Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 MIR5591-201ENST00000578248 65 ntBASIC-1.12□□□□□ -2.59
CNTNAP1P78357 MIR4536-1-201ENST00000583537 88 ntBASIC-1.12□□□□□ -2.59
CNTNAP1P78357 MIR6854-201ENST00000614935 69 ntBASIC-1.12□□□□□ -2.59
CNTNAP1P78357 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.13□□□□□ -2.59
CNTNAP1P78357 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.13□□□□□ -2.59
CNTNAP1P78357 RNU6-200P-201ENST00000364743 107 ntBASIC-1.13□□□□□ -2.59
CNTNAP1P78357 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.13□□□□□ -2.59
CNTNAP1P78357 SNORD50.2-201ENST00000365465 70 ntBASIC-1.13□□□□□ -2.59
CNTNAP1P78357 RNU6-721P-201ENST00000410155 105 ntBASIC-1.13□□□□□ -2.59
CNTNAP1P78357 AC097510.1-201ENST00000510945 133 ntBASIC-1.13□□□□□ -2.59
CNTNAP1P78357 RNA5SP272-201ENST00000516095 111 ntBASIC-1.13□□□□□ -2.59
CNTNAP1P78357 MIR4694-201ENST00000578534 80 ntBASIC-1.13□□□□□ -2.59
CNTNAP1P78357 AC025166.1-201ENST00000612411 163 ntBASIC-1.13□□□□□ -2.59
CNTNAP1P78357 SNORD116-18-201ENST00000383961 92 ntBASIC-1.14□□□□□ -2.59
CNTNAP1P78357 SNORD22.1-201ENST00000516331 125 ntBASIC-1.14□□□□□ -2.59
CNTNAP1P78357 MIR6129-201ENST00000616087 109 ntBASIC-1.14□□□□□ -2.59
CNTNAP1P78357 AC025521.1-201ENST00000621624 286 ntBASIC-1.14□□□□□ -2.59
CNTNAP1P78357 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.15□□□□□ -2.59
CNTNAP1P78357 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.15□□□□□ -2.59
CNTNAP1P78357 MIR577-201ENST00000385196 96 ntBASIC-1.15□□□□□ -2.59
CNTNAP1P78357 RNU6-394P-201ENST00000410735 107 ntBASIC-1.15□□□□□ -2.59
CNTNAP1P78357 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.15□□□□□ -2.59
CNTNAP1P78357 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.15□□□□□ -2.59
CNTNAP1P78357 MIR5704-201ENST00000584029 77 ntBASIC-1.15□□□□□ -2.59
CNTNAP1P78357 SNORD58C-201ENST00000365223 64 ntBASIC-1.16□□□□□ -2.59
CNTNAP1P78357 MIR6773-201ENST00000612812 74 ntBASIC-1.16□□□□□ -2.59
CNTNAP1P78357 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.17□□□□□ -2.6
CNTNAP1P78357 SNORA63.6-201ENST00000364921 119 ntBASIC-1.17□□□□□ -2.6
CNTNAP1P78357 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.17□□□□□ -2.6
CNTNAP1P78357 RNU6-880P-201ENST00000384526 107 ntBASIC-1.17□□□□□ -2.6
CNTNAP1P78357 FGF7P7-201ENST00000514120 227 ntBASIC-1.17□□□□□ -2.6
CNTNAP1P78357 MIR4439-201ENST00000583746 80 ntBASIC-1.17□□□□□ -2.6
CNTNAP1P78357 snoR1.1-201ENST00000628177 80 ntBASIC-1.17□□□□□ -2.6
CNTNAP1P78357 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.18□□□□□ -2.6
CNTNAP1P78357 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.18□□□□□ -2.6
CNTNAP1P78357 RNU6-694P-201ENST00000364071 147 ntBASIC-1.18□□□□□ -2.6
CNTNAP1P78357 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.18□□□□□ -2.6
CNTNAP1P78357 RNU6-592P-201ENST00000411333 103 ntBASIC-1.18□□□□□ -2.6
CNTNAP1P78357 AC022137.1-201ENST00000483735 151 ntBASIC-1.18□□□□□ -2.6
CNTNAP1P78357 SNORA63.2-201ENST00000362603 126 ntBASIC-1.19□□□□□ -2.6
CNTNAP1P78357 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.19□□□□□ -2.6
CNTNAP1P78357 RNU6-540P-201ENST00000384622 101 ntBASIC-1.19□□□□□ -2.6
CNTNAP1P78357 MIR517B-201ENST00000385102 67 ntBASIC-1.19□□□□□ -2.6
CNTNAP1P78357 RNU7-85P-201ENST00000458851 63 ntBASIC-1.19□□□□□ -2.6
CNTNAP1P78357 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.19□□□□□ -2.6
CNTNAP1P78357 MIR4679-2-201ENST00000578358 77 ntBASIC-1.19□□□□□ -2.6
CNTNAP1P78357 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.19□□□□□ -2.6
CNTNAP1P78357 RNU6-495P-201ENST00000362995 107 ntBASIC-1.2□□□□□ -2.6
CNTNAP1P78357 RNU6-832P-201ENST00000363319 107 ntBASIC-1.2□□□□□ -2.6
CNTNAP1P78357 SNORD115-23-201ENST00000364461 82 ntBASIC-1.2□□□□□ -2.6
CNTNAP1P78357 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.2□□□□□ -2.6
CNTNAP1P78357 MIRLET7B-201ENST00000385140 83 ntBASIC-1.2□□□□□ -2.6
CNTNAP1P78357 MIR548U-201ENST00000390728 81 ntBASIC-1.2□□□□□ -2.6
CNTNAP1P78357 AL513043.2-201ENST00000573941 143 ntBASIC-1.2□□□□□ -2.6
CNTNAP1P78357 MIR4770-201ENST00000579149 58 ntBASIC-1.2□□□□□ -2.6
CNTNAP1P78357 RNY3P2-201ENST00000362918 102 ntBASIC-1.21□□□□□ -2.6
CNTNAP1P78357 RNU6-463P-201ENST00000384340 107 ntBASIC-1.21□□□□□ -2.6
CNTNAP1P78357 MIR569-201ENST00000385228 96 ntBASIC-1.21□□□□□ -2.6
CNTNAP1P78357 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.21□□□□□ -2.6
CNTNAP1P78357 RNU6-983P-201ENST00000516004 103 ntBASIC-1.21□□□□□ -2.6
CNTNAP1P78357 RNU6-719P-201ENST00000516671 104 ntBASIC-1.21□□□□□ -2.6
CNTNAP1P78357 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.21□□□□□ -2.6
CNTNAP1P78357 RNY4P7-201ENST00000364600 96 ntBASIC-1.21□□□□□ -2.6
CNTNAP1P78357 MIR496-201ENST00000385226 102 ntBASIC-1.21□□□□□ -2.6
CNTNAP1P78357 AP000533.3-201ENST00000447704 118 ntBASIC-1.21□□□□□ -2.6
CNTNAP1P78357 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.21□□□□□ -2.6
CNTNAP1P78357 AC004792.1-201ENST00000614523 137 ntBASIC-1.21□□□□□ -2.6
CNTNAP1P78357 AL445584.3-201ENST00000617173 78 ntBASIC-1.21□□□□□ -2.6
CNTNAP1P78357 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.22□□□□□ -2.61
CNTNAP1P78357 RNU6-574P-201ENST00000384265 107 ntBASIC-1.22□□□□□ -2.61
CNTNAP1P78357 MIR8485-201ENST00000401372 91 ntBASIC-1.22□□□□□ -2.61
CNTNAP1P78357 MIR8068-201ENST00000618032 68 ntBASIC-1.22□□□□□ -2.61
CNTNAP1P78357 RNU6-132P-201ENST00000383863 107 ntBASIC-1.23□□□□□ -2.61
CNTNAP1P78357 SNORD64-201ENST00000386683 67 ntBASIC-1.23□□□□□ -2.61
CNTNAP1P78357 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
CNTNAP1P78357 RNU7-24P-201ENST00000458867 62 ntBASIC-1.23□□□□□ -2.61
CNTNAP1P78357 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.23□□□□□ -2.61
CNTNAP1P78357 RNU6-379P-201ENST00000363813 104 ntBASIC-1.24□□□□□ -2.61
CNTNAP1P78357 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.24□□□□□ -2.61
CNTNAP1P78357 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.24□□□□□ -2.61
CNTNAP1P78357 RNU6-644P-201ENST00000391155 98 ntBASIC-1.24□□□□□ -2.61
CNTNAP1P78357 RNU6-337P-201ENST00000391243 106 ntBASIC-1.24□□□□□ -2.61
CNTNAP1P78357 MIR3144-201ENST00000579460 79 ntBASIC-1.24□□□□□ -2.61
CNTNAP1P78357 MIR3064-201ENST00000581130 66 ntBASIC-1.24□□□□□ -2.61
CNTNAP1P78357 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.25□□□□□ -2.61
CNTNAP1P78357 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.25□□□□□ -2.61
CNTNAP1P78357 SNORA62.4-201ENST00000365504 151 ntBASIC-1.25□□□□□ -2.61
CNTNAP1P78357 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.25□□□□□ -2.61
CNTNAP1P78357 AC068339.1-201ENST00000526965 141 ntBASIC-1.25□□□□□ -2.61
CNTNAP1P78357 SNORD45B-201ENST00000364617 72 ntBASIC-1.26□□□□□ -2.61
CNTNAP1P78357 SNORA24B-201ENST00000384176 131 ntBASIC-1.26□□□□□ -2.61
CNTNAP1P78357 RNU6-804P-201ENST00000384286 107 ntBASIC-1.26□□□□□ -2.61
CNTNAP1P78357 AC104996.3-201ENST00000590718 94 ntBASIC-1.26□□□□□ -2.61
CNTNAP1P78357 MIR382-201ENST00000637119 76 ntBASIC-1.26□□□□□ -2.61
CNTNAP1P78357 MT-TG-201ENST00000387429 68 ntBASIC-1.27□□□□□ -2.61
CNTNAP1P78357 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.27□□□□□ -2.61
CNTNAP1P78357 SNORD75.2-201ENST00000408784 58 ntBASIC-1.27□□□□□ -2.61
CNTNAP1P78357 snoU83B.1-201ENST00000517136 88 ntBASIC-1.27□□□□□ -2.61
CNTNAP1P78357 MIR3140-201ENST00000583685 90 ntBASIC-1.27□□□□□ -2.61
CNTNAP1P78357 AL035470.1-201ENST00000622571 220 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms