Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNU6-248P-201ENST00000410720 107 ntBASIC-2.06□□□□□ -2.74
VPS13DQ5THJ4 MIR4426-201ENST00000640330 63 ntBASIC-2.06□□□□□ -2.74
VPS13DQ5THJ4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-2.07□□□□□ -2.74
VPS13DQ5THJ4 MIR5701-3-201ENST00000578890 82 ntBASIC-2.07□□□□□ -2.74
VPS13DQ5THJ4 MIR5701-1-201ENST00000585138 82 ntBASIC-2.07□□□□□ -2.74
VPS13DQ5THJ4 MIR5701-2-201ENST00000615634 82 ntBASIC-2.07□□□□□ -2.74
VPS13DQ5THJ4 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.07□□□□□ -2.74
VPS13DQ5THJ4 RNU6-1252P-201ENST00000363054 104 ntBASIC-2.07□□□□□ -2.74
VPS13DQ5THJ4 AC073114.1-201ENST00000612027 490 ntBASIC-2.07□□□□□ -2.74
VPS13DQ5THJ4 AC006927.3-201ENST00000638789 384 ntBASIC-2.07□□□□□ -2.74
VPS13DQ5THJ4 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.08□□□□□ -2.74
VPS13DQ5THJ4 RNU6-1059P-201ENST00000363752 98 ntBASIC-2.08□□□□□ -2.74
VPS13DQ5THJ4 RNU6-867P-201ENST00000364956 107 ntBASIC-2.08□□□□□ -2.74
VPS13DQ5THJ4 RNU6-1148P-201ENST00000410992 104 ntBASIC-2.08□□□□□ -2.74
VPS13DQ5THJ4 CCDC34P1-201ENST00000507441 517 ntBASIC-2.08□□□□□ -2.74
VPS13DQ5THJ4 RNU6-520P-201ENST00000384717 104 ntBASIC-2.08□□□□□ -2.74
VPS13DQ5THJ4 MT-TH-201ENST00000387441 69 ntBASIC-2.08□□□□□ -2.74
VPS13DQ5THJ4 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.08□□□□□ -2.74
VPS13DQ5THJ4 ZNF519P2-201ENST00000557032 169 ntBASIC-2.08□□□□□ -2.74
VPS13DQ5THJ4 RNU6-1090P-201ENST00000364065 94 ntBASIC-2.09□□□□□ -2.74
VPS13DQ5THJ4 Y_RNA.605-201ENST00000410577 105 ntBASIC-2.09□□□□□ -2.74
VPS13DQ5THJ4 MTND2P39-201ENST00000457230 764 ntBASIC-2.09□□□□□ -2.74
VPS13DQ5THJ4 U8.20-201ENST00000459445 131 ntBASIC-2.09□□□□□ -2.74
VPS13DQ5THJ4 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.09□□□□□ -2.74
VPS13DQ5THJ4 RNU6-162P-201ENST00000516228 103 ntBASIC-2.09□□□□□ -2.74
VPS13DQ5THJ4 RNU6-267P-201ENST00000516714 103 ntBASIC-2.09□□□□□ -2.74
VPS13DQ5THJ4 MIR3662-201ENST00000637030 95 ntBASIC-2.09□□□□□ -2.74
VPS13DQ5THJ4 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.09□□□□□ -2.74
VPS13DQ5THJ4 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.09□□□□□ -2.74
VPS13DQ5THJ4 RNU6-306P-201ENST00000384617 107 ntBASIC-2.09□□□□□ -2.74
VPS13DQ5THJ4 Y_RNA.772-201ENST00000606692 102 ntBASIC-2.09□□□□□ -2.74
VPS13DQ5THJ4 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.1□□□□□ -2.74
VPS13DQ5THJ4 RNU6-1050P-201ENST00000410388 107 ntBASIC-2.1□□□□□ -2.74
VPS13DQ5THJ4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.1□□□□□ -2.74
VPS13DQ5THJ4 Y_RNA.592-201ENST00000410274 109 ntBASIC-2.1□□□□□ -2.75
VPS13DQ5THJ4 RNA5SP401-201ENST00000515920 127 ntBASIC-2.1□□□□□ -2.75
VPS13DQ5THJ4 RNU6-264P-201ENST00000517134 104 ntBASIC-2.1□□□□□ -2.75
VPS13DQ5THJ4 MIR122-201ENST00000385044 85 ntBASIC-2.1□□□□□ -2.75
VPS13DQ5THJ4 RNU6-373P-201ENST00000411247 98 ntBASIC-2.1□□□□□ -2.75
VPS13DQ5THJ4 MTND2P30-201ENST00000456663 382 ntBASIC-2.1□□□□□ -2.75
VPS13DQ5THJ4 MT-TI-201ENST00000387365 69 ntBASIC-2.1□□□□□ -2.75
VPS13DQ5THJ4 RNU6-982P-201ENST00000516216 102 ntBASIC-2.1□□□□□ -2.75
VPS13DQ5THJ4 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.11□□□□□ -2.75
VPS13DQ5THJ4 AL450471.1-201ENST00000447509 127 ntBASIC-2.11□□□□□ -2.75
VPS13DQ5THJ4 RNU6-916P-201ENST00000516088 109 ntBASIC-2.11□□□□□ -2.75
VPS13DQ5THJ4 RNU6-334P-201ENST00000517072 102 ntBASIC-2.11□□□□□ -2.75
VPS13DQ5THJ4 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.11□□□□□ -2.75
VPS13DQ5THJ4 Y_RNA.813-201ENST00000364639 102 ntBASIC-2.11□□□□□ -2.75
VPS13DQ5THJ4 RNU6-972P-201ENST00000391208 107 ntBASIC-2.11□□□□□ -2.75
VPS13DQ5THJ4 MIR7978-201ENST00000636158 59 ntBASIC-2.11□□□□□ -2.75
VPS13DQ5THJ4 RNU6-593P-201ENST00000364716 112 ntBASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 MIR6128-201ENST00000615528 109 ntBASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 SNORD116-10-201ENST00000363791 102 ntBASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 RNU6-261P-201ENST00000459506 102 ntBASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 AC062037.1-201ENST00000605302 128 ntBASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 DLEU2_1.2-201ENST00000614667 120 ntBASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 RNU6-662P-201ENST00000384253 104 ntBASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 RNU6-422P-201ENST00000384632 107 ntBASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 Y_RNA.713-201ENST00000517013 96 ntBASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 MIR4317-201ENST00000637586 65 ntBASIC-2.12□□□□□ -2.75
VPS13DQ5THJ4 SNORA63-201ENST00000363450 132 ntBASIC-2.13□□□□□ -2.75
VPS13DQ5THJ4 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.13□□□□□ -2.75
VPS13DQ5THJ4 RNU6-120P-201ENST00000516077 103 ntBASIC-2.13□□□□□ -2.75
VPS13DQ5THJ4 RNY4P20-201ENST00000516678 93 ntBASIC-2.13□□□□□ -2.75
VPS13DQ5THJ4 AC020661.2-201ENST00000560114 134 ntBASIC-2.13□□□□□ -2.75
VPS13DQ5THJ4 SNORD116-1-201ENST00000384335 95 ntBASIC-2.13□□□□□ -2.75
VPS13DQ5THJ4 MIR616-201ENST00000385293 97 ntBASIC-2.13□□□□□ -2.75
VPS13DQ5THJ4 RNU6-644P-201ENST00000391155 98 ntBASIC-2.13□□□□□ -2.75
VPS13DQ5THJ4 RNA5SP215-201ENST00000363440 122 ntBASIC-2.13□□□□□ -2.75
VPS13DQ5THJ4 RNU6-211P-201ENST00000384047 107 ntBASIC-2.13□□□□□ -2.75
VPS13DQ5THJ4 RNU6-99P-201ENST00000364721 107 ntBASIC-2.14□□□□□ -2.75
VPS13DQ5THJ4 Y_RNA.530-201ENST00000384587 101 ntBASIC-2.14□□□□□ -2.75
VPS13DQ5THJ4 RNU6-1158P-201ENST00000391167 107 ntBASIC-2.14□□□□□ -2.75
VPS13DQ5THJ4 SNORD18B-201ENST00000365659 72 ntBASIC-2.14□□□□□ -2.75
VPS13DQ5THJ4 SNORA40.3-201ENST00000390964 122 ntBASIC-2.14□□□□□ -2.75
VPS13DQ5THJ4 MIR1236-201ENST00000408340 102 ntBASIC-2.14□□□□□ -2.75
VPS13DQ5THJ4 SNORD45.1-201ENST00000363181 77 ntBASIC-2.14□□□□□ -2.75
VPS13DQ5THJ4 RNU6-103P-201ENST00000363686 107 ntBASIC-2.15□□□□□ -2.75
VPS13DQ5THJ4 RNU6-755P-201ENST00000364400 103 ntBASIC-2.15□□□□□ -2.75
VPS13DQ5THJ4 SNORD115-45-201ENST00000391078 81 ntBASIC-2.15□□□□□ -2.75
VPS13DQ5THJ4 RNU6-507P-201ENST00000516045 100 ntBASIC-2.15□□□□□ -2.75
VPS13DQ5THJ4 MIR4439-201ENST00000583746 80 ntBASIC-2.15□□□□□ -2.75
VPS13DQ5THJ4 MIR3658-201ENST00000636291 56 ntBASIC-2.15□□□□□ -2.75
VPS13DQ5THJ4 SNORA25.1-201ENST00000362326 128 ntBASIC-2.15□□□□□ -2.75
VPS13DQ5THJ4 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.15□□□□□ -2.75
VPS13DQ5THJ4 MIR4744-201ENST00000581563 82 ntBASIC-2.15□□□□□ -2.75
VPS13DQ5THJ4 MIR1255B1-201ENST00000636325 63 ntBASIC-2.15□□□□□ -2.75
VPS13DQ5THJ4 RNU6-297P-201ENST00000384636 107 ntBASIC-2.16□□□□□ -2.75
VPS13DQ5THJ4 RNU6-332P-201ENST00000391193 108 ntBASIC-2.16□□□□□ -2.75
VPS13DQ5THJ4 MIR548Z-201ENST00000584743 97 ntBASIC-2.16□□□□□ -2.75
VPS13DQ5THJ4 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.16□□□□□ -2.75
VPS13DQ5THJ4 MIR376A1-201ENST00000616574 68 ntBASIC-2.16□□□□□ -2.75
VPS13DQ5THJ4 SNORD113-8-201ENST00000363497 74 ntBASIC-2.16□□□□□ -2.76
VPS13DQ5THJ4 AL121914.1-201ENST00000450188 156 ntBASIC-2.16□□□□□ -2.76
VPS13DQ5THJ4 AC025253.1-201ENST00000613623 543 ntBASIC-2.16□□□□□ -2.76
VPS13DQ5THJ4 RNU6-854P-201ENST00000364036 107 ntBASIC-2.16□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 241.6 ms