Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RNU6-557P-201ENST00000516842 110 ntBASIC0.27□□□□□ -2.37
CLK1P49759 MIR548AD-201ENST00000584780 82 ntBASIC0.27□□□□□ -2.37
CLK1P49759 MIR6515-201ENST00000619843 57 ntBASIC0.27□□□□□ -2.37
CLK1P49759 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CLK1P49759 RNU6-208P-201ENST00000362431 107 ntBASIC0.26□□□□□ -2.37
CLK1P49759 RNU6-495P-201ENST00000362995 107 ntBASIC0.26□□□□□ -2.37
CLK1P49759 SNORD77.2-201ENST00000391045 68 ntBASIC0.26□□□□□ -2.37
CLK1P49759 RNU6-1108P-201ENST00000516308 104 ntBASIC0.26□□□□□ -2.37
CLK1P49759 MIR4666B-201ENST00000578142 81 ntBASIC0.26□□□□□ -2.37
CLK1P49759 MIR4473-201ENST00000583731 91 ntBASIC0.26□□□□□ -2.37
CLK1P49759 MIR4677-201ENST00000584153 80 ntBASIC0.26□□□□□ -2.37
CLK1P49759 U6.81-201ENST00000612550 106 ntBASIC0.26□□□□□ -2.37
CLK1P49759 RNA5SP62-201ENST00000363457 110 ntBASIC0.25□□□□□ -2.37
CLK1P49759 Y_RNA.316-201ENST00000365118 111 ntBASIC0.25□□□□□ -2.37
CLK1P49759 AC097510.1-201ENST00000510945 133 ntBASIC0.25□□□□□ -2.37
CLK1P49759 AC069113.3-201ENST00000521019 150 ntBASIC0.25□□□□□ -2.37
CLK1P49759 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
CLK1P49759 RNU6-161P-201ENST00000363051 106 ntBASIC0.24□□□□□ -2.37
CLK1P49759 RNA5SP173-201ENST00000364857 136 ntBASIC0.24□□□□□ -2.37
CLK1P49759 RNU6-382P-201ENST00000365181 106 ntBASIC0.24□□□□□ -2.37
CLK1P49759 Y_RNA.407-201ENST00000383986 113 ntBASIC0.24□□□□□ -2.37
CLK1P49759 RNU6-242P-201ENST00000384359 107 ntBASIC0.24□□□□□ -2.37
CLK1P49759 RNU6-129P-201ENST00000391022 107 ntBASIC0.24□□□□□ -2.37
CLK1P49759 SNORD75.2-201ENST00000408784 58 ntBASIC0.24□□□□□ -2.37
CLK1P49759 Y_RNA.606-201ENST00000410579 103 ntBASIC0.24□□□□□ -2.37
CLK1P49759 AC073261.1-201ENST00000429409 121 ntBASIC0.24□□□□□ -2.37
CLK1P49759 RNU7-24P-201ENST00000458867 62 ntBASIC0.24□□□□□ -2.37
CLK1P49759 U7.6-201ENST00000610841 64 ntBASIC0.24□□□□□ -2.37
CLK1P49759 MIR499B-201ENST00000636498 73 ntBASIC0.24□□□□□ -2.37
CLK1P49759 MIRLET7A1-201ENST00000362295 80 ntBASIC0.23□□□□□ -2.37
CLK1P49759 Y_RNA.355-201ENST00000365462 98 ntBASIC0.23□□□□□ -2.37
CLK1P49759 MIR598-201ENST00000384868 97 ntBASIC0.23□□□□□ -2.37
CLK1P49759 RNU6-127P-201ENST00000390897 107 ntBASIC0.23□□□□□ -2.37
CLK1P49759 Y_RNA.660-201ENST00000516002 120 ntBASIC0.23□□□□□ -2.37
CLK1P49759 SNORA9.1-201ENST00000362412 131 ntBASIC0.22□□□□□ -2.37
CLK1P49759 Y_RNA.264-201ENST00000364665 102 ntBASIC0.22□□□□□ -2.37
CLK1P49759 RNU6-573P-201ENST00000383938 106 ntBASIC0.22□□□□□ -2.37
CLK1P49759 Y_RNA.532-201ENST00000384590 113 ntBASIC0.22□□□□□ -2.37
CLK1P49759 MIR652-201ENST00000385278 98 ntBASIC0.22□□□□□ -2.37
CLK1P49759 RNA5SP436-201ENST00000516020 115 ntBASIC0.22□□□□□ -2.37
CLK1P49759 RNU7-129P-201ENST00000516128 62 ntBASIC0.22□□□□□ -2.37
CLK1P49759 MIR3925-201ENST00000584674 77 ntBASIC0.22□□□□□ -2.37
CLK1P49759 RNU6-340P-201ENST00000364005 107 ntBASIC0.21□□□□□ -2.38
CLK1P49759 RNU6-686P-201ENST00000364839 107 ntBASIC0.21□□□□□ -2.38
CLK1P49759 MIR548H2-201ENST00000408874 88 ntBASIC0.21□□□□□ -2.38
CLK1P49759 MIR4712-201ENST00000583750 82 ntBASIC0.21□□□□□ -2.38
CLK1P49759 Y_RNA.12-201ENST00000362393 112 ntBASIC0.2□□□□□ -2.38
CLK1P49759 RNU6-315P-201ENST00000362666 107 ntBASIC0.2□□□□□ -2.38
CLK1P49759 Y_RNA.94-201ENST00000363068 106 ntBASIC0.2□□□□□ -2.38
CLK1P49759 SNORD114-23-201ENST00000363536 72 ntBASIC0.2□□□□□ -2.38
CLK1P49759 Y_RNA.313-201ENST00000365095 103 ntBASIC0.2□□□□□ -2.38
CLK1P49759 RNU6-652P-201ENST00000365488 107 ntBASIC0.2□□□□□ -2.38
CLK1P49759 RNU6-154P-201ENST00000384306 106 ntBASIC0.2□□□□□ -2.38
CLK1P49759 SNORA40.17-201ENST00000517256 115 ntBASIC0.2□□□□□ -2.38
CLK1P49759 MIR4773-1-201ENST00000637203 78 ntBASIC0.2□□□□□ -2.38
CLK1P49759 MIR582-201ENST00000365731 98 ntBASIC0.19□□□□□ -2.38
CLK1P49759 MIR516B1-201ENST00000385211 90 ntBASIC0.19□□□□□ -2.38
CLK1P49759 MIR876-201ENST00000401147 81 ntBASIC0.19□□□□□ -2.38
CLK1P49759 SCARNA17.3-201ENST00000516381 125 ntBASIC0.19□□□□□ -2.38
CLK1P49759 RNU6-782P-201ENST00000516852 104 ntBASIC0.19□□□□□ -2.38
CLK1P49759 YWHAEP3-201ENST00000582767 121 ntBASIC0.19□□□□□ -2.38
CLK1P49759 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.19□□□□□ -2.38
CLK1P49759 uc_338.10-201ENST00000621872 182 ntBASIC0.19□□□□□ -2.38
CLK1P49759 MIR1245B-201ENST00000636115 69 ntBASIC0.19□□□□□ -2.38
CLK1P49759 MIR4315-1-201ENST00000636800 73 ntBASIC0.19□□□□□ -2.38
CLK1P49759 MIR4315-2-201ENST00000640925 73 ntBASIC0.19□□□□□ -2.38
CLK1P49759 RNU6-228P-201ENST00000362700 106 ntBASIC0.18□□□□□ -2.38
CLK1P49759 Y_RNA.219-201ENST00000364232 113 ntBASIC0.18□□□□□ -2.38
CLK1P49759 Y_RNA.371-201ENST00000365591 113 ntBASIC0.18□□□□□ -2.38
CLK1P49759 AC074348.1-201ENST00000426503 132 ntBASIC0.18□□□□□ -2.38
CLK1P49759 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CLK1P49759 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.18□□□□□ -2.38
CLK1P49759 SNORA42.1-201ENST00000363515 137 ntBASIC0.17□□□□□ -2.38
CLK1P49759 RNU6-990P-201ENST00000364385 104 ntBASIC0.17□□□□□ -2.38
CLK1P49759 MIR548E-201ENST00000408287 88 ntBASIC0.17□□□□□ -2.38
CLK1P49759 RNU7-188P-201ENST00000517063 64 ntBASIC0.17□□□□□ -2.38
CLK1P49759 RNU6-303P-201ENST00000517091 106 ntBASIC0.17□□□□□ -2.38
CLK1P49759 MIR3202-2-201ENST00000635980 79 ntBASIC0.17□□□□□ -2.38
CLK1P49759 AC010487.4-201ENST00000637027 61 ntBASIC0.17□□□□□ -2.38
CLK1P49759 RNU6-1039P-201ENST00000383931 107 ntBASIC0.16□□□□□ -2.38
CLK1P49759 RNU6-175P-201ENST00000516896 107 ntBASIC0.16□□□□□ -2.38
CLK1P49759 RN7SL660P-201ENST00000614852 299 ntBASIC0.16□□□□□ -2.38
CLK1P49759 AC084368.1-201ENST00000620935 65 ntBASIC0.16□□□□□ -2.38
CLK1P49759 SNORD114-4-201ENST00000363962 75 ntBASIC0.15□□□□□ -2.39
CLK1P49759 RNU6-1124P-201ENST00000384169 107 ntBASIC0.15□□□□□ -2.39
CLK1P49759 MIR643-201ENST00000385267 97 ntBASIC0.15□□□□□ -2.39
CLK1P49759 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
CLK1P49759 RNU6-274P-201ENST00000459566 107 ntBASIC0.15□□□□□ -2.39
CLK1P49759 SNORA72.7-201ENST00000516349 94 ntBASIC0.15□□□□□ -2.39
CLK1P49759 RNU6-752P-201ENST00000516376 102 ntBASIC0.15□□□□□ -2.39
CLK1P49759 RNA5SP395-201ENST00000516567 118 ntBASIC0.15□□□□□ -2.39
CLK1P49759 SCARNA11.2-201ENST00000517183 154 ntBASIC0.15□□□□□ -2.39
CLK1P49759 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.15□□□□□ -2.39
CLK1P49759 Y_RNA.36-201ENST00000362602 112 ntBASIC0.14□□□□□ -2.39
CLK1P49759 RNU6-330P-201ENST00000363015 107 ntBASIC0.14□□□□□ -2.39
CLK1P49759 SNORD114-29-201ENST00000364819 70 ntBASIC0.14□□□□□ -2.39
CLK1P49759 SNORA49-201ENST00000386157 136 ntBASIC0.14□□□□□ -2.39
CLK1P49759 SNORD78.1-201ENST00000390866 65 ntBASIC0.14□□□□□ -2.39
CLK1P49759 SNORA75.1-201ENST00000391130 148 ntBASIC0.14□□□□□ -2.39
CLK1P49759 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 219.9 ms