Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.78□□□□□ -2.12
RC3H1Q5TC82 SNORD113-2-201ENST00000391082 72 ntBASIC1.78□□□□□ -2.12
RC3H1Q5TC82 snoU13.13-201ENST00000458842 104 ntBASIC1.78□□□□□ -2.12
RC3H1Q5TC82 RNU5B-6P-201ENST00000516765 68 ntBASIC1.78□□□□□ -2.12
RC3H1Q5TC82 MIR6078-201ENST00000611069 100 ntBASIC1.78□□□□□ -2.12
RC3H1Q5TC82 MIR96-201ENST00000362288 78 ntBASIC1.77□□□□□ -2.13
RC3H1Q5TC82 RNU6-42P-201ENST00000384165 107 ntBASIC1.77□□□□□ -2.13
RC3H1Q5TC82 RNU6-698P-201ENST00000363523 107 ntBASIC1.76□□□□□ -2.13
RC3H1Q5TC82 SNORD18A-201ENST00000363753 72 ntBASIC1.76□□□□□ -2.13
RC3H1Q5TC82 RNU6-34P-201ENST00000364874 107 ntBASIC1.76□□□□□ -2.13
RC3H1Q5TC82 RNU7-174P-201ENST00000516248 59 ntBASIC1.76□□□□□ -2.13
RC3H1Q5TC82 RNA5SP47-201ENST00000517230 109 ntBASIC1.76□□□□□ -2.13
RC3H1Q5TC82 MIR3660-201ENST00000584845 100 ntBASIC1.76□□□□□ -2.13
RC3H1Q5TC82 RNU6-1312P-201ENST00000362425 108 ntBASIC1.75□□□□□ -2.13
RC3H1Q5TC82 RNU6-716P-201ENST00000365621 103 ntBASIC1.75□□□□□ -2.13
RC3H1Q5TC82 SNORA8.2-201ENST00000384372 139 ntBASIC1.75□□□□□ -2.13
RC3H1Q5TC82 AC002429.1-201ENST00000437672 148 ntBASIC1.75□□□□□ -2.13
RC3H1Q5TC82 RNA5SP220-201ENST00000516298 104 ntBASIC1.75□□□□□ -2.13
RC3H1Q5TC82 U2.7-201ENST00000619197 100 ntBASIC1.75□□□□□ -2.13
RC3H1Q5TC82 RNU1-93P-201ENST00000364704 169 ntBASIC1.74□□□□□ -2.13
RC3H1Q5TC82 SNORA15B-2-201ENST00000384058 135 ntBASIC1.74□□□□□ -2.13
RC3H1Q5TC82 SNORA15B-1-201ENST00000384334 135 ntBASIC1.74□□□□□ -2.13
RC3H1Q5TC82 RNU6-269P-201ENST00000391077 97 ntBASIC1.74□□□□□ -2.13
RC3H1Q5TC82 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.74□□□□□ -2.13
RC3H1Q5TC82 RNA5SP363-201ENST00000365072 115 ntBASIC1.73□□□□□ -2.13
RC3H1Q5TC82 RNU6-520P-201ENST00000384717 104 ntBASIC1.73□□□□□ -2.13
RC3H1Q5TC82 Y_RNA.633-201ENST00000459107 95 ntBASIC1.73□□□□□ -2.13
RC3H1Q5TC82 AC021146.9-201ENST00000512503 156 ntBASIC1.73□□□□□ -2.13
RC3H1Q5TC82 RNU6-1110P-201ENST00000516462 101 ntBASIC1.73□□□□□ -2.13
RC3H1Q5TC82 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.73□□□□□ -2.13
RC3H1Q5TC82 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.73□□□□□ -2.13
RC3H1Q5TC82 SNORD89-201ENST00000390981 114 ntBASIC1.72□□□□□ -2.13
RC3H1Q5TC82 U4.4-201ENST00000620626 117 ntBASIC1.72□□□□□ -2.13
RC3H1Q5TC82 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.72□□□□□ -2.13
RC3H1Q5TC82 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RC3H1Q5TC82 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
RC3H1Q5TC82 SNORD105-201ENST00000386910 85 ntBASIC1.71□□□□□ -2.14
RC3H1Q5TC82 RPS29P23-201ENST00000458635 123 ntBASIC1.71□□□□□ -2.14
RC3H1Q5TC82 RNA5SP484-201ENST00000458857 111 ntBASIC1.71□□□□□ -2.14
RC3H1Q5TC82 uc_338.10-201ENST00000621872 182 ntBASIC1.71□□□□□ -2.14
RC3H1Q5TC82 MIR320A-201ENST00000385302 82 ntBASIC1.7□□□□□ -2.14
RC3H1Q5TC82 MIR3678-201ENST00000578455 94 ntBASIC1.7□□□□□ -2.14
RC3H1Q5TC82 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RC3H1Q5TC82 Y_RNA.125-201ENST00000363371 111 ntBASIC1.69□□□□□ -2.14
RC3H1Q5TC82 SNORA33.1-201ENST00000364957 130 ntBASIC1.69□□□□□ -2.14
RC3H1Q5TC82 MIR222-201ENST00000384992 110 ntBASIC1.69□□□□□ -2.14
RC3H1Q5TC82 MIR758-201ENST00000390227 88 ntBASIC1.69□□□□□ -2.14
RC3H1Q5TC82 RNU4-88P-201ENST00000411220 86 ntBASIC1.69□□□□□ -2.14
RC3H1Q5TC82 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RC3H1Q5TC82 SCARNA16.5-201ENST00000517114 183 ntBASIC1.68□□□□□ -2.14
RC3H1Q5TC82 AC022709.1-201ENST00000615967 87 ntBASIC1.68□□□□□ -2.14
RC3H1Q5TC82 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
RC3H1Q5TC82 Y_RNA.379-201ENST00000365653 102 ntBASIC1.67□□□□□ -2.14
RC3H1Q5TC82 U7.7-201ENST00000459276 60 ntBASIC1.67□□□□□ -2.14
RC3H1Q5TC82 MIR548AD-201ENST00000584780 82 ntBASIC1.67□□□□□ -2.14
RC3H1Q5TC82 SCARNA17.3-201ENST00000516381 125 ntBASIC1.66□□□□□ -2.14
RC3H1Q5TC82 AL162376.1-201ENST00000624117 175 ntBASIC1.66□□□□□ -2.14
RC3H1Q5TC82 SNORA63.6-201ENST00000364921 119 ntBASIC1.65□□□□□ -2.15
RC3H1Q5TC82 FABP5P4-201ENST00000437203 171 ntBASIC1.65□□□□□ -2.15
RC3H1Q5TC82 MIR6734-201ENST00000621166 68 ntBASIC1.65□□□□□ -2.15
RC3H1Q5TC82 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
RC3H1Q5TC82 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RC3H1Q5TC82 Y_RNA.407-201ENST00000383986 113 ntBASIC1.64□□□□□ -2.15
RC3H1Q5TC82 SNORA25-201ENST00000384384 134 ntBASIC1.64□□□□□ -2.15
RC3H1Q5TC82 MIR652-201ENST00000385278 98 ntBASIC1.64□□□□□ -2.15
RC3H1Q5TC82 MIR3612-201ENST00000579753 87 ntBASIC1.64□□□□□ -2.15
RC3H1Q5TC82 MIR573-201ENST00000384964 99 ntBASIC1.63□□□□□ -2.15
RC3H1Q5TC82 RNU7-119P-201ENST00000459279 63 ntBASIC1.63□□□□□ -2.15
RC3H1Q5TC82 Y_RNA.246-201ENST00000364495 108 ntBASIC1.62□□□□□ -2.15
RC3H1Q5TC82 SNORA41B-201ENST00000384785 128 ntBASIC1.62□□□□□ -2.15
RC3H1Q5TC82 MIR520E-201ENST00000384867 87 ntBASIC1.62□□□□□ -2.15
RC3H1Q5TC82 MIR6828-201ENST00000636181 60 ntBASIC1.62□□□□□ -2.15
RC3H1Q5TC82 RNU6-753P-201ENST00000363926 107 ntBASIC1.61□□□□□ -2.15
RC3H1Q5TC82 MIR6767-201ENST00000637302 66 ntBASIC1.61□□□□□ -2.15
RC3H1Q5TC82 Y_RNA.325-201ENST00000365171 122 ntBASIC1.6□□□□□ -2.15
RC3H1Q5TC82 MIR582-201ENST00000365731 98 ntBASIC1.6□□□□□ -2.15
RC3H1Q5TC82 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
RC3H1Q5TC82 RNA5SP327-201ENST00000362494 101 ntBASIC1.59□□□□□ -2.15
RC3H1Q5TC82 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.59□□□□□ -2.16
RC3H1Q5TC82 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
RC3H1Q5TC82 MIR548E-201ENST00000408287 88 ntBASIC1.58□□□□□ -2.16
RC3H1Q5TC82 RNA5SP480-201ENST00000516840 109 ntBASIC1.58□□□□□ -2.16
RC3H1Q5TC82 MIR548AE1-201ENST00000583292 70 ntBASIC1.58□□□□□ -2.16
RC3H1Q5TC82 SNORA25.8-201ENST00000364831 128 ntBASIC1.57□□□□□ -2.16
RC3H1Q5TC82 MIR150-201ENST00000385048 84 ntBASIC1.57□□□□□ -2.16
RC3H1Q5TC82 RNA5SP227-201ENST00000516184 113 ntBASIC1.57□□□□□ -2.16
RC3H1Q5TC82 RNA5SP61-201ENST00000516453 100 ntBASIC1.57□□□□□ -2.16
RC3H1Q5TC82 CYP3A54P-201ENST00000566950 75 ntBASIC1.57□□□□□ -2.16
RC3H1Q5TC82 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.57□□□□□ -2.16
RC3H1Q5TC82 SNORD26-201ENST00000384147 75 ntBASIC1.56□□□□□ -2.16
RC3H1Q5TC82 MIR19B1-201ENST00000384829 87 ntBASIC1.56□□□□□ -2.16
RC3H1Q5TC82 RNU6-980P-201ENST00000516925 103 ntBASIC1.56□□□□□ -2.16
RC3H1Q5TC82 RNU6-231P-201ENST00000517122 103 ntBASIC1.56□□□□□ -2.16
RC3H1Q5TC82 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.56□□□□□ -2.16
RC3H1Q5TC82 SNORA9.1-201ENST00000362412 131 ntBASIC1.55□□□□□ -2.16
RC3H1Q5TC82 SNORD114-27-201ENST00000363766 70 ntBASIC1.55□□□□□ -2.16
RC3H1Q5TC82 SNORD110-201ENST00000408189 75 ntBASIC1.55□□□□□ -2.16
RC3H1Q5TC82 AC006210.1-201ENST00000424882 111 ntBASIC1.55□□□□□ -2.16
RC3H1Q5TC82 RPS29P1-201ENST00000465274 159 ntBASIC1.55□□□□□ -2.16
RC3H1Q5TC82 MIR4473-201ENST00000583731 91 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 241.5 ms