Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 U3.27-201ENST00000391237 200 ntBASIC0.04□□□□□ -2.4
KRT39Q6A163 RNU6-402P-201ENST00000410678 103 ntBASIC0.04□□□□□ -2.4
KRT39Q6A163 RNU7-188P-201ENST00000517063 64 ntBASIC0.04□□□□□ -2.4
KRT39Q6A163 RNU6-762P-201ENST00000517107 102 ntBASIC0.04□□□□□ -2.4
KRT39Q6A163 SCARNA11.2-201ENST00000517183 154 ntBASIC0.04□□□□□ -2.4
KRT39Q6A163 MIR4796-201ENST00000580742 81 ntBASIC0.04□□□□□ -2.4
KRT39Q6A163 RN7SL660P-201ENST00000614852 299 ntBASIC0.04□□□□□ -2.4
KRT39Q6A163 RNU6-633P-201ENST00000362612 103 ntBASIC0.03□□□□□ -2.4
KRT39Q6A163 Y_RNA.407-201ENST00000383986 113 ntBASIC0.03□□□□□ -2.4
KRT39Q6A163 MIR593-201ENST00000384856 100 ntBASIC0.03□□□□□ -2.4
KRT39Q6A163 MIR145-201ENST00000384967 88 ntBASIC0.03□□□□□ -2.4
KRT39Q6A163 MIR652-201ENST00000385278 98 ntBASIC0.03□□□□□ -2.4
KRT39Q6A163 MIR216B-201ENST00000390186 82 ntBASIC0.03□□□□□ -2.4
KRT39Q6A163 RNA5SP63-201ENST00000391225 112 ntBASIC0.03□□□□□ -2.4
KRT39Q6A163 snoU13.17-201ENST00000458802 104 ntBASIC0.03□□□□□ -2.4
KRT39Q6A163 RNU6-175P-201ENST00000516896 107 ntBASIC0.03□□□□□ -2.4
KRT39Q6A163 Y_RNA.220-201ENST00000364244 109 ntBASIC0.02□□□□□ -2.41
KRT39Q6A163 MIR582-201ENST00000365731 98 ntBASIC0.02□□□□□ -2.41
KRT39Q6A163 MIR519C-201ENST00000385053 87 ntBASIC0.02□□□□□ -2.41
KRT39Q6A163 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
KRT39Q6A163 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
KRT39Q6A163 SNORA75.1-201ENST00000391130 148 ntBASIC0.02□□□□□ -2.41
KRT39Q6A163 MIR1236-201ENST00000408340 102 ntBASIC0.02□□□□□ -2.41
KRT39Q6A163 Y_RNA.593-201ENST00000410292 98 ntBASIC0.02□□□□□ -2.41
KRT39Q6A163 RNA5SP163-201ENST00000410304 99 ntBASIC0.02□□□□□ -2.41
KRT39Q6A163 RNU6-844P-201ENST00000517175 102 ntBASIC0.02□□□□□ -2.41
KRT39Q6A163 AC084368.1-201ENST00000620935 65 ntBASIC0.02□□□□□ -2.41
KRT39Q6A163 RNU6-1298P-201ENST00000362456 101 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 RNU6-495P-201ENST00000362995 107 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 RNU6-824P-201ENST00000363724 104 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 RNU6-652P-201ENST00000365488 107 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 RNU6-675P-201ENST00000384236 104 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 SNORD116-22-201ENST00000384430 92 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 MIR106A-201ENST00000384870 81 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 MIR610-201ENST00000385139 96 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 SNORA49-201ENST00000386157 136 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 RNU6-1177P-201ENST00000391058 104 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 uc_338.10-201ENST00000621872 182 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 MIR6514-201ENST00000622549 70 ntBASIC0.01□□□□□ -2.41
KRT39Q6A163 Y_RNA.17-201ENST00000362433 111 ntBASIC0□□□□□ -2.41
KRT39Q6A163 RNU5F-1-201ENST00000362507 117 ntBASIC0□□□□□ -2.41
KRT39Q6A163 RNU6-382P-201ENST00000365181 106 ntBASIC0□□□□□ -2.41
KRT39Q6A163 RNU6-929P-201ENST00000384429 107 ntBASIC0□□□□□ -2.41
KRT39Q6A163 MIR548E-201ENST00000408287 88 ntBASIC0□□□□□ -2.41
KRT39Q6A163 RNY4P30-201ENST00000410216 95 ntBASIC0□□□□□ -2.41
KRT39Q6A163 MTATP6P29-201ENST00000415057 132 ntBASIC0□□□□□ -2.41
KRT39Q6A163 RNU7-165P-201ENST00000458864 60 ntBASIC0□□□□□ -2.41
KRT39Q6A163 AC097510.1-201ENST00000510945 133 ntBASIC0□□□□□ -2.41
KRT39Q6A163 SCARNA17.3-201ENST00000516381 125 ntBASIC0□□□□□ -2.41
KRT39Q6A163 RNU6-180P-201ENST00000516697 61 ntBASIC0□□□□□ -2.41
KRT39Q6A163 SNORA40.17-201ENST00000517256 115 ntBASIC0□□□□□ -2.41
KRT39Q6A163 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
KRT39Q6A163 MIR4743-201ENST00000584576 69 ntBASIC0□□□□□ -2.41
KRT39Q6A163 MIR548BB-201ENST00000626714 66 ntBASIC0□□□□□ -2.41
KRT39Q6A163 MIR371B-201ENST00000638082 66 ntBASIC0□□□□□ -2.41
KRT39Q6A163 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.01□□□□□ -2.41
KRT39Q6A163 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
KRT39Q6A163 RNU6-990P-201ENST00000364385 104 ntBASIC-0.01□□□□□ -2.41
KRT39Q6A163 SNORD114-29-201ENST00000364819 70 ntBASIC-0.01□□□□□ -2.41
KRT39Q6A163 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.01□□□□□ -2.41
KRT39Q6A163 SNORD75.2-201ENST00000408784 58 ntBASIC-0.01□□□□□ -2.41
KRT39Q6A163 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.01□□□□□ -2.41
KRT39Q6A163 MIR4768-201ENST00000585270 74 ntBASIC-0.01□□□□□ -2.41
KRT39Q6A163 AC145423.2-201ENST00000610631 239 ntBASIC-0.01□□□□□ -2.41
KRT39Q6A163 U6.81-201ENST00000612550 106 ntBASIC-0.01□□□□□ -2.41
KRT39Q6A163 RNA5SP457-201ENST00000363657 124 ntBASIC-0.02□□□□□ -2.41
KRT39Q6A163 RNY4P3-201ENST00000365254 95 ntBASIC-0.02□□□□□ -2.41
KRT39Q6A163 MIR892B-201ENST00000401279 77 ntBASIC-0.02□□□□□ -2.41
KRT39Q6A163 RNU7-24P-201ENST00000458867 62 ntBASIC-0.02□□□□□ -2.41
KRT39Q6A163 RNU7-159P-201ENST00000459284 62 ntBASIC-0.02□□□□□ -2.41
KRT39Q6A163 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
KRT39Q6A163 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.02□□□□□ -2.41
KRT39Q6A163 CR383656.4-201ENST00000546909 122 ntBASIC-0.02□□□□□ -2.41
KRT39Q6A163 AC140658.3-201ENST00000567603 271 ntBASIC-0.02□□□□□ -2.41
KRT39Q6A163 MIR5582-201ENST00000579697 68 ntBASIC-0.02□□□□□ -2.41
KRT39Q6A163 AC006160.2-201ENST00000637708 154 ntBASIC-0.02□□□□□ -2.41
KRT39Q6A163 MIR148A-201ENST00000362215 68 ntBASIC-0.03□□□□□ -2.41
KRT39Q6A163 MIR20A-201ENST00000362279 71 ntBASIC-0.03□□□□□ -2.41
KRT39Q6A163 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.03□□□□□ -2.41
KRT39Q6A163 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.03□□□□□ -2.41
KRT39Q6A163 AC244090.1-201ENST00000441884 93 ntBASIC-0.03□□□□□ -2.41
KRT39Q6A163 AC093729.1-201ENST00000513074 128 ntBASIC-0.03□□□□□ -2.41
KRT39Q6A163 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.03□□□□□ -2.41
KRT39Q6A163 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.03□□□□□ -2.41
KRT39Q6A163 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.03□□□□□ -2.41
KRT39Q6A163 MIR6507-201ENST00000613630 70 ntBASIC-0.03□□□□□ -2.41
KRT39Q6A163 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.03□□□□□ -2.41
KRT39Q6A163 MIR4773-1-201ENST00000637203 78 ntBASIC-0.03□□□□□ -2.41
KRT39Q6A163 RNU6-208P-201ENST00000362431 107 ntBASIC-0.04□□□□□ -2.42
KRT39Q6A163 RNU6-624P-201ENST00000363411 107 ntBASIC-0.04□□□□□ -2.42
KRT39Q6A163 AC244250.2-201ENST00000418731 148 ntBASIC-0.04□□□□□ -2.42
KRT39Q6A163 AL450471.1-201ENST00000447509 127 ntBASIC-0.04□□□□□ -2.42
KRT39Q6A163 RNA5SP257-201ENST00000363023 116 ntBASIC-0.05□□□□□ -2.42
KRT39Q6A163 SNORD115-37-201ENST00000363768 82 ntBASIC-0.05□□□□□ -2.42
KRT39Q6A163 RNU6-478P-201ENST00000363904 110 ntBASIC-0.05□□□□□ -2.42
KRT39Q6A163 RNU6-294P-201ENST00000364999 102 ntBASIC-0.05□□□□□ -2.42
KRT39Q6A163 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.05□□□□□ -2.42
KRT39Q6A163 SNORD77.2-201ENST00000391045 68 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 201 ms