Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MIR548A1-201ENST00000385041 97 ntBASIC-1.02□□□□□ -2.57
H3F3CQ6NXT2 MIRLET7B-201ENST00000385140 83 ntBASIC-1.02□□□□□ -2.57
H3F3CQ6NXT2 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
H3F3CQ6NXT2 RNU7-107P-201ENST00000459121 61 ntBASIC-1.02□□□□□ -2.57
H3F3CQ6NXT2 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.02□□□□□ -2.57
H3F3CQ6NXT2 MIR548Z-201ENST00000584743 97 ntBASIC-1.02□□□□□ -2.57
H3F3CQ6NXT2 AC104996.3-201ENST00000590718 94 ntBASIC-1.02□□□□□ -2.57
H3F3CQ6NXT2 U6.96-201ENST00000636425 70 ntBASIC-1.02□□□□□ -2.57
H3F3CQ6NXT2 RNU4-36P-201ENST00000364294 144 ntBASIC-1.03□□□□□ -2.57
H3F3CQ6NXT2 SNORD45B-201ENST00000364617 72 ntBASIC-1.03□□□□□ -2.57
H3F3CQ6NXT2 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.03□□□□□ -2.57
H3F3CQ6NXT2 RNU6-813P-201ENST00000384691 107 ntBASIC-1.03□□□□□ -2.57
H3F3CQ6NXT2 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.03□□□□□ -2.57
H3F3CQ6NXT2 SNORD90-201ENST00000391145 111 ntBASIC-1.03□□□□□ -2.57
H3F3CQ6NXT2 RNU6-592P-201ENST00000411333 103 ntBASIC-1.03□□□□□ -2.57
H3F3CQ6NXT2 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.03□□□□□ -2.57
H3F3CQ6NXT2 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.04□□□□□ -2.58
H3F3CQ6NXT2 RNA5SP292-201ENST00000390974 118 ntBASIC-1.04□□□□□ -2.58
H3F3CQ6NXT2 RNU6-644P-201ENST00000391155 98 ntBASIC-1.04□□□□□ -2.58
H3F3CQ6NXT2 RNU6-519P-201ENST00000410590 108 ntBASIC-1.04□□□□□ -2.58
H3F3CQ6NXT2 SNORD4B-201ENST00000459083 72 ntBASIC-1.04□□□□□ -2.58
H3F3CQ6NXT2 RNU6-795P-201ENST00000516323 103 ntBASIC-1.04□□□□□ -2.58
H3F3CQ6NXT2 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.05□□□□□ -2.58
H3F3CQ6NXT2 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.05□□□□□ -2.58
H3F3CQ6NXT2 RNA5SP147-201ENST00000516493 109 ntBASIC-1.05□□□□□ -2.58
H3F3CQ6NXT2 RNU6-182P-201ENST00000516970 105 ntBASIC-1.05□□□□□ -2.58
H3F3CQ6NXT2 RNU6-208P-201ENST00000362431 107 ntBASIC-1.06□□□□□ -2.58
H3F3CQ6NXT2 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.06□□□□□ -2.58
H3F3CQ6NXT2 SNORD74.6-201ENST00000364796 70 ntBASIC-1.06□□□□□ -2.58
H3F3CQ6NXT2 MIR203A-201ENST00000384836 110 ntBASIC-1.06□□□□□ -2.58
H3F3CQ6NXT2 SNORD83B-201ENST00000386745 93 ntBASIC-1.06□□□□□ -2.58
H3F3CQ6NXT2 MIR4679-2-201ENST00000578358 77 ntBASIC-1.06□□□□□ -2.58
H3F3CQ6NXT2 MIR5009-201ENST00000578736 100 ntBASIC-1.06□□□□□ -2.58
H3F3CQ6NXT2 SNORD115-23-201ENST00000364461 82 ntBASIC-1.07□□□□□ -2.58
H3F3CQ6NXT2 SNORA24B-201ENST00000384176 131 ntBASIC-1.07□□□□□ -2.58
H3F3CQ6NXT2 SNORA40-201ENST00000388090 126 ntBASIC-1.07□□□□□ -2.58
H3F3CQ6NXT2 SNORA18.5-201ENST00000516616 101 ntBASIC-1.07□□□□□ -2.58
H3F3CQ6NXT2 MIR4439-201ENST00000583746 80 ntBASIC-1.07□□□□□ -2.58
H3F3CQ6NXT2 AC090617.8-201ENST00000623339 167 ntBASIC-1.07□□□□□ -2.58
H3F3CQ6NXT2 RNU4-32P-201ENST00000363404 141 ntBASIC-1.08□□□□□ -2.58
H3F3CQ6NXT2 SNORD75.2-201ENST00000408784 58 ntBASIC-1.08□□□□□ -2.58
H3F3CQ6NXT2 AL353621.2-201ENST00000605340 133 ntBASIC-1.08□□□□□ -2.58
H3F3CQ6NXT2 MIR4773-1-201ENST00000637203 78 ntBASIC-1.08□□□□□ -2.58
H3F3CQ6NXT2 RNU6-382P-201ENST00000365181 106 ntBASIC-1.09□□□□□ -2.58
H3F3CQ6NXT2 RNU6-257P-201ENST00000410238 98 ntBASIC-1.09□□□□□ -2.58
H3F3CQ6NXT2 AL500527.2-201ENST00000454105 95 ntBASIC-1.09□□□□□ -2.58
H3F3CQ6NXT2 RNU6-971P-201ENST00000516920 106 ntBASIC-1.09□□□□□ -2.58
H3F3CQ6NXT2 MIR4777-201ENST00000583710 86 ntBASIC-1.09□□□□□ -2.58
H3F3CQ6NXT2 AC012531.4-201ENST00000616509 177 ntBASIC-1.09□□□□□ -2.58
H3F3CQ6NXT2 SNORD114-17-201ENST00000364699 75 ntBASIC-1.1□□□□□ -2.59
H3F3CQ6NXT2 RNU6-886P-201ENST00000384319 105 ntBASIC-1.1□□□□□ -2.59
H3F3CQ6NXT2 SNORD64-201ENST00000386683 67 ntBASIC-1.1□□□□□ -2.59
H3F3CQ6NXT2 MTATP6P29-201ENST00000415057 132 ntBASIC-1.1□□□□□ -2.59
H3F3CQ6NXT2 SNORD33.1-201ENST00000516213 88 ntBASIC-1.1□□□□□ -2.59
H3F3CQ6NXT2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.1□□□□□ -2.59
H3F3CQ6NXT2 AC099654.10-201ENST00000640395 161 ntBASIC-1.1□□□□□ -2.59
H3F3CQ6NXT2 MIR409-201ENST00000362237 79 ntBASIC-1.11□□□□□ -2.59
H3F3CQ6NXT2 MIR548I1-201ENST00000408810 149 ntBASIC-1.11□□□□□ -2.59
H3F3CQ6NXT2 RNU6-346P-201ENST00000516288 111 ntBASIC-1.11□□□□□ -2.59
H3F3CQ6NXT2 RNA5SP67-201ENST00000516422 131 ntBASIC-1.11□□□□□ -2.59
H3F3CQ6NXT2 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.12□□□□□ -2.59
H3F3CQ6NXT2 MIR548A3-201ENST00000385297 97 ntBASIC-1.12□□□□□ -2.59
H3F3CQ6NXT2 MT-TG-201ENST00000387429 68 ntBASIC-1.12□□□□□ -2.59
H3F3CQ6NXT2 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.12□□□□□ -2.59
H3F3CQ6NXT2 YWHAEP3-201ENST00000582767 121 ntBASIC-1.12□□□□□ -2.59
H3F3CQ6NXT2 AL353803.5-201ENST00000599815 141 ntBASIC-1.12□□□□□ -2.59
H3F3CQ6NXT2 AC006254.2-201ENST00000603259 279 ntBASIC-1.12□□□□□ -2.59
H3F3CQ6NXT2 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.13□□□□□ -2.59
H3F3CQ6NXT2 SNORA62.4-201ENST00000365504 151 ntBASIC-1.13□□□□□ -2.59
H3F3CQ6NXT2 RNU6-431P-201ENST00000383874 107 ntBASIC-1.13□□□□□ -2.59
H3F3CQ6NXT2 RNU6-260P-201ENST00000384092 107 ntBASIC-1.13□□□□□ -2.59
H3F3CQ6NXT2 snoU13.17-201ENST00000458802 104 ntBASIC-1.13□□□□□ -2.59
H3F3CQ6NXT2 RNU7-24P-201ENST00000458867 62 ntBASIC-1.13□□□□□ -2.59
H3F3CQ6NXT2 uc_338.19-201ENST00000616808 99 ntBASIC-1.13□□□□□ -2.59
H3F3CQ6NXT2 AL627230.5-201ENST00000619807 58 ntBASIC-1.13□□□□□ -2.59
H3F3CQ6NXT2 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.14□□□□□ -2.59
H3F3CQ6NXT2 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.14□□□□□ -2.59
H3F3CQ6NXT2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.14□□□□□ -2.59
H3F3CQ6NXT2 RNU7-200P-201ENST00000516105 62 ntBASIC-1.14□□□□□ -2.59
H3F3CQ6NXT2 RNU6-62P-201ENST00000516526 102 ntBASIC-1.14□□□□□ -2.59
H3F3CQ6NXT2 AC140658.3-201ENST00000567603 271 ntBASIC-1.14□□□□□ -2.59
H3F3CQ6NXT2 MIR6509-201ENST00000614603 85 ntBASIC-1.14□□□□□ -2.59
H3F3CQ6NXT2 SNORA33.1-201ENST00000364957 130 ntBASIC-1.15□□□□□ -2.59
H3F3CQ6NXT2 SNORA19.1-201ENST00000410656 129 ntBASIC-1.15□□□□□ -2.59
H3F3CQ6NXT2 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.15□□□□□ -2.59
H3F3CQ6NXT2 RNU6-824P-201ENST00000363724 104 ntBASIC-1.16□□□□□ -2.6
H3F3CQ6NXT2 RNY1P7-201ENST00000384743 110 ntBASIC-1.16□□□□□ -2.6
H3F3CQ6NXT2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
H3F3CQ6NXT2 MIR1255B2-201ENST00000408618 67 ntBASIC-1.16□□□□□ -2.6
H3F3CQ6NXT2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.16□□□□□ -2.6
H3F3CQ6NXT2 MIR3914-2-201ENST00000637339 95 ntBASIC-1.16□□□□□ -2.6
H3F3CQ6NXT2 RNU5F-1-201ENST00000362507 117 ntBASIC-1.17□□□□□ -2.6
H3F3CQ6NXT2 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.17□□□□□ -2.6
H3F3CQ6NXT2 AL691482.2-201ENST00000457453 84 ntBASIC-1.17□□□□□ -2.6
H3F3CQ6NXT2 AC026421.1-201ENST00000519101 163 ntBASIC-1.17□□□□□ -2.6
H3F3CQ6NXT2 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.18□□□□□ -2.6
H3F3CQ6NXT2 MIR4464-201ENST00000580818 92 ntBASIC-1.18□□□□□ -2.6
H3F3CQ6NXT2 MIR4499-201ENST00000584834 69 ntBASIC-1.18□□□□□ -2.6
H3F3CQ6NXT2 MIR6888-201ENST00000621977 67 ntBASIC-1.18□□□□□ -2.6
H3F3CQ6NXT2 SNORD58A-201ENST00000383875 65 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms