Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.69□□□□□ -2.3
THBS3P49746 MIR4698-201ENST00000577795 80 ntBASIC0.69□□□□□ -2.3
THBS3P49746 MIR4661-201ENST00000582720 75 ntBASIC0.69□□□□□ -2.3
THBS3P49746 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
THBS3P49746 RNU1-141P-201ENST00000364623 158 ntBASIC0.68□□□□□ -2.3
THBS3P49746 MIR154-201ENST00000385243 84 ntBASIC0.68□□□□□ -2.3
THBS3P49746 MT-TY-201ENST00000387409 66 ntBASIC0.68□□□□□ -2.3
THBS3P49746 RNA5SP484-201ENST00000458857 111 ntBASIC0.68□□□□□ -2.3
THBS3P49746 SNORD42B-201ENST00000458893 67 ntBASIC0.68□□□□□ -2.3
THBS3P49746 MIR4460-201ENST00000577862 86 ntBASIC0.68□□□□□ -2.3
THBS3P49746 AL162376.1-201ENST00000624117 175 ntBASIC0.68□□□□□ -2.3
THBS3P49746 Y_RNA.205-201ENST00000364128 113 ntBASIC0.67□□□□□ -2.3
THBS3P49746 SNORD115-31-201ENST00000365318 82 ntBASIC0.67□□□□□ -2.3
THBS3P49746 AL691482.2-201ENST00000457453 84 ntBASIC0.67□□□□□ -2.3
THBS3P49746 RNU7-24P-201ENST00000458867 62 ntBASIC0.67□□□□□ -2.3
THBS3P49746 RNU6-351P-201ENST00000516097 100 ntBASIC0.67□□□□□ -2.3
THBS3P49746 RNU6-539P-201ENST00000516665 103 ntBASIC0.67□□□□□ -2.3
THBS3P49746 RNA5SP268-201ENST00000516828 124 ntBASIC0.67□□□□□ -2.3
THBS3P49746 CYP3A137P-201ENST00000562436 69 ntBASIC0.67□□□□□ -2.3
THBS3P49746 MIR7107-201ENST00000611489 80 ntBASIC0.67□□□□□ -2.3
THBS3P49746 MIR6779-201ENST00000617283 64 ntBASIC0.67□□□□□ -2.3
THBS3P49746 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
THBS3P49746 SNORD45.1-201ENST00000363181 77 ntBASIC0.66□□□□□ -2.3
THBS3P49746 RNU4-45P-201ENST00000365469 141 ntBASIC0.66□□□□□ -2.3
THBS3P49746 SNORA8.2-201ENST00000384372 139 ntBASIC0.66□□□□□ -2.3
THBS3P49746 MIR203A-201ENST00000384836 110 ntBASIC0.66□□□□□ -2.3
THBS3P49746 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.66□□□□□ -2.3
THBS3P49746 RNU6-752P-201ENST00000516376 102 ntBASIC0.66□□□□□ -2.3
THBS3P49746 RNU5B-6P-201ENST00000516765 68 ntBASIC0.66□□□□□ -2.3
THBS3P49746 MIR5000-201ENST00000577717 103 ntBASIC0.66□□□□□ -2.3
THBS3P49746 PVT1_3.1-201ENST00000620853 95 ntBASIC0.66□□□□□ -2.3
THBS3P49746 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
THBS3P49746 RNU6-590P-201ENST00000365039 107 ntBASIC0.65□□□□□ -2.31
THBS3P49746 RNU6-1039P-201ENST00000383931 107 ntBASIC0.65□□□□□ -2.31
THBS3P49746 SNORA36.2-201ENST00000384004 127 ntBASIC0.65□□□□□ -2.31
THBS3P49746 SNORD45A-201ENST00000384512 84 ntBASIC0.65□□□□□ -2.31
THBS3P49746 RNU6-540P-201ENST00000384622 101 ntBASIC0.65□□□□□ -2.31
THBS3P49746 RNU6-604P-201ENST00000390917 100 ntBASIC0.65□□□□□ -2.31
THBS3P49746 MIR6509-201ENST00000614603 85 ntBASIC0.65□□□□□ -2.31
THBS3P49746 SNORD115-22-201ENST00000364456 82 ntBASIC0.64□□□□□ -2.31
THBS3P49746 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
THBS3P49746 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.64□□□□□ -2.31
THBS3P49746 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.64□□□□□ -2.31
THBS3P49746 RNA5SP436-201ENST00000516020 115 ntBASIC0.64□□□□□ -2.31
THBS3P49746 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
THBS3P49746 MIR608-201ENST00000384820 100 ntBASIC0.63□□□□□ -2.31
THBS3P49746 MIR216A-201ENST00000385063 110 ntBASIC0.63□□□□□ -2.31
THBS3P49746 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.63□□□□□ -2.31
THBS3P49746 PSMC1P5-201ENST00000512850 177 ntBASIC0.63□□□□□ -2.31
THBS3P49746 MIR4752-201ENST00000579672 72 ntBASIC0.63□□□□□ -2.31
THBS3P49746 RNU6-990P-201ENST00000364385 104 ntBASIC0.62□□□□□ -2.31
THBS3P49746 RNA5SP517-201ENST00000364724 117 ntBASIC0.62□□□□□ -2.31
THBS3P49746 RNU6-649P-201ENST00000384463 107 ntBASIC0.62□□□□□ -2.31
THBS3P49746 MIR140-201ENST00000385282 100 ntBASIC0.62□□□□□ -2.31
THBS3P49746 SNORD30.1-201ENST00000391309 70 ntBASIC0.62□□□□□ -2.31
THBS3P49746 SNORA25.18-201ENST00000607153 114 ntBASIC0.62□□□□□ -2.31
THBS3P49746 MIR8053-201ENST00000613344 75 ntBASIC0.62□□□□□ -2.31
THBS3P49746 AC069503.3-201ENST00000618674 145 ntBASIC0.62□□□□□ -2.31
THBS3P49746 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
THBS3P49746 RNU6-881P-201ENST00000516813 102 ntBASIC0.61□□□□□ -2.31
THBS3P49746 SNORA40.17-201ENST00000517256 115 ntBASIC0.61□□□□□ -2.31
THBS3P49746 MIR3657-201ENST00000584818 117 ntBASIC0.61□□□□□ -2.31
THBS3P49746 SNORA70.25-201ENST00000612741 95 ntBASIC0.61□□□□□ -2.31
THBS3P49746 AC073869.9-201ENST00000641610 120 ntBASIC0.61□□□□□ -2.31
THBS3P49746 SNORD113.1-201ENST00000363280 73 ntBASIC0.6□□□□□ -2.31
THBS3P49746 Y_RNA.386-201ENST00000383913 105 ntBASIC0.6□□□□□ -2.31
THBS3P49746 Y_RNA.540-201ENST00000384638 111 ntBASIC0.6□□□□□ -2.31
THBS3P49746 RNU6-663P-201ENST00000391105 106 ntBASIC0.6□□□□□ -2.31
THBS3P49746 AC006210.1-201ENST00000424882 111 ntBASIC0.6□□□□□ -2.31
THBS3P49746 RN7SL793P-201ENST00000583259 296 ntBASIC0.6□□□□□ -2.31
THBS3P49746 MIR4473-201ENST00000583731 91 ntBASIC0.6□□□□□ -2.31
THBS3P49746 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.6□□□□□ -2.31
THBS3P49746 RNU6-260P-201ENST00000384092 107 ntBASIC0.59□□□□□ -2.31
THBS3P49746 RNU6-895P-201ENST00000384125 103 ntBASIC0.59□□□□□ -2.31
THBS3P49746 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
THBS3P49746 SNORD110-201ENST00000408189 75 ntBASIC0.59□□□□□ -2.31
THBS3P49746 AC069271.1-201ENST00000445577 156 ntBASIC0.59□□□□□ -2.31
THBS3P49746 RNU6-982P-201ENST00000516216 102 ntBASIC0.59□□□□□ -2.31
THBS3P49746 RNA5SP147-201ENST00000516493 109 ntBASIC0.59□□□□□ -2.31
THBS3P49746 MIR4714-201ENST00000580728 77 ntBASIC0.59□□□□□ -2.31
THBS3P49746 MIR548AE1-201ENST00000583292 70 ntBASIC0.59□□□□□ -2.31
THBS3P49746 RNU1-29P-201ENST00000606574 126 ntBASIC0.59□□□□□ -2.31
THBS3P49746 AC092634.7-201ENST00000621022 103 ntBASIC0.59□□□□□ -2.31
THBS3P49746 MIR6835-201ENST00000621552 64 ntBASIC0.59□□□□□ -2.31
THBS3P49746 U6.111-201ENST00000636093 83 ntBASIC0.59□□□□□ -2.31
THBS3P49746 RNU6-800P-201ENST00000384473 103 ntBASIC0.57□□□□□ -2.32
THBS3P49746 SNORD116-24-201ENST00000384549 92 ntBASIC0.57□□□□□ -2.32
THBS3P49746 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.57□□□□□ -2.32
THBS3P49746 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
THBS3P49746 RNU6-1216P-201ENST00000362590 107 ntBASIC0.56□□□□□ -2.32
THBS3P49746 SNORA2.1-201ENST00000363089 137 ntBASIC0.56□□□□□ -2.32
THBS3P49746 SNORD118-201ENST00000363593 134 ntBASIC0.56□□□□□ -2.32
THBS3P49746 Y_RNA.407-201ENST00000383986 113 ntBASIC0.56□□□□□ -2.32
THBS3P49746 MIR652-201ENST00000385278 98 ntBASIC0.56□□□□□ -2.32
THBS3P49746 MIR1265-201ENST00000408444 86 ntBASIC0.56□□□□□ -2.32
THBS3P49746 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.55□□□□□ -2.32
THBS3P49746 SNORD114-4-201ENST00000363962 75 ntBASIC0.55□□□□□ -2.32
THBS3P49746 MIR508-201ENST00000384857 115 ntBASIC0.55□□□□□ -2.32
THBS3P49746 SNORA40.8-201ENST00000411034 126 ntBASIC0.55□□□□□ -2.32
THBS3P49746 HMGN2P22-201ENST00000427588 175 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms