Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC103810.7-201ENST00000607821 91 ntBASIC-0.98□□□□□ -2.57
SCN1BQ07699 MIR4320-201ENST00000636981 65 ntBASIC-0.98□□□□□ -2.57
SCN1BQ07699 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.99□□□□□ -2.57
SCN1BQ07699 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.99□□□□□ -2.57
SCN1BQ07699 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.99□□□□□ -2.57
SCN1BQ07699 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.99□□□□□ -2.57
SCN1BQ07699 MIR196A1-201ENST00000388006 70 ntBASIC-0.99□□□□□ -2.57
SCN1BQ07699 MIR548U-201ENST00000390728 81 ntBASIC-0.99□□□□□ -2.57
SCN1BQ07699 RNU6-255P-201ENST00000516957 105 ntBASIC-0.99□□□□□ -2.57
SCN1BQ07699 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.99□□□□□ -2.57
SCN1BQ07699 RNU6-813P-201ENST00000384691 107 ntBASIC-1□□□□□ -2.57
SCN1BQ07699 RNU6-644P-201ENST00000391155 98 ntBASIC-1□□□□□ -2.57
SCN1BQ07699 MIR4280-201ENST00000582178 76 ntBASIC-1□□□□□ -2.57
SCN1BQ07699 RNA5SP331-201ENST00000364986 107 ntBASIC-1.01□□□□□ -2.57
SCN1BQ07699 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.01□□□□□ -2.57
SCN1BQ07699 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.01□□□□□ -2.57
SCN1BQ07699 SNORD38.3-201ENST00000516599 73 ntBASIC-1.01□□□□□ -2.57
SCN1BQ07699 MIR3064-201ENST00000581130 66 ntBASIC-1.01□□□□□ -2.57
SCN1BQ07699 MIR6851-201ENST00000617060 67 ntBASIC-1.01□□□□□ -2.57
SCN1BQ07699 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.02□□□□□ -2.57
SCN1BQ07699 RNY1P5-201ENST00000383890 115 ntBASIC-1.02□□□□□ -2.57
SCN1BQ07699 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.02□□□□□ -2.57
SCN1BQ07699 MIR548A3-201ENST00000385297 97 ntBASIC-1.02□□□□□ -2.57
SCN1BQ07699 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.02□□□□□ -2.57
SCN1BQ07699 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.02□□□□□ -2.57
SCN1BQ07699 SNORA63.2-201ENST00000362603 126 ntBASIC-1.03□□□□□ -2.57
SCN1BQ07699 RNU6-973P-201ENST00000364690 107 ntBASIC-1.03□□□□□ -2.57
SCN1BQ07699 RNU6-80P-201ENST00000384195 107 ntBASIC-1.03□□□□□ -2.57
SCN1BQ07699 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.03□□□□□ -2.57
SCN1BQ07699 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.03□□□□□ -2.57
SCN1BQ07699 MIR3140-201ENST00000583685 90 ntBASIC-1.03□□□□□ -2.57
SCN1BQ07699 AC104996.3-201ENST00000590718 94 ntBASIC-1.03□□□□□ -2.57
SCN1BQ07699 RNU6-502P-201ENST00000362419 108 ntBASIC-1.04□□□□□ -2.58
SCN1BQ07699 U6.95-201ENST00000636931 70 ntBASIC-1.04□□□□□ -2.58
SCN1BQ07699 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.05□□□□□ -2.58
SCN1BQ07699 RNU6-476P-201ENST00000384726 107 ntBASIC-1.05□□□□□ -2.58
SCN1BQ07699 AC021146.6-201ENST00000514659 117 ntBASIC-1.05□□□□□ -2.58
SCN1BQ07699 RNU6-881P-201ENST00000516813 102 ntBASIC-1.05□□□□□ -2.58
SCN1BQ07699 MIR548Z-201ENST00000584743 97 ntBASIC-1.05□□□□□ -2.58
SCN1BQ07699 AL627230.5-201ENST00000619807 58 ntBASIC-1.05□□□□□ -2.58
SCN1BQ07699 RNU4-36P-201ENST00000364294 144 ntBASIC-1.06□□□□□ -2.58
SCN1BQ07699 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.06□□□□□ -2.58
SCN1BQ07699 SNORD83B-201ENST00000386745 93 ntBASIC-1.06□□□□□ -2.58
SCN1BQ07699 RNU6-519P-201ENST00000410590 108 ntBASIC-1.06□□□□□ -2.58
SCN1BQ07699 SNORD4B-201ENST00000459083 72 ntBASIC-1.06□□□□□ -2.58
SCN1BQ07699 MIR3115-201ENST00000577915 68 ntBASIC-1.06□□□□□ -2.58
SCN1BQ07699 SNORA63.6-201ENST00000364921 119 ntBASIC-1.07□□□□□ -2.58
SCN1BQ07699 RNU6-795P-201ENST00000516323 103 ntBASIC-1.07□□□□□ -2.58
SCN1BQ07699 MIR4777-201ENST00000583710 86 ntBASIC-1.07□□□□□ -2.58
SCN1BQ07699 RNU6-907P-201ENST00000390924 102 ntBASIC-1.08□□□□□ -2.58
SCN1BQ07699 MIR5704-201ENST00000584029 77 ntBASIC-1.08□□□□□ -2.58
SCN1BQ07699 RNU6-495P-201ENST00000362995 107 ntBASIC-1.09□□□□□ -2.58
SCN1BQ07699 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
SCN1BQ07699 AL078595.1-201ENST00000404458 226 ntBASIC-1.09□□□□□ -2.58
SCN1BQ07699 RNU6-659P-201ENST00000516454 104 ntBASIC-1.09□□□□□ -2.58
SCN1BQ07699 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.1□□□□□ -2.59
SCN1BQ07699 RNU6-24P-201ENST00000384440 107 ntBASIC-1.1□□□□□ -2.59
SCN1BQ07699 SNORA13-201ENST00000458790 133 ntBASIC-1.1□□□□□ -2.59
SCN1BQ07699 AC012531.4-201ENST00000616509 177 ntBASIC-1.1□□□□□ -2.59
SCN1BQ07699 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.11□□□□□ -2.59
SCN1BQ07699 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.11□□□□□ -2.59
SCN1BQ07699 SNX3P1X-201ENST00000414887 175 ntBASIC-1.11□□□□□ -2.59
SCN1BQ07699 MIR6773-201ENST00000612812 74 ntBASIC-1.11□□□□□ -2.59
SCN1BQ07699 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.12□□□□□ -2.59
SCN1BQ07699 SNORA24B-201ENST00000384176 131 ntBASIC-1.12□□□□□ -2.59
SCN1BQ07699 RNA5SP292-201ENST00000390974 118 ntBASIC-1.12□□□□□ -2.59
SCN1BQ07699 MIR1468-201ENST00000410600 86 ntBASIC-1.12□□□□□ -2.59
SCN1BQ07699 RNA5SP461-201ENST00000516451 104 ntBASIC-1.12□□□□□ -2.59
SCN1BQ07699 snoR1.1-201ENST00000628177 80 ntBASIC-1.12□□□□□ -2.59
SCN1BQ07699 RNU6-990P-201ENST00000364385 104 ntBASIC-1.13□□□□□ -2.59
SCN1BQ07699 RNA5SP192-201ENST00000364404 120 ntBASIC-1.13□□□□□ -2.59
SCN1BQ07699 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.13□□□□□ -2.59
SCN1BQ07699 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.13□□□□□ -2.59
SCN1BQ07699 AL500527.2-201ENST00000454105 95 ntBASIC-1.13□□□□□ -2.59
SCN1BQ07699 RNU6-794P-201ENST00000517261 64 ntBASIC-1.13□□□□□ -2.59
SCN1BQ07699 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.14□□□□□ -2.59
SCN1BQ07699 SNORD114-25-201ENST00000363742 72 ntBASIC-1.14□□□□□ -2.59
SCN1BQ07699 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.14□□□□□ -2.59
SCN1BQ07699 RNU6-880P-201ENST00000384526 107 ntBASIC-1.14□□□□□ -2.59
SCN1BQ07699 RNA5SP470-201ENST00000516463 106 ntBASIC-1.14□□□□□ -2.59
SCN1BQ07699 RNU6-62P-201ENST00000516526 102 ntBASIC-1.14□□□□□ -2.59
SCN1BQ07699 MIR518B-201ENST00000385127 83 ntBASIC-1.15□□□□□ -2.59
SCN1BQ07699 SNORD75.2-201ENST00000408784 58 ntBASIC-1.15□□□□□ -2.59
SCN1BQ07699 RNU6-721P-201ENST00000410155 105 ntBASIC-1.15□□□□□ -2.59
SCN1BQ07699 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.15□□□□□ -2.59
SCN1BQ07699 MIR3179-1-201ENST00000578940 84 ntBASIC-1.15□□□□□ -2.59
SCN1BQ07699 MIR3179-2-201ENST00000579107 84 ntBASIC-1.15□□□□□ -2.59
SCN1BQ07699 MIR3179-3-201ENST00000579566 84 ntBASIC-1.15□□□□□ -2.59
SCN1BQ07699 MIR6854-201ENST00000614935 69 ntBASIC-1.15□□□□□ -2.59
SCN1BQ07699 MIR3179-4-201ENST00000617599 84 ntBASIC-1.15□□□□□ -2.59
SCN1BQ07699 MIR601-201ENST00000385256 79 ntBASIC-1.16□□□□□ -2.6
SCN1BQ07699 AC021146.9-201ENST00000512503 156 ntBASIC-1.16□□□□□ -2.6
SCN1BQ07699 SNORA18.5-201ENST00000516616 101 ntBASIC-1.16□□□□□ -2.6
SCN1BQ07699 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.16□□□□□ -2.6
SCN1BQ07699 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.17□□□□□ -2.6
SCN1BQ07699 MIRLET7B-201ENST00000385140 83 ntBASIC-1.17□□□□□ -2.6
SCN1BQ07699 SNORD90-201ENST00000391145 111 ntBASIC-1.17□□□□□ -2.6
SCN1BQ07699 SNORA19.1-201ENST00000410656 129 ntBASIC-1.17□□□□□ -2.6
SCN1BQ07699 MTATP6P29-201ENST00000415057 132 ntBASIC-1.17□□□□□ -2.6
SCN1BQ07699 SNORD22.1-201ENST00000516331 125 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 481.9 ms