□□□□ -2.25
LIMS2Q7Z4I7 MIR548L-201ENST00000408303 86 ntBASIC0.99□□□□□ -2.25
LIMS2Q7Z4I7 MTND4LP1-201ENST00000446263 157 ntBASIC0.99□□□□□ -2.25
LIMS2Q7Z4I7 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
LIMS2Q7Z4I7 AC069503.3-201ENST00000618674 145 ntBASIC0.99□□□□□ -2.25
LIMS2Q7Z4I7 MIR18A-201ENST00000362310 71 ntBASIC0.98□□□□□ -2.25
LIMS2Q7Z4I7 SNORA36.1-201ENST00000363424 132 ntBASIC0.98□□□□□ -2.25
LIMS2Q7Z4I7 RNU6-668P-201ENST00000364180 107 ntBASIC0.98□□□□□ -2.25
LIMS2Q7Z4I7 RNA5SP484-201ENST00000458857 111 ntBASIC0.98□□□□□ -2.25
LIMS2Q7Z4I7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
LIMS2Q7Z4I7 RNU6-656P-201ENST00000516785 107 ntBASIC0.98□□□□□ -2.25
LIMS2Q7Z4I7 AC018659.1-201ENST00000551083 169 ntBASIC0.98□□□□□ -2.25
LIMS2Q7Z4I7 RNU6-499P-201ENST00000365615 107 ntBASIC0.97□□□□□ -2.25
LIMS2Q7Z4I7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.97□□□□□ -2.25
LIMS2Q7Z4I7 Y_RNA.250-201ENST00000364542 110 ntBASIC0.96□□□□□ -2.26
LIMS2Q7Z4I7 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
LIMS2Q7Z4I7 RNU6-542P-201ENST00000516405 103 ntBASIC0.96□□□□□ -2.26
LIMS2Q7Z4I7 RNU5B-6P-201ENST00000516765 68 ntBASIC0.96□□□□□ -2.26
LIMS2Q7Z4I7 MIR4452-201ENST00000583004 71 ntBASIC0.96□□□□□ -2.26
LIMS2Q7Z4I7 SNORD114-4-201ENST00000363962 75 ntBASIC0.95□□□□□ -2.26
LIMS2Q7Z4I7 RNU4-45P-201ENST00000365469 141 ntBASIC0.95□□□□□ -2.26
LIMS2Q7Z4I7 SNORD99-201ENST00000408612 74 ntBASIC0.95□□□□□ -2.26
LIMS2Q7Z4I7 MIR6734-201ENST00000621166 68 ntBASIC0.95□□□□□ -2.26
LIMS2Q7Z4I7 Y_RNA.633-201ENST00000459107 95 ntBASIC0.93□□□□□ -2.26
LIMS2Q7Z4I7 AC011195.1-201ENST00000578177 177 ntBASIC0.93□□□□□ -2.26
LIMS2Q7Z4I7 AC092634.7-201ENST00000621022 103 ntBASIC0.93□□□□□ -2.26
LIMS2Q7Z4I7 RNA5SP215-201ENST00000363440 122 ntBASIC0.92□□□□□ -2.26
LIMS2Q7Z4I7 RNA5SP227-201ENST00000516184 113 ntBASIC0.92□□□□□ -2.26
LIMS2Q7Z4I7 RNA5SP147-201ENST00000516493 109 ntBASIC0.92□□□□□ -2.26
LIMS2Q7Z4I7 RNA5SP268-201ENST00000516828 124 ntBASIC0.92□□□□□ -2.26
LIMS2Q7Z4I7 RNA5SP94-201ENST00000516917 108 ntBASIC0.92□□□□□ -2.26
LIMS2Q7Z4I7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.92□□□□□ -2.26
LIMS2Q7Z4I7 AC211469.2-201ENST00000605461 205 ntBASIC0.92□□□□□ -2.26
LIMS2Q7Z4I7 MIR521-2-201ENST00000384818 87 ntBASIC0.91□□□□□ -2.26
LIMS2Q7Z4I7 MIR4698-201ENST00000577795 80 ntBASIC0.91□□□□□ -2.26
LIMS2Q7Z4I7 MIR7107-201ENST00000611489 80 ntBASIC0.91□□□□□ -2.26
LIMS2Q7Z4I7 RNU6-1089P-201ENST00000516473 104 ntBASIC0.9□□□□□ -2.27
LIMS2Q7Z4I7 Y_RNA.407-201ENST00000383986 113 ntBASIC0.89□□□□□ -2.27
LIMS2Q7Z4I7 MIR652-201ENST00000385278 98 ntBASIC0.89□□□□□ -2.27
LIMS2Q7Z4I7 SCARNA21.1-201ENST00000515996 128 ntBASIC0.89□□□□□ -2.27
LIMS2Q7Z4I7 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
LIMS2Q7Z4I7 SCARNA17.3-201ENST00000516381 125 ntBASIC0.89□□□□□ -2.27
LIMS2Q7Z4I7 AL353765.1-201ENST00000605514 183 ntBASIC0.89□□□□□ -2.27
LIMS2Q7Z4I7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.89□□□□□ -2.27
LIMS2Q7Z4I7 SNORA25.5-201ENST00000363782 126 ntBASIC0.88□□□□□ -2.27
LIMS2Q7Z4I7 RNU6-1162P-201ENST00000384443 104 ntBASIC0.88□□□□□ -2.27
LIMS2Q7Z4I7 MIR548AE1-201ENST00000583292 70 ntBASIC0.88□□□□□ -2.27
LIMS2Q7Z4I7 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.88□□□□□ -2.27
LIMS2Q7Z4I7 RNA5SP299-201ENST00000391203 116 ntBASIC0.87□□□□□ -2.27
LIMS2Q7Z4I7 MTND4LP19-201ENST00000403051 166 ntBASIC0.87□□□□□ -2.27
LIMS2Q7Z4I7 SNORD110-201ENST00000408189 75 ntBASIC0.87□□□□□ -2.27
LIMS2Q7Z4I7 RPS29P1-201ENST00000465274 159 ntBASIC0.87□□□□□ -2.27
LIMS2Q7Z4I7 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
LIMS2Q7Z4I7 RNU1-29P-201ENST00000606574 126 ntBASIC0.87□□□□□ -2.27
LIMS2Q7Z4I7 MIR489-201ENST00000384923 84 ntBASIC0.86□□□□□ -2.27
LIMS2Q7Z4I7 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
LIMS2Q7Z4I7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.86□□□□□ -2.27
LIMS2Q7Z4I7 AC079150.2-201ENST00000443733 78 ntBASIC0.86□□□□□ -2.27
LIMS2Q7Z4I7 AL157398.1-201ENST00000452981 186 ntBASIC0.86□□□□□ -2.27
LIMS2Q7Z4I7 snoU13.13-201ENST00000458842 104 ntBASIC0.86□□□□□ -2.27
LIMS2Q7Z4I7 SNORA70.25-201ENST00000612741 95 ntBASIC0.86□□□□□ -2.27
LIMS2Q7Z4I7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
LIMS2Q7Z4I7 MIR582-201ENST00000365731 98 ntBASIC0.85□□□□□ -2.27
LIMS2Q7Z4I7 SNORA15B-2-201ENST00000384058 135 ntBASIC0.85□□□□□ -2.27
LIMS2Q7Z4I7 SNORA15B-1-201ENST00000384334 135 ntBASIC0.85□□□□□ -2.27
LIMS2Q7Z4I7 RNU6-987P-201ENST00000384759 104 ntBASIC0.85□□□□□ -2.27
LIMS2Q7Z4I7 MIR633-201ENST00000384821 98 ntBASIC0.85□□□□□ -2.27
LIMS2Q7Z4I7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
LIMS2Q7Z4I7 AC006210.1-201ENST00000424882 111 ntBASIC0.85□□□□□ -2.27
LIMS2Q7Z4I7 CYP3A137P-201ENST00000562436 69 ntBASIC0.85□□□□□ -2.27
LIMS2Q7Z4I7 MIR6788-201ENST00000618842 66 ntBASIC0.85□□□□□ -2.27
LIMS2Q7Z4I7 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
LIMS2Q7Z4I7 RNA5SP192-201ENST00000364404 120 ntBASIC0.84□□□□□ -2.27
LIMS2Q7Z4I7 MIR548E-201ENST00000408287 88 ntBASIC0.84□□□□□ -2.27
LIMS2Q7Z4I7 MIR548J-201ENST00000408833 112 ntBASIC0.84□□□□□ -2.27
LIMS2Q7Z4I7 RNU4-37P-201ENST00000410214 84 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms