Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNU5B-6P-201ENST00000516765 68 ntBASIC1.09□□□□□ -2.23
PCDH1Q08174 MIR7107-201ENST00000611489 80 ntBASIC1.09□□□□□ -2.23
PCDH1Q08174 AC073869.9-201ENST00000641610 120 ntBASIC1.09□□□□□ -2.23
PCDH1Q08174 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
PCDH1Q08174 MIR96-201ENST00000362288 78 ntBASIC1.08□□□□□ -2.24
PCDH1Q08174 SNORD113.1-201ENST00000363280 73 ntBASIC1.08□□□□□ -2.24
PCDH1Q08174 RPS29P1-201ENST00000465274 159 ntBASIC1.07□□□□□ -2.24
PCDH1Q08174 MIR3657-201ENST00000584818 117 ntBASIC1.07□□□□□ -2.24
PCDH1Q08174 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
PCDH1Q08174 SNORD114-4-201ENST00000363962 75 ntBASIC1.06□□□□□ -2.24
PCDH1Q08174 SNORA36.2-201ENST00000384004 127 ntBASIC1.06□□□□□ -2.24
PCDH1Q08174 RNU6-260P-201ENST00000384092 107 ntBASIC1.06□□□□□ -2.24
PCDH1Q08174 RNU6-1216P-201ENST00000362590 107 ntBASIC1.05□□□□□ -2.24
PCDH1Q08174 RNY1P8-201ENST00000383970 114 ntBASIC1.05□□□□□ -2.24
PCDH1Q08174 RNU6-800P-201ENST00000384473 103 ntBASIC1.05□□□□□ -2.24
PCDH1Q08174 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
PCDH1Q08174 RNA5SP480-201ENST00000516840 109 ntBASIC1.05□□□□□ -2.24
PCDH1Q08174 AC018659.1-201ENST00000551083 169 ntBASIC1.05□□□□□ -2.24
PCDH1Q08174 MIR6515-201ENST00000619843 57 ntBASIC1.05□□□□□ -2.24
PCDH1Q08174 Y_RNA.386-201ENST00000383913 105 ntBASIC1.04□□□□□ -2.24
PCDH1Q08174 MIR520E-201ENST00000384867 87 ntBASIC1.04□□□□□ -2.24
PCDH1Q08174 AC006210.1-201ENST00000424882 111 ntBASIC1.04□□□□□ -2.24
PCDH1Q08174 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
PCDH1Q08174 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
PCDH1Q08174 MIR608-201ENST00000384820 100 ntBASIC1.03□□□□□ -2.24
PCDH1Q08174 MIR140-201ENST00000385282 100 ntBASIC1.03□□□□□ -2.24
PCDH1Q08174 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
PCDH1Q08174 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
PCDH1Q08174 SNORA2.1-201ENST00000363089 137 ntBASIC1.02□□□□□ -2.25
PCDH1Q08174 RNU6-990P-201ENST00000364385 104 ntBASIC1.02□□□□□ -2.25
PCDH1Q08174 RNU6-630P-201ENST00000391258 106 ntBASIC1.02□□□□□ -2.25
PCDH1Q08174 SNORD110-201ENST00000408189 75 ntBASIC1.02□□□□□ -2.25
PCDH1Q08174 AC125388.1-201ENST00000459631 156 ntBASIC1.02□□□□□ -2.25
PCDH1Q08174 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
PCDH1Q08174 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.02□□□□□ -2.25
PCDH1Q08174 RNA5SP517-201ENST00000364724 117 ntBASIC1.01□□□□□ -2.25
PCDH1Q08174 SNORD116-24-201ENST00000384549 92 ntBASIC1.01□□□□□ -2.25
PCDH1Q08174 RNU6-982P-201ENST00000516216 102 ntBASIC1.01□□□□□ -2.25
PCDH1Q08174 Y_RNA.340-201ENST00000365330 92 ntBASIC1□□□□□ -2.25
PCDH1Q08174 Y_RNA.407-201ENST00000383986 113 ntBASIC1□□□□□ -2.25
PCDH1Q08174 Y_RNA.443-201ENST00000384135 111 ntBASIC1□□□□□ -2.25
PCDH1Q08174 SNORA40.17-201ENST00000517256 115 ntBASIC1□□□□□ -2.25
PCDH1Q08174 AC005520.4-201ENST00000604337 90 ntBASIC1□□□□□ -2.25
PCDH1Q08174 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
PCDH1Q08174 AC092634.7-201ENST00000621022 103 ntBASIC0.99□□□□□ -2.25
PCDH1Q08174 RNA5SP325-201ENST00000363756 130 ntBASIC0.98□□□□□ -2.25
PCDH1Q08174 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
PCDH1Q08174 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
PCDH1Q08174 MTND4LP1-201ENST00000446263 157 ntBASIC0.98□□□□□ -2.25
PCDH1Q08174 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
PCDH1Q08174 RNA5SP147-201ENST00000516493 109 ntBASIC0.98□□□□□ -2.25
PCDH1Q08174 MIR4752-201ENST00000579672 72 ntBASIC0.98□□□□□ -2.25
PCDH1Q08174 SNORA70.25-201ENST00000612741 95 ntBASIC0.98□□□□□ -2.25
PCDH1Q08174 AC022709.1-201ENST00000615967 87 ntBASIC0.98□□□□□ -2.25
PCDH1Q08174 SNORA25.4-201ENST00000363666 124 ntBASIC0.97□□□□□ -2.25
PCDH1Q08174 MIR4473-201ENST00000583731 91 ntBASIC0.97□□□□□ -2.25
PCDH1Q08174 RNU1-93P-201ENST00000364704 169 ntBASIC0.96□□□□□ -2.26
PCDH1Q08174 MIR1265-201ENST00000408444 86 ntBASIC0.96□□□□□ -2.26
PCDH1Q08174 MIR151B-201ENST00000584249 96 ntBASIC0.96□□□□□ -2.26
PCDH1Q08174 SNORA25.18-201ENST00000607153 114 ntBASIC0.96□□□□□ -2.26
PCDH1Q08174 MIR6779-201ENST00000617283 64 ntBASIC0.96□□□□□ -2.26
PCDH1Q08174 Y_RNA.250-201ENST00000364542 110 ntBASIC0.95□□□□□ -2.26
PCDH1Q08174 RNU6-645P-201ENST00000364649 106 ntBASIC0.95□□□□□ -2.26
PCDH1Q08174 MIR652-201ENST00000385278 98 ntBASIC0.95□□□□□ -2.26
PCDH1Q08174 MIR548J-201ENST00000408833 112 ntBASIC0.95□□□□□ -2.26
PCDH1Q08174 SCARNA17.3-201ENST00000516381 125 ntBASIC0.95□□□□□ -2.26
PCDH1Q08174 MIR548AE1-201ENST00000583292 70 ntBASIC0.95□□□□□ -2.26
PCDH1Q08174 SNORD118-201ENST00000363593 134 ntBASIC0.94□□□□□ -2.26
PCDH1Q08174 RNU6-668P-201ENST00000364180 107 ntBASIC0.94□□□□□ -2.26
PCDH1Q08174 RNU6-110P-201ENST00000384508 104 ntBASIC0.94□□□□□ -2.26
PCDH1Q08174 AC069271.1-201ENST00000445577 156 ntBASIC0.94□□□□□ -2.26
PCDH1Q08174 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
PCDH1Q08174 RNU6-1223P-201ENST00000517124 104 ntBASIC0.94□□□□□ -2.26
PCDH1Q08174 MIR6788-201ENST00000618842 66 ntBASIC0.94□□□□□ -2.26
PCDH1Q08174 PVT1_3.1-201ENST00000620853 95 ntBASIC0.94□□□□□ -2.26
PCDH1Q08174 RNU6-471P-201ENST00000383944 106 ntBASIC0.93□□□□□ -2.26
PCDH1Q08174 MIR598-201ENST00000384868 97 ntBASIC0.93□□□□□ -2.26
PCDH1Q08174 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.93□□□□□ -2.26
PCDH1Q08174 SNORA40.8-201ENST00000411034 126 ntBASIC0.93□□□□□ -2.26
PCDH1Q08174 RNA5SP436-201ENST00000516020 115 ntBASIC0.93□□□□□ -2.26
PCDH1Q08174 MIR5706-201ENST00000579841 80 ntBASIC0.93□□□□□ -2.26
PCDH1Q08174 AC211469.2-201ENST00000605461 205 ntBASIC0.93□□□□□ -2.26
PCDH1Q08174 RNU1-29P-201ENST00000606574 126 ntBASIC0.93□□□□□ -2.26
PCDH1Q08174 MIR6739-201ENST00000622461 75 ntBASIC0.93□□□□□ -2.26
PCDH1Q08174 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
PCDH1Q08174 Y_RNA.205-201ENST00000364128 113 ntBASIC0.91□□□□□ -2.26
PCDH1Q08174 MIR532-201ENST00000385025 91 ntBASIC0.91□□□□□ -2.26
PCDH1Q08174 SNORD71-201ENST00000411292 86 ntBASIC0.91□□□□□ -2.26
PCDH1Q08174 MIR6767-201ENST00000637302 66 ntBASIC0.91□□□□□ -2.26
PCDH1Q08174 Y_RNA.540-201ENST00000384638 111 ntBASIC0.9□□□□□ -2.27
PCDH1Q08174 HMGN2P22-201ENST00000427588 175 ntBASIC0.9□□□□□ -2.27
PCDH1Q08174 AC021146.9-201ENST00000512503 156 ntBASIC0.9□□□□□ -2.27
PCDH1Q08174 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
PCDH1Q08174 AL590095.2-201ENST00000604136 117 ntBASIC0.9□□□□□ -2.27
PCDH1Q08174 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
PCDH1Q08174 uc_338.10-201ENST00000621872 182 ntBASIC0.9□□□□□ -2.27
PCDH1Q08174 snoU13.13-201ENST00000458842 104 ntBASIC0.89□□□□□ -2.27
PCDH1Q08174 RNU6-656P-201ENST00000516785 107 ntBASIC0.89□□□□□ -2.27
PCDH1Q08174 AL109933.3-201ENST00000619095 188 ntBASIC0.89□□□□□ -2.27
PCDH1Q08174 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 232.9 ms