Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 RNU6-400P-201ENST00000391173 106 ntBASIC-2.38□□□□□ -2.79
USP54Q70EL1 AC025521.1-201ENST00000621624 286 ntBASIC-2.38□□□□□ -2.79
USP54Q70EL1 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.39□□□□□ -2.79
USP54Q70EL1 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.39□□□□□ -2.79
USP54Q70EL1 RNU6-774P-201ENST00000363238 107 ntBASIC-2.39□□□□□ -2.79
USP54Q70EL1 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.39□□□□□ -2.79
USP54Q70EL1 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.39□□□□□ -2.79
USP54Q70EL1 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.39□□□□□ -2.79
USP54Q70EL1 MTND5P22-201ENST00000458380 195 ntBASIC-2.39□□□□□ -2.79
USP54Q70EL1 RNU7-88P-201ENST00000458752 63 ntBASIC-2.39□□□□□ -2.79
USP54Q70EL1 RNU6-62P-201ENST00000516526 102 ntBASIC-2.39□□□□□ -2.79
USP54Q70EL1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.39□□□□□ -2.79
USP54Q70EL1 Y_RNA.318-201ENST00000365131 97 ntBASIC-2.4□□□□□ -2.79
USP54Q70EL1 MT-TW-201ENST00000387382 68 ntBASIC-2.4□□□□□ -2.79
USP54Q70EL1 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.4□□□□□ -2.79
USP54Q70EL1 MIR3908-201ENST00000579798 126 ntBASIC-2.4□□□□□ -2.79
USP54Q70EL1 MIR548Z-201ENST00000584743 97 ntBASIC-2.41□□□□□ -2.79
USP54Q70EL1 RNU6-382P-201ENST00000365181 106 ntBASIC-2.41□□□□□ -2.8
USP54Q70EL1 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.41□□□□□ -2.8
USP54Q70EL1 RNA5SP136-201ENST00000410906 107 ntBASIC-2.41□□□□□ -2.8
USP54Q70EL1 AL513043.2-201ENST00000573941 143 ntBASIC-2.41□□□□□ -2.8
USP54Q70EL1 MIR23C-201ENST00000579846 100 ntBASIC-2.41□□□□□ -2.8
USP54Q70EL1 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.42□□□□□ -2.8
USP54Q70EL1 RNU6-450P-201ENST00000364654 107 ntBASIC-2.42□□□□□ -2.8
USP54Q70EL1 RNU6-275P-201ENST00000364910 107 ntBASIC-2.42□□□□□ -2.8
USP54Q70EL1 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.42□□□□□ -2.8
USP54Q70EL1 RNU6-1215P-201ENST00000384441 102 ntBASIC-2.42□□□□□ -2.8
USP54Q70EL1 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.42□□□□□ -2.8
USP54Q70EL1 RNU6-493P-201ENST00000391321 108 ntBASIC-2.42□□□□□ -2.8
USP54Q70EL1 MIR548Q-201ENST00000408404 100 ntBASIC-2.42□□□□□ -2.8
USP54Q70EL1 RPL35AP4-201ENST00000412007 102 ntBASIC-2.42□□□□□ -2.8
USP54Q70EL1 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.42□□□□□ -2.8
USP54Q70EL1 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.43□□□□□ -2.8
USP54Q70EL1 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.43□□□□□ -2.8
USP54Q70EL1 RNU6-695P-201ENST00000391157 104 ntBASIC-2.43□□□□□ -2.8
USP54Q70EL1 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.44□□□□□ -2.8
USP54Q70EL1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.44□□□□□ -2.8
USP54Q70EL1 MTND1P19-201ENST00000511780 315 ntBASIC-2.44□□□□□ -2.8
USP54Q70EL1 MIR4643-201ENST00000577473 78 ntBASIC-2.44□□□□□ -2.8
USP54Q70EL1 AL132765.2-201ENST00000610812 351 ntBASIC-2.44□□□□□ -2.8
USP54Q70EL1 RNU6-238P-201ENST00000363313 106 ntBASIC-2.44□□□□□ -2.8
USP54Q70EL1 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.44□□□□□ -2.8
USP54Q70EL1 MIR548P-201ENST00000408336 84 ntBASIC-2.44□□□□□ -2.8
USP54Q70EL1 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.45□□□□□ -2.8
USP54Q70EL1 RNU6-876P-201ENST00000391295 104 ntBASIC-2.45□□□□□ -2.8
USP54Q70EL1 SNORD4B-201ENST00000459083 72 ntBASIC-2.45□□□□□ -2.8
USP54Q70EL1 MIR548D2-201ENST00000384955 97 ntBASIC-2.46□□□□□ -2.8
USP54Q70EL1 RNU4-88P-201ENST00000411220 86 ntBASIC-2.46□□□□□ -2.8
USP54Q70EL1 AL021921.1-201ENST00000442774 93 ntBASIC-2.46□□□□□ -2.8
USP54Q70EL1 SNORD19B-201ENST00000459623 84 ntBASIC-2.46□□□□□ -2.8
USP54Q70EL1 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.46□□□□□ -2.8
USP54Q70EL1 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.47□□□□□ -2.8
USP54Q70EL1 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.47□□□□□ -2.8
USP54Q70EL1 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.47□□□□□ -2.8
USP54Q70EL1 MIR3064-201ENST00000581130 66 ntBASIC-2.47□□□□□ -2.8
USP54Q70EL1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-2.47□□□□□ -2.8
USP54Q70EL1 MIR1302-1-201ENST00000637932 143 ntBASIC-2.47□□□□□ -2.8
USP54Q70EL1 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.47□□□□□ -2.81
USP54Q70EL1 MIR4773-1-201ENST00000637203 78 ntBASIC-2.47□□□□□ -2.81
USP54Q70EL1 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.48□□□□□ -2.81
USP54Q70EL1 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.48□□□□□ -2.81
USP54Q70EL1 MIR577-201ENST00000385196 96 ntBASIC-2.5□□□□□ -2.81
USP54Q70EL1 SNORA18.5-201ENST00000516616 101 ntBASIC-2.5□□□□□ -2.81
USP54Q70EL1 MIR1302-6-201ENST00000408466 90 ntBASIC-2.5□□□□□ -2.81
USP54Q70EL1 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.5□□□□□ -2.81
USP54Q70EL1 AP000770.2-201ENST00000623694 100 ntBASIC-2.5□□□□□ -2.81
USP54Q70EL1 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.51□□□□□ -2.81
USP54Q70EL1 RNU6-644P-201ENST00000391155 98 ntBASIC-2.52□□□□□ -2.81
USP54Q70EL1 AL118496.2-201ENST00000448300 230 ntBASIC-2.52□□□□□ -2.81
USP54Q70EL1 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.52□□□□□ -2.81
USP54Q70EL1 MIR548AM-201ENST00000584298 74 ntBASIC-2.52□□□□□ -2.81
USP54Q70EL1 U2.14-201ENST00000615943 113 ntBASIC-2.52□□□□□ -2.81
USP54Q70EL1 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.53□□□□□ -2.81
USP54Q70EL1 RNU6-824P-201ENST00000363724 104 ntBASIC-2.53□□□□□ -2.81
USP54Q70EL1 RNU6-151P-201ENST00000364158 107 ntBASIC-2.53□□□□□ -2.81
USP54Q70EL1 AC104996.3-201ENST00000590718 94 ntBASIC-2.53□□□□□ -2.81
USP54Q70EL1 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.53□□□□□ -2.82
USP54Q70EL1 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.53□□□□□ -2.82
USP54Q70EL1 MIR1263-201ENST00000408324 86 ntBASIC-2.53□□□□□ -2.82
USP54Q70EL1 RNU6-518P-201ENST00000516056 96 ntBASIC-2.53□□□□□ -2.82
USP54Q70EL1 MIR4439-201ENST00000583746 80 ntBASIC-2.53□□□□□ -2.82
USP54Q70EL1 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.54□□□□□ -2.82
USP54Q70EL1 RNU6-246P-201ENST00000384702 107 ntBASIC-2.54□□□□□ -2.82
USP54Q70EL1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.54□□□□□ -2.82
USP54Q70EL1 RNA5SP292-201ENST00000390974 118 ntBASIC-2.55□□□□□ -2.82
USP54Q70EL1 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.55□□□□□ -2.82
USP54Q70EL1 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.56□□□□□ -2.82
USP54Q70EL1 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.56□□□□□ -2.82
USP54Q70EL1 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.57□□□□□ -2.82
USP54Q70EL1 RNU6-832P-201ENST00000363319 107 ntBASIC-2.57□□□□□ -2.82
USP54Q70EL1 RNU6-519P-201ENST00000410590 108 ntBASIC-2.57□□□□□ -2.82
USP54Q70EL1 AC130289.1-201ENST00000577321 73 ntBASIC-2.57□□□□□ -2.82
USP54Q70EL1 AC113195.1-201ENST00000579952 141 ntBASIC-2.57□□□□□ -2.82
USP54Q70EL1 RNU6-841P-201ENST00000383872 107 ntBASIC-2.58□□□□□ -2.82
USP54Q70EL1 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.58□□□□□ -2.82
USP54Q70EL1 RNU6-816P-201ENST00000390914 107 ntBASIC-2.58□□□□□ -2.82
USP54Q70EL1 SNORD37.2-201ENST00000391075 66 ntBASIC-2.58□□□□□ -2.82
USP54Q70EL1 RNU6-1268P-201ENST00000391214 107 ntBASIC-2.58□□□□□ -2.82
USP54Q70EL1 RNU6-1239P-201ENST00000391310 107 ntBASIC-2.58□□□□□ -2.82
USP54Q70EL1 RNU6-623P-201ENST00000363143 105 ntBASIC-2.59□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 240.9 ms