Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RNA5SP458-201ENST00000516188 119 ntBASIC1.41□□□□□ -2.18
RNF144AP50876 SCARNA17.3-201ENST00000516381 125 ntBASIC1.41□□□□□ -2.18
RNF144AP50876 MIR4303-201ENST00000581299 66 ntBASIC1.41□□□□□ -2.18
RNF144AP50876 uc_338.10-201ENST00000621872 182 ntBASIC1.41□□□□□ -2.18
RNF144AP50876 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.18
RNF144AP50876 SNORA17.3-201ENST00000391159 129 ntBASIC1.4□□□□□ -2.19
RNF144AP50876 AC006210.1-201ENST00000424882 111 ntBASIC1.4□□□□□ -2.19
RNF144AP50876 AL354695.1-201ENST00000427935 228 ntBASIC1.4□□□□□ -2.19
RNF144AP50876 AC011195.1-201ENST00000578177 177 ntBASIC1.4□□□□□ -2.19
RNF144AP50876 MIR18A-201ENST00000362310 71 ntBASIC1.39□□□□□ -2.19
RNF144AP50876 SNORA33.1-201ENST00000364957 130 ntBASIC1.39□□□□□ -2.19
RNF144AP50876 SNORD114-24-201ENST00000365029 72 ntBASIC1.39□□□□□ -2.19
RNF144AP50876 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
RNF144AP50876 AL603825.1-201ENST00000438481 80 ntBASIC1.39□□□□□ -2.19
RNF144AP50876 U2.7-201ENST00000619197 100 ntBASIC1.39□□□□□ -2.19
RNF144AP50876 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.38□□□□□ -2.19
RNF144AP50876 RNU6-698P-201ENST00000363523 107 ntBASIC1.38□□□□□ -2.19
RNF144AP50876 RNU6-34P-201ENST00000364874 107 ntBASIC1.38□□□□□ -2.19
RNF144AP50876 SNORA63.6-201ENST00000364921 119 ntBASIC1.38□□□□□ -2.19
RNF144AP50876 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RNF144AP50876 SNORD110-201ENST00000408189 75 ntBASIC1.38□□□□□ -2.19
RNF144AP50876 SNORD99-201ENST00000408612 74 ntBASIC1.38□□□□□ -2.19
RNF144AP50876 Y_RNA.633-201ENST00000459107 95 ntBASIC1.38□□□□□ -2.19
RNF144AP50876 RNA5SP268-201ENST00000516828 124 ntBASIC1.38□□□□□ -2.19
RNF144AP50876 Y_RNA.722-201ENST00000517279 114 ntBASIC1.38□□□□□ -2.19
RNF144AP50876 MIR4473-201ENST00000583731 91 ntBASIC1.38□□□□□ -2.19
RNF144AP50876 Y_RNA.125-201ENST00000363371 111 ntBASIC1.37□□□□□ -2.19
RNF144AP50876 RNU7-174P-201ENST00000516248 59 ntBASIC1.37□□□□□ -2.19
RNF144AP50876 RNA5SP255-201ENST00000516370 107 ntBASIC1.37□□□□□ -2.19
RNF144AP50876 SNORD53B-201ENST00000577887 78 ntBASIC1.37□□□□□ -2.19
RNF144AP50876 MIR7978-201ENST00000636158 59 ntBASIC1.37□□□□□ -2.19
RNF144AP50876 SNORA36.1-201ENST00000363424 132 ntBASIC1.36□□□□□ -2.19
RNF144AP50876 SNORA67.6-201ENST00000391093 99 ntBASIC1.36□□□□□ -2.19
RNF144AP50876 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
RNF144AP50876 MIR548AE1-201ENST00000583292 70 ntBASIC1.36□□□□□ -2.19
RNF144AP50876 SNORA25.8-201ENST00000364831 128 ntBASIC1.35□□□□□ -2.19
RNF144AP50876 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
RNF144AP50876 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
RNF144AP50876 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
RNF144AP50876 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
RNF144AP50876 AC108667.1-201ENST00000428618 249 ntBASIC1.34□□□□□ -2.19
RNF144AP50876 RNA5SP404-201ENST00000517118 132 ntBASIC1.34□□□□□ -2.19
RNF144AP50876 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
RNF144AP50876 RNU4-45P-201ENST00000365469 141 ntBASIC1.33□□□□□ -2.2
RNF144AP50876 MIR582-201ENST00000365731 98 ntBASIC1.33□□□□□ -2.2
RNF144AP50876 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
RNF144AP50876 RNU6-808P-201ENST00000391233 108 ntBASIC1.33□□□□□ -2.2
RNF144AP50876 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
RNF144AP50876 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
RNF144AP50876 U4.4-201ENST00000620626 117 ntBASIC1.33□□□□□ -2.2
RNF144AP50876 SNORD113-4-201ENST00000364802 75 ntBASIC1.32□□□□□ -2.2
RNF144AP50876 Y_RNA.676-201ENST00000516393 96 ntBASIC1.32□□□□□ -2.2
RNF144AP50876 RNA5SP94-201ENST00000516917 108 ntBASIC1.32□□□□□ -2.2
RNF144AP50876 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.32□□□□□ -2.2
RNF144AP50876 MIR7107-201ENST00000611489 80 ntBASIC1.32□□□□□ -2.2
RNF144AP50876 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
RNF144AP50876 MIR378A-201ENST00000362177 66 ntBASIC1.31□□□□□ -2.2
RNF144AP50876 MIR26B-201ENST00000362251 77 ntBASIC1.31□□□□□ -2.2
RNF144AP50876 RNU1-124P-201ENST00000363861 145 ntBASIC1.31□□□□□ -2.2
RNF144AP50876 Y_RNA.338-201ENST00000365320 114 ntBASIC1.31□□□□□ -2.2
RNF144AP50876 RNU6-936P-201ENST00000384005 107 ntBASIC1.31□□□□□ -2.2
RNF144AP50876 MIR548E-201ENST00000408287 88 ntBASIC1.31□□□□□ -2.2
RNF144AP50876 RNU4-62P-201ENST00000410125 130 ntBASIC1.31□□□□□ -2.2
RNF144AP50876 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
RNF144AP50876 RNA5SP222-201ENST00000411039 105 ntBASIC1.3□□□□□ -2.2
RNF144AP50876 MIR4498-201ENST00000577599 66 ntBASIC1.29□□□□□ -2.2
RNF144AP50876 U6.96-201ENST00000636425 70 ntBASIC1.29□□□□□ -2.2
RNF144AP50876 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.28□□□□□ -2.2
RNF144AP50876 SNORA70.25-201ENST00000612741 95 ntBASIC1.28□□□□□ -2.2
RNF144AP50876 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.28□□□□□ -2.2
RNF144AP50876 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
RNF144AP50876 Y_RNA.246-201ENST00000364495 108 ntBASIC1.27□□□□□ -2.21
RNF144AP50876 AP1B1P2-201ENST00000416196 106 ntBASIC1.27□□□□□ -2.21
RNF144AP50876 CYP3A54P-201ENST00000566950 75 ntBASIC1.27□□□□□ -2.21
RNF144AP50876 MIR4752-201ENST00000579672 72 ntBASIC1.27□□□□□ -2.21
RNF144AP50876 snoU13.31-201ENST00000607291 104 ntBASIC1.27□□□□□ -2.21
RNF144AP50876 RNU6-1312P-201ENST00000362425 108 ntBASIC1.25□□□□□ -2.21
RNF144AP50876 Y_RNA.325-201ENST00000365171 122 ntBASIC1.24□□□□□ -2.21
RNF144AP50876 RNU6-520P-201ENST00000384717 104 ntBASIC1.24□□□□□ -2.21
RNF144AP50876 MIR516B1-201ENST00000385211 90 ntBASIC1.24□□□□□ -2.21
RNF144AP50876 RNU7-95P-201ENST00000459222 64 ntBASIC1.24□□□□□ -2.21
RNF144AP50876 SNORA9.1-201ENST00000362412 131 ntBASIC1.23□□□□□ -2.21
RNF144AP50876 RNU6-1184P-201ENST00000384588 108 ntBASIC1.23□□□□□ -2.21
RNF144AP50876 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.23□□□□□ -2.21
RNF144AP50876 AC243829.6-201ENST00000612652 106 ntBASIC1.23□□□□□ -2.21
RNF144AP50876 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
RNF144AP50876 HMGN2P22-201ENST00000427588 175 ntBASIC1.22□□□□□ -2.21
RNF144AP50876 RNU6-1053P-201ENST00000515930 101 ntBASIC1.22□□□□□ -2.21
RNF144AP50876 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
RNF144AP50876 MIR20A-201ENST00000362279 71 ntBASIC1.21□□□□□ -2.22
RNF144AP50876 SNORA36.2-201ENST00000384004 127 ntBASIC1.21□□□□□ -2.22
RNF144AP50876 SNORA41B-201ENST00000384785 128 ntBASIC1.21□□□□□ -2.22
RNF144AP50876 RNA5SP247-201ENST00000411181 105 ntBASIC1.21□□□□□ -2.22
RNF144AP50876 AL021921.1-201ENST00000442774 93 ntBASIC1.21□□□□□ -2.22
RNF144AP50876 MIR4421-201ENST00000578133 69 ntBASIC1.21□□□□□ -2.22
RNF144AP50876 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
RNF144AP50876 AC244090.1-201ENST00000441884 93 ntBASIC1.2□□□□□ -2.22
RNF144AP50876 RNU6-518P-201ENST00000516056 96 ntBASIC1.2□□□□□ -2.22
RNF144AP50876 AL353765.1-201ENST00000605514 183 ntBASIC1.2□□□□□ -2.22
RNF144AP50876 Y_RNA.164-201ENST00000363709 102 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms